Os11g0157100

From RiceWiki
Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0157100| Description = Similar to Cyclin T1 (Fragment)| Version = NM_001072330.1 GI:115484272 GeneID:4349827| Length = 6516 bp| Definition...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0157100

Description

Similar to Cyclin T1 (Fragment)

Version

NM_001072330.1 GI:115484272 GeneID:4349827

Length

6516 bp

Definition

Oryza sativa Japonica Group Os11g0157100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2713336..2719851

Sequence Coding Region

2715673..2715911,2716602..2716683,2717519..2717653,2717888..2718094

Expression

GEO Profiles:Os11g0157100

Genome Context

<gbrowseImage1> name=NC_008404:2713336..2719851 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2713336..2719851 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatggcatacagacaagtgactcttcacatcatggaattgtagaaaacagcccatatagaactccctatgatagatatgcagaaggtggtcaacttggtgcttcctggtattttagtagaaaggaaatagaggaaaattccttatcaagaagagatggcattgatttgaaaaaagagtcttatcttcgcaaatcatattgcactttcttgcaggatttagggatgaggcttaaagtgcctcaagtgacaattgctacagccatcgtgttttgtcatcgttttttccttcgtcaatctcatgcaaaaaatgatagacggacaatcgccacagtttgcatgttcttggcgggaaaagttgaagaaacacccagacccctgaaagatgtcatactcatttcctatgaaatcatccacaaaaaggatgctgctgctgttcagcgaattaagcagaaggaagtatatgaacagcagaaggagcttattttacttggggagcgtgttgtgcttgtaacacttggttttgatctgaacgtgcaccatccgtacaagcccttggttgaagcaataaagaaattcaaggttgctcaaaatgcacttgctcaagttgcctggaattttgtcaacgatgggtatgctaaaattactcttctccttacataa</cdnaseq>

Protein Sequence

<aaseq>MDGIQTSDSSHHGIVENSPYRTPYDRYAEGGQLGASWYFSRKEI EENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHA KNDRRTIATVCMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIKQKEVYEQQKE LILLGERVVLVTLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGYAKITLL LT</aaseq>

Gene Sequence

<dnaseqindica>2338..2576#3267..3348#4184..4318#4553..4759#gaaccaacctagggttcgcgtcgcgacccacctccacctcccccgcagcttcccccacctcgacgccgccgcctccccgcgccgcgcctctccggcgaaagcgctgcgcgtgcctgcctcccgtctcgcccgcagtcacggatcgaggaggcctcggcttcggcttccgcgtgtggatagggtttcgaccccccctcaggtacccatccgatcccatctctgattcgctttttctttcgttgcttgaatcgcgtccaggctgtcgcctcgtctgctcgggacctgccgattgcgagatcgggtgcttcgtagcacgattcgtggaccgtacctacgcgtcgtcgcccggcagcggtaaccctagttttccggggattccctagcgattgcagcttaatttgatgctattggaattggatatgcttagatttcgcctcagtcgcgccaggttttcgagtaatttgtcatctgtttggtgggggtggggtagagctggggagggtttcaatgtagcgaatttcatcgggggatttgtgatgaccgattgtcaatcaagtatttgtgctcagtgcttatagaaattgtgcgttttactcgtggactgacttaacaacggtgtattttggtaggtcagaccggtttatgattatttgtctatgcacttccgctgactggtctgtactacgtagtttttaagtgggattcataaattcagcgacatgaaaagatatgttacaccctgtggtttagccagaaagcgacctttaaaattttctcaatctgtaacctgaactcgtccacatgaattgcaatggtggcaaaaccacatccaaaactgtcactggggtttatttgacccgatttagattactcatggttgttaaatacgctgcttccgttattggagggtaaagtaattgaacctccatactttcagggtgttaagtaatccttttcatttattttataatcattatcatccactttttacaagtttgttgaagcatttaacatccatgagtagactatctaaaatttaatctcttgtgaagatggtcttgatggttggaaatctgcacatatggttcgttaatattttgtggacttaatttttcgtcaactggctatatcagttggaaatctgaacatctaatatttttttgtggaatttgtggttcttgcatattattcttgatcttcaagaaattttaatgaaacgtctttaaaccttgcaatttagtgatgggtaccctggtacgcatataatatgaatcactgaacaaaattgtggataacaagaatttttatgtgacccaaagaaaggtttttgttctgttaggctctaaaatctgtttaaaaaaatctagtttggtaaaaccagagattcaaactaccactttggttgaattttggttcagcatttgctctttgctgaacaaagggaatttgtcataaatatgtaattaagatttaagaacactcttttgtttgttattattggctccataaaaaatctgggataaaatcctgtattttagttaggtcccctcattcccttaaaaagcaactcaaaagacagtatgtacactcgaggaaaccctctacctaaagacttgattgatttctttgaaaaactttttattaccgtatgggaaagtcacccaacactctctctgtaaggatagagaaaagaacaacagacaacaagaccaaatccaactgttcttcctcttcttctttttttcgtctatgtataagcttcttttgaagtggagtgtattatgctaatgtgcaccacggcatggagtttagatgaaatcccggtggacctttgggctgctttatctcatcccactgcagaattattgctttatctcattccactacagaattgttatattatatagcacccatgtgcttgaaattttctgaagtcatcaggattagtttacaggcaattcataggagttgcatgattatgcaaccattttcttgtcatgctccagcaatattttatgacaccctgtatgtcaaattgttcattgtctttcatggaagggtaaaaaaaaaaatcttcttttagatttcatttaactcatcctttggtccatttttttttccttttgagctattcaataatccttctgtgctaaattttaacagtaggacatgtgtttatgcatgttcccagtagcatacaccacacacccacttacgcaatcatacacagttcatgctcatccacctatctattttttaacccttttgatgttaaatttgaaagttaacatttttttacttttcacttcatcaggtaattcacgagggatatcctacatggatggcatacagacaagtgactcttcacatcatggaattgtagaaaacagcccatatagaactccctatgatagatatgcagaaggtggtcaacttggtgcttcctggtattttagtagaaaggaaatagaggaaaattccttatcaagaagagatggcattgatttgaaaaaagagtcttatcttcgcaaatcatattgcactttcttgcaggatttagggatgaggcttaaagtgtaagaatacattaccttatgaatattttatcattaatacttgttttccatgttaatagaactgttgtgtttgacatcgtgatatctcttgccagttctttaaatgttcatttagaaaacattctgtcttttagctcaatttatttgcaagtgccttttctttccctcattactgatgactgatgttaccatgttaataacattcgatgccttatgaattgagccatgttactaagcacttaattgacatgccttagtacaataagatatttaaatgcctgcttattgatttgtcaagcttttaaatcaataaaatgttaatgttatgattttaaatcgtaagtgttgctagtttttatatttcttcatgctaatcttgtatatgtttctgtttcaaatggaattgattccctataaatacaatgcagtgttaggaacaacttattggcactctatgcagtatcaattgacacacagcaaatttgttgcctcaatgagtatagtacaacaccaattcttttctgggaacagaatgtacagcatcgtttactatttagtttcctggatggcctaatagcagtttcattgtaaatgtttgtgtaccactaagtgttcatgtactgcatgttttatgtcctgttgacacttttttgtgacccttggtcctaatgatgaatggctataattcaggcctcaagtgacaattgctacagccatcgtgttttgtcatcgttttttccttcgtcaatctcatgcaaaaaatgatagacgggtaagcattattgaaattttcctatggcacgattataaagaaataatactcatgtgagacagtattttcaattttaccggcaattttgtggaaatagtggtcagtgttatatataaataattaaatagtgatcaatttaaagtacttcctgttttggttgtcactcatttgtggaagaagctaaaatggtttgttaagaacatctgtttttatgttatgatatggttgattacctgatgttgcttggtcctttgaaaacagtcatgcagatctgtattaccttaaaaccggagtcgtcctccttcccttcccaccccatccccacatgtgaaaatatcatgagaaaaaccgttcctagaaaccgagagaaaaatcgctgcaagaaaactggagtccaaacaaaccgagagaaaaaccattaaaaaaatgggtttttatcctggtttttttggagcatgaggttatctctcagtttttccgtgtccaaaataaaaggacaaaaactgttcttgaaaaccgagagataacctcatgctccaagaaaaccaggataaaaaattgagagagaatgtttcaaaaaaacaagagaaaaatatgggataagagaaattttgaccatgttcaccagaaaaatcaagtgaaaatacgggatatgagtgaattgaataggttcatcagatcccattccgttgcaacgcatgacatgttactagctaaagttaattcagatggcagtacattctttttctgtgttgcacgccatacatgatacacaattgctgcttgtcagggtaattcttttctatcaattatttatgttcattataacttgcagacaatcgccacagtttgcatgttcttggcgggaaaagttgaagaaacacccagacccctgaaagatgtcatactcatttcctatgaaatcatccacaaaaaggatgctgctgctgttcagcgaattaagcagaaggtaaaataattggctgagaaatcttttgttggtttccttacctagttacccttattttttcagttgtcagtccaactgttaagcagtgctttctttcttttttcttttctttgtgaagaggggtgcaagttttaaaaattattggtttccttttatatttctttctttaaattcagtctcttgattactttggtgtggaatggcaggtttgactaattttgctgtattctgcaggaagtatatgaacagcagaaggagcttattttacttggggagcgtgttgtgcttgtaacacttggttttgatctgaacgtgcaccatccgtacaagcccttggttgaagcaataaagaaattcaaggttgctcaaaatgcacttgctcaagttgcctggaattttgtcaacgatgggtatgctaaaattactcttctccttacataatagtaatcccctattatgcctatttactacgccttaaaaggggtgtacaggctacgcacttcactttgccttcaatttaagccccaccatattgcggccggcgcaatcttcctggctgcgaagtttctcaaagtcaagcttccatcagatggcgagaaggtctggtggcaagagtttgatgtaaccccacggcagttggaaggttcgtctctagatacaaaggcagtagtgcatttttgcactatcacctattgggctattcaattttcttaaggattcaatttttgcatcccccacaagtagctgcagttgttgccttagattagctatctaggaatcccatgagaattggcagccaaatttcatcttctcaaaaatgatagattatagtggaactaggttgggtcaatggcatgcagagtattgggggagaaatttttaggatacgcaggggaatgccatgtacaggaacatactgggatgaacttgtactggattgcctctaatatggaaatggattttctctttttgttggtgtcacctttgagtgcaactgctttggtagacatcatctgtttggacttatgttaaatctgttcgccagtcctatcttagctagtgttactcttaatggtcttttatttcaaagagagctgacaagcatacatgcatacattgtgcatttattcttattcccttcagaggttagcaaccaaatgttggagctctatgaacaaaaccgtgtggcaccaccaccatcacaagggaatgacactgaaggtagctctgcgagtgtggtcaatcaacgtgcttctgggaaagctccgggatcttctgaagagcctcccacccatgaaaatcacctagcgcccagacagtcgagcacgccaggccaccagggctatgaccaccctcatcctgagaagcagaactcaagccagagggtacctcagaatgatgcaagggatggtactgccaatagcaacgaaggccccaatatgtcatcaacgatggatgcgatgaaaaagatagacaaggataaggtgaaagctgccctggagaaacggaggaaatcgaaaggcgatgttgctaaaaaggttgatatcatggatgatgatgacctaatcgagagggaactggaacatggtgtggaattggctgccgaggacgagaagatcaagcacgagaggaggcagagttggccccattctgcacatcgggaggatcaccaaggcgtcgctcgcctgactgaaaacactgaggaaggtgagttgtccatagacagccaagagtaccgttctccggagcttgacaaccgaaagagaaaggatatgcatgagcacaggaattacgatcgcggtgaaagggaccttaaaaggttaaggtcttgagagtgaaagtgttaatgttcggcacatcacattgaggagcgcgattcgcatagcatcgcatgtgacttgggctatcagatttgtagaacctatttgttgtcactagagcttatgcttatatgtatgtgggagattgaactgtactatatagtttaaaggatggtttccccagagagcgtgtacatgttttagagatgtttaactgttcctgagtcccgacagtgttatgaacattcagaagcagctttaagctgtgaacgatacgaatgagatcatcgcaagacttatatgtatggcccaacgagaaattgttgtaattcggattgctgactcgaggtaatatggaagaacaatgattgttttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0157100, RefSeq:Os11g0157100