BGIOSGA028397

From RiceWiki
Revision as of 07:57, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028397| Description = Peptidyl-prolyl cis-trans isomerase, cyclophilin-| Definition = Oryza sativa Indica Group BGIOSGA028397, complete gene...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028397

Description

Peptidyl-prolyl cis-trans isomerase, cyclophilin-

Definition

Oryza sativa Indica Group BGIOSGA028397, complete gene.

LocusTag

OSJNBB0075O18.114

Ensembl Transcript ID

BGIOSGA028397-TA

Ensembl Protein ID

BGIOSGA028397-PA

Length

450

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:13095386..13095835

Sequence Coding Region

13095386..13095835

Genome Context

<gbrowseImage1> name=IndicaChromosome08:13095386..13095835 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:13095386..13095835 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTTCAGTGTCTGCCCTAGCTACTTTCGCTCTGACCGCACTTTAGGAGCTGAGCTTGCTACATGTCCTGATTCTGAACCTCTTGGTCGTGTAATTTTTGGTTTGTATGGTCGACTCCTCCCCCTCACTACTGCCAACTTCAAAGCTGCTTGCACTTCTGCTGCATACCGGGGAACACTTGTCCACAAGCTCCTTCAGGGCCAGTTCTTCGTTGCTGGCCGCCAAGGTCCTCGGCGTGACAGGGGCGAGGTCCAACCTCCCACCGGACTTGTGAGGAATGCTGAGACTATTGACCCTAAAGCATTTGAACTAAAGCATGCAAGGCCTGGCACCCTCTCATTGTGCCTTGGACAGAACGATGACGATGATGACATCAAGCTCAATCCTAATTATCACAATGTTGAATTCTTGGTTACCACTGGACCAGGGGCCCTGCCCAGAGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MDFSVCPSYFRSDRTLGAELATCPDSEPLGRVIFGLYGRLLPLTTANFKAACTSAAYRGTLVHKLLQGQFFVAGRQGPRRDRGEVQPPTGLVRNAETIDPKAFELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTTGPGALPRA</aaseq>

Gene Sequence

<dnaseqindica>1..450#ATGGACTTCAGTGTCTGCCCTAGCTACTTTCGCTCTGACCGCACTTTAGGAGCTGAGCTTGCTACATGTCCTGATTCTGAACCTCTTGGTCGTGTAATTTTTGGTTTGTATGGTCGACTCCTCCCCCTCACTACTGCCAACTTCAAAGCTGCTTGCACTTCTGCTGCATACCGGGGAACACTTGTCCACAAGCTCCTTCAGGGCCAGTTCTTCGTTGCTGGCCGCCAAGGTCCTCGGCGTGACAGGGGCGAGGTCCAACCTCCCACCGGACTTGTGAGGAATGCTGAGACTATTGACCCTAAAGCATTTGAACTAAAGCATGCAAGGCCTGGCACCCTCTCATTGTGCCTTGGACAGAACGATGACGATGATGACATCAAGCTCAATCCTAATTATCACAATGTTGAATTCTTGGTTACCACTGGACCAGGGGCCCTGCCCAGAGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028397