BGIOSGA028399

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Revision as of 07:57, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028399| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028399, complete gene.| tag = OsI_286...")
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Gene Name

BGIOSGA028399

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028399, complete gene.

LocusTag

OsI_28664

Ensembl Transcript ID

BGIOSGA028399-TA

Ensembl Protein ID

BGIOSGA028399-PA

Length

3768

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:13139582..13143349

Sequence Coding Region

13139582..13139608,13141264..13141384,13141828..13142015,13142102..13142233,13143179..13143349

Genome Context

<gbrowseImage1> name=IndicaChromosome08:13139582..13143349 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:13139582..13143349 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAAATATTATGAAGAGGACTGGACGCACTACGTCTTGCTATTATGTTCGTTTAAAGAGCAGCTACAGCAGCATGTCCGTGTTCATGCTATGGAAGCAGTAATGGCATGCTGGGAACTTGAACAAAACCTTCAGAGTTTGACAGGTGCCTCGCCCGGTGAAGGCACGGGAGCAACCATGTCAGATGGTGAAGATGATCAGGCAGATAGCGAGGCAAACATGTATGATCCAAGCTTGGATGGAGCGGATAACATGGGTTTCGGCCTTCCCACAGAAAGCGAGCGATCCCTAATGGAGCGTGTCCGTCAAGAGCTAAAGCATGAACTAAAGCAGGGTTACAAAGAGAAGCTGATTGACATAAGAGAAGAAATTCTTCGCAAGCGAAGAGCGGGAAAGCTACCGGGAGACACGACTTCTACGTTAAAAGCTTGGTGGCAGTCTCATGCAAAGTGGCCATATCCAACAGAGGAAGACAAGGCACGGCTAGTCCAAGAAACAGGGCTACAGCTAAAGCAGATCAACAACTGGTTCATCAACCAAAGGAAAAGAAACTGGCACAGTAACCCATCTTCCTCCACCAGCGTCAAAACCAAACGCAAGAGGTACCAAATCAATCTTTGCACATCTGTCATATAG</cdnaseq>

Protein Sequence

<aaseq>MDKYYEEDWTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFGLPTESERSLMERVRQELKHELKQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTSVKTKRKRYQINLCTSVI</aaseq>

Gene Sequence

<dnaseqindica>1..27#1683..1803#2247..2434#2521..2652#3598..3768#ATGGACAAATATTATGAAGAGGACTGGGTATGGTTTCTTTTAGGACATTTTTCGTTTACTATATCTCCTTGTGCCAGTGCAGTGATAGCTGCAAATGCATGTTATTCTGTTGTCTTGGCAATCAGTCAAGGCATGGTCCAGTTCTCAGCGAGTTTCAAAATGTGAATTATAAATGAGCGTTGATTTCAGCAGCGCTGATAATAATAATGCGTAAAGCCCCAGCATTCATTTGATTTTGATATCGTTTTCCCTCTGTTGCGTCTACTCAGACGAATACAACGTAGTAGAGTTTGATTGAGTAGGCCGGAGTATATTATTGTAGGAATGGATACTATGGAACTTTTTTTTTGCATGTACTAAACACGTTTCCCATATTTTAAGGAGTGAAGAAGCAAATACGTTTTTTTTTCTTTTGAAACAGAAGAAGCAAATAATAGTACTAGAATGGCAAGACACTGAGAATGGCCAATGCACGTGACATTATATTATGTTTCTTGTGTCTAATGTGCCTTGCAATGTGAAAAAAGTAGTGGTTGATCTTGAATAAATGATGCATACCCATACAAGCATGGGCAGGACCGTCCTTACAGTACCTACTTGCACTAAAGGCTTGTGATATGGTGTACTTTTTGGTCCCTATGCAAGAAATGCGGGTACATGTCTTCTAGGACTTAAAATACTGTCTCATTTACCCCGTGTGGCCGATGTGTCTAAACTTAGAAGTGATTTGAATTATTGATTATTAGTTATCCCTTAACAGTAGAAAAGATATTCTACCACTGATAATTGAGGTGGTAGTATAACTAGACACAGTCCATTGGATTAGAAAAGATGGACAATCTACATTGATTTCTAGGACCATCGCAAAACATCTTCTGTAAGTATCTTGTATTTGCACACTTGAACAGGACCACCAGAACACAAATATGCCAACAGTGGTCCAAGATACTGGTTGTTTCATCTTCTTTTTGTCCACTTACAGTGCAGGCCTTTGATCGTATCAAGGGTCATACGACCAGAACTACGATGCAATATAGTCTCGGTCCCATCTATTTTTAAGCAACTAAGGATTCACCCTTTTTTTAATTTGCCTTGGATAGAAAACACAAGAAAGATATCATTATTGATTTGGTGGTCCTGGTCAGTTTCTTGATTCTTTGGTCATGTCCTGGCTGGTATGCTGGACCTTGTAATAATAGGTAGCAGCCATAAAGCATCATTATGCTTCAGATAGCTTCGCCTAAGCTAGCAACAGCACCAACGCACTACTGATGTTGGGACCATATATTTTTCCAATTTAGCCCTTCGTTTGCCTTACAGCTAATGAACTTGGTATGACACTGACAACCTCAATGTCACAACATGGATTTTTTCAGAGCAGAGGAATTGTACTTGTGTGCTCGGTCTGCCATACAGATTGTGTAATGCTATTAATGTTTGGTGTTTGATCTCCTTTTTTTTTTAATCAAAGATTGATCCTTCTGCACGTCCCTTTTCGGACGTCCTACGTACCATGTGACATCTTCTCTTTGCATCTCCTGCCTTTCATTGCCTTTGGGTATTGCATCTATTTTATGATATTGTTTTATATATATAGTGATTCTTTCAACATACTTGATCACTACATTTGTTTTAGAGTTTATCACTTCATGTTAGTAACCTGTAGTTGTTTCTTTTCTTAGACGCACTACGTCTTGCTATTATGTTCGTTTAAAGAGCAGCTACAGCAGCATGTCCGTGTTCATGCTATGGAAGCAGTAATGGCATGCTGGGAACTTGAACAAAACCTTCAGAGTTTGACAGGTACAACCTTTTTGTTATCTCTTTCAATTTTCATAATTTACAAAAGTAAAACTTTTATTAGGAAAAAAAATCCAAACTTTTCTTGGTAATGCAATGATAGTAAAGAATTGACTAATGGTTTGGAAATGGCATATTGTTGGAGCAGCGAATTGTTTGTTCCTTGCTCTTGCTTAGTCTGGCACGATATGCGCTGAACATTCAGTTCAAGATTTTTGCTTCAGATAGAAACTCCAAGTCCGGTTTAATCCATTTTCTAAAAAAGGAAAAAAAAAAGAAAGAAACTCCAAGTTTGTGAGCATTCTCTATTTCTAAAGCTTTGAGTGTTACAGACACGATCAGAGCGTAAATTGAGAGGGTTTTAGTATTTTGCTAAGTTAGTTTTTGGTAGACTGGTAGCAATCAAATTGATTAAAGAAAATGACAAACTGGAAATTCATGGACAGGTGCCTCGCCCGGTGAAGGCACGGGAGCAACCATGTCAGATGGTGAAGATGATCAGGCAGATAGCGAGGCAAACATGTATGATCCAAGCTTGGATGGAGCGGATAACATGGGTTTCGGCCTTCCCACAGAAAGCGAGCGATCCCTAATGGAGCGTGTCCGTCAAGAGCTAAAGCATGAACTAAAGCAGGTTTGAAATGGATTCCAATAATTGCTTTTCAGGGGGAAAAATGGACATGTTGATGAATCTCAGTACTAATCACTTGGCAAATTCAGGGTTACAAAGAGAAGCTGATTGACATAAGAGAAGAAATTCTTCGCAAGCGAAGAGCGGGAAAGCTACCGGGAGACACGACTTCTACGTTAAAAGCTTGGTGGCAGTCTCATGCAAAGTGGCCATATCCAACAGTAAGTGATGATGAGAGTGAGACAATTCACATGCTTAGCTTCCTTATGACTAATATTCTCCCTCCGTTTCACAATGTAAGACTTTCTAGCATTGACTATATTTGTTTAGATGTTAATGAATCTACACATATGTATGCGTCTAGATTCATTAACATTTATATGTATGTGGGCAATGCTAGAAAGTCTCACATTATAAAACGGAGGGAGTATTTGCATTCACAGGTTAGTCTAGAAGGAGTAAAATGCACCAACGGTCCTTAAACTTGTCGGGAGGTTTCACTTAGGTCCACGAACTTGCAAAGCGCACATCGAGGGCCCTAAACTTGATTTATTGTATCATTCCGGTCCAAAGCCATATTTGACCATGGTCTTGACTACGTGGCACGCCACGTGAATGATGACATAGATTTTTTTTTATTTTTTCTCCCTTCTTCCTTCTTTTTTTCACCACTGTGACAACCCCTCCCCTCGTGTCGCCTCTCACCACCGAGAAAAAAGAAGGAAGAAAGAGAAAAAAGAAGGAAGAAGGGAGAAAAAAATAATAAAAAAATTCCATGTCATTGTCCACGTGGCGTGCCACGTAGGCAAGACTACAGTCAAACGAGGCTTTGGACCGGTATGATACAATAAACCAAGTTTAGTGATCTCGATGTGCGCTTTATAAGTTCGTGCACCTAAGTGAAAACTCCTGACAAGTTTAAGGATCGTTGGTGTATTTTACTCGTCTAGAAGTCTATTATTTCCATGTGTCCTGCCTTCTCTGAATCTTGCGAGTTTTCTGAACTTGTTATGGTCTCCTATACTGTTCAAGCACCTTATTTTATTGTCACGCTTGTTGTGTTGCAATGCCGTTTGGCCACTTGTGCCCTCTCTTTTCATCCATTTTGGGTGTTCATCACAGGATGTACATAACTGAATTTCTCTCCCTTTTTTTTCGTCATGTAGGAGGAAGACAAGGCACGGCTAGTCCAAGAAACAGGGCTACAGCTAAAGCAGATCAACAACTGGTTCATCAACCAAAGGAAAAGAAACTGGCACAGTAACCCATCTTCCTCCACCAGCGTCAAAACCAAACGCAAGAGGTACCAAATCAATCTTTGCACATCTGTCATATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028399