BGIOSGA028411

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Revision as of 07:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028411| Description = Putative uncharacterized proteincDNA, clone:| Definition = Oryza sativa Indica Group BGIOSGA028411, complete gene.| t...")
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Gene Name

BGIOSGA028411

Description

Putative uncharacterized proteincDNA, clone:

Definition

Oryza sativa Indica Group BGIOSGA028411, complete gene.

LocusTag

K0048F05.8

Ensembl Transcript ID

BGIOSGA028411-TA

Ensembl Protein ID

BGIOSGA028411-PA

Length

5337

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:13577547..13582883

Sequence Coding Region

13577547..13577637,13577741..13577844,13578811..13579010,13579088..13579188,13579269..13579464
,13579669..13579830,13579941..13580022,13580825..13581088,13582131..13582258
,13582721..13582883

Genome Context

<gbrowseImage1> name=IndicaChromosome08:13577547..13582883 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:13577547..13582883 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATCAGCCAGATGGATTCTGGAAATGTTGTAGCTTTCTTCAGGGGCAGGAGCATCCTGATCACCGGTTCAACCGGGTTCCTTGGCAAAGTGCTTGTGGAGAAGATACTCAGGGTTCAGCCAGATGTCAAGAAGCTCTACCTCCTGGTCCGGGCAAACGACGTCGAATCCGCGACGCGCCGGGTTCAGGACGAGGTGACAGGGAAGGAGATCTTTCAAGTTCTGAAAGAAAAGCATGGTGATGGGTTCGAAAGTTTCGTGGAAGAAAAGGTCTGTACTTTGGCAGGGGACATAATCTATGAGAACTTGGGACTAGATTCTGCCAAATTGACAGAATTGTCGAACGAAATCGACATCATCGTCAATGGTGCTGCGACTACAAATTTTTATGAAAGATATGATGTGGCTTTTGACTCGAATGTCTTGGGAGCTAAGAACATCTGTGAATTTGCGAAGAAGTGTACAAAACTGAAGATGCTGCTTCATGTTTCGACTGCCTATGTCGCTGGAGAACAAGAGGGACTGATACTAGAGAAACCATTCTTGATGGGTCAAGCACTAAGGGAAGGCAGGCATTTGGATATCACATCCGAGCTAAACCTGATCAAGGAGACCAGGAGAGAGATGAAAGCTAGTAACCGTTGTTCAGAGAAGACTGAGAAGAGAACAATGAAGGAGCTTGGGCTCAAGAGGGCTAAGCATTTTGGATGGCCAAACACCTACGTTTTCACCAAGGCAATGGGGGAGATGCTGCTGGGGCACCTCCGCGGGGACCTTCCGGTGGTGATCATCCGGCCGAGCATCATAACCAGCATCCTCAAGGAGCCATTGCCCGGATGGATGGAAGGAATCAGGACGATCGACTCGGTGATCATAGGTTACGCCAAGCAGACCCTGTCCTTCTTCCTCGTCGACCTCAACCTCATAATGGACGTGATACCGGGGGACATGGTGGTGAACGCGATGATGGTGGCAATGGCGGCGCACTCCGGGGAACAGGCGCAGACCATCTACCACGTGACGTCGTCGCTGCGCAACCCGGCGCCGTACGCGGTGCTGTCGGACGCCGGCCACCGCTACTTCTTCGCCAACCCGCCGCCGCGCGCGGGGAAGAACGGGCGGCTGCGCAGGATGCGCTTCTTCAGCACGGTGGCCAGCTTCCGCGCCCACATGGCCATCAACTACAAGCTTCCCCTCGAGATCCTTCGGCTGGTGAACATTGCGCTCTGTGGCATGTTCTCCCGGCGCTACGACGAGCTGAGCAGGAAGTACAAGTTCGTCATGCATCTCGTCGAGCTCTACGCGCCCTACACCTTGTTCAAAGGCTGCTTCGACGACATCAACACGGAGAAGCTAAGGATTACGATGAGGAAGCAGGAGGACAAAAACGATGGAGGATATTGTTTTGATTTTGACCCCAAGTCGATTGATTGGGATGAGTATTTCTACAAGGTTCACATCCCCGGTGTAGTCAAGTATCTGTGTGATTGA</cdnaseq>

Protein Sequence

<aaseq>MISQMDSGNVVAFFRGRSILITGSTGFLGKVLVEKILRVQPDVKKLYLLVRANDVESATRRVQDEVTGKEIFQVLKEKHGDGFESFVEEKVCTLAGDIIYENLGLDSAKLTELSNEIDIIVNGAATTNFYERYDVAFDSNVLGAKNICEFAKKCTKLKMLLHVSTAYVAGEQEGLILEKPFLMGQALREGRHLDITSELNLIKETRREMKASNRCSEKTEKRTMKELGLKRAKHFGWPNTYVFTKAMGEMLLGHLRGDLPVVIIRPSIITSILKEPLPGWMEGIRTIDSVIIGYAKQTLSFFLVDLNLIMDVIPGDMVVNAMMVAMAAHSGEQAQTIYHVTSSLRNPAPYAVLSDAGHRYFFANPPPRAGKNGRLRRMRFFSTVASFRAHMAINYKLPLEILRLVNIALCGMFSRRYDELSRKYKFVMHLVELYAPYTLFKGCFDDINTEKLRITMRKQEDKNDGGYCFDFDPKSIDWDEYFYKVHIPGVVKYLCD</aaseq>

Gene Sequence

<dnaseqindica>1..91#195..298#1265..1464#1542..1642#1723..1918#2123..2284#2395..2476#3279..3542#4585..4712#5175..5337#ATGATCAGCCAGATGGATTCTGGAAATGTTGTAGCTTTCTTCAGGGGCAGGAGCATCCTGATCACCGGTTCAACCGGGTTCCTTGGCAAAGGTGATTGATTGTTGATCAGTGAATTCTGTACCCCTGCAGACAGTGCAGCTTGTTTGATTGGTGTTTAACTGTTCGGTGTTTTGGTTCTGTGCTCATTGTGCAGTGCTTGTGGAGAAGATACTCAGGGTTCAGCCAGATGTCAAGAAGCTCTACCTCCTGGTCCGGGCAAACGACGTCGAATCCGCGACGCGCCGGGTTCAGGACGAGGTGGGGTAGTTCTTCTGGCTGTTTTTTCGCCACCCCTGTTGTAGCTTGTAGGTTTTTGTACAGTCTGAAATGGCTGACTAACCATCACAATGTGTTTCCATGCATGGGCGCCAAATGTTGACATATTGAAAGAAAGCTCACAAAAACATCTATGATTTTCTTCACAAGTTAGACTGCAGTCCTTAGAGCATATCTAATTGTTACCGAGTATCTAGTTCAAATATTACATGACGTCTGAAACCACCATGGCATAAACAGGAGAAAAAGGTGGCTGTAAAAGTTATTTTTTAGTATCAAACAACAAAGGGCTTTTGCTAAAATTTGTTCAATATGATAGAGCATTTGTTTGGTAGCTACATCTAGAAATCCATTTACTCTCATCACGCATTCATCAAAACTACCTCTACAATTTTTGTCAGACCAGTTACTGACCAAATGAAGTAATTATGTTTATAGAGAAGTATACATAATTTGCAAAGTGACAAGAAGTTTACTCCAGGACTGTCCATTGAGCAATTCTGCCTTGGAAACTACAGGGCAGCAGGGGTACTTCAAATAGATAAAGACATTGACATGTCGGAAGCAATGGGAAATTACCAAAAATGCTTACCGGAAATAATACACACTTGCACAGTGGACAGTAGTGGAACACAAACTAGAGACGGTAAATAGTAGTTGAGGTGTACCCAAATAGTAGTTGAGATGCATCCAATGCTATTGTCAAGTCGAAAGAAATAAATGAATGGAAACTTGCACTGTGCCAGATCTGGAGGTTCTCTCAATCCTGGTGGTCCTATTGGACTAGTAGCATTCGTTCTGAGAAATACATTCTCCCAAGTCCCAAGAAAGTATTCATAATAGATGTATTAAACTGATCATACATAGAACAGTTTGTAACGCTCTGACAAAAGCTATTATATTCTTTTATGGTGTTCTTTCCCTCCAAATGCTATTTGATTTCTTCAGGTGACAGGGAAGGAGATCTTTCAAGTTCTGAAAGAAAAGCATGGTGATGGGTTCGAAAGTTTCGTGGAAGAAAAGGTCTGTACTTTGGCAGGGGACATAATCTATGAGAACTTGGGACTAGATTCTGCCAAATTGACAGAATTGTCGAACGAAATCGACATCATCGTCAATGGTGCTGCGACTACAAATTTTTATGAAAGGTTTGGGAACTTTTCTGGTCAGAGATTAATAGTGTAAATTGGTCAACATGATTTATCAGCGTCTGACGATTTTGCAGATATGATGTGGCTTTTGACTCGAATGTCTTGGGAGCTAAGAACATCTGTGAATTTGCGAAGAAGTGTACAAAACTGAAGATGCTGCTTCATGTTTCGACTGGTAGTAAAAAACAGCACTTGCTTAATATATTTGGCATATGTGCTTCATTGTGAATTCTGATGATATAATTACTTGAACAGCCTATGTCGCTGGAGAACAAGAGGGACTGATACTAGAGAAACCATTCTTGATGGGTCAAGCACTAAGGGAAGGCAGGCATTTGGATATCACATCCGAGCTAAACCTGATCAAGGAGACCAGGAGAGAGATGAAAGCTAGTAACCGTTGTTCAGAGAAGACTGAGAAGAGAACAATGAAGGAGCTTGGGCTCAAGAGGTCAGCCACAAATCAATCTTGAGCCAATCAATCAAACAAAATATTAGTTCACCTAAGAAGCTCCTTAATCTTTTCTAAATCCCTTAATTTTTTCTTTACAGTAAAGTATAATTTATTAGAAAAAGTTAACGGCTAAACCTCAGCGTATCTTCAAAACTGACAAAGTTACTGCATTTTTTTACTTGGATGCACAACTGAATGAAGGGCTAAGCATTTTGGATGGCCAAACACCTACGTTTTCACCAAGGCAATGGGGGAGATGCTGCTGGGGCACCTCCGCGGGGACCTTCCGGTGGTGATCATCCGGCCGAGCATCATAACCAGCATCCTCAAGGAGCCATTGCCCGGATGGATGGAAGGAATCAGGTGAGTGAGACGCATATACAAAAACTAAATCAACTAGTACTTGTCGCTAGCTCTTTCTTGGCCAGCTGATCGAATGGATCACTGAACATTTTCGCCTCGATCTTTTGCAGGACGATCGACTCGGTGATCATAGGTTACGCCAAGCAGACCCTGTCCTTCTTCCTCGTCGACCTCAACCTCATAATGGACGTGGTGAGTAAGGCCTTGTTGTTCTTTTGGGCTTTCTTCTAAAAAATTACTCCTACATGTTATGGAAATTACCTCATAATGGAAATTATTTGTTACTCCCTCCATATTTTAATATATGACGCCATTGACTTTTTATCCAATATTTGACCATTCGTCTTATTCAAAAAATTTATGTAACTATCATTTATTTTATTGTGACTTGATTTATCATTAAATATTCTTTAAGCATGACATAAATATTCTCATATTTGCACAAAAAATTTGAATAAAATGAATGATCAAACGTTGGTCAAAAAGTCAACGACGTCATACATTAAAATACGGAGGGAGTATCTAGAAATAAATAAATTAAGGCCTTGATTGGTTGGTATGGGATTAGAGGAGATTAAGTGAGAATATAATTACACGTCACAGTAGACATGGAATAAATCCGACCTATCCCTTTCTCACAAGGATTAACCAAACAGGTTCATAGAGAGGTTCTATATCTAGGAAATCATAAAATTTTGGGGTACTGATATTAGCGAAATCTTGGAATTTTGGATATTTAGGGCAAAAATGGTTAAAAAATTGAACAGATTTTGGTTAAATTTAAATGAATTTTACTTAATCCAAAAAAAATGTATTTTTTGACTCAAATAACTTCCTGTCGCTGGATCGAAATACCCGAAATTAACGAAATTGCAAACCAAAATATTAAGCCCTTTAGTGACAACCAACATTAATTAATTGAACAGTCTGAAATGATTAACCTCCATCGAGGTTAGCAATGGCGCTGTATACTGACTGTGCCTGGGACATGCAGATACCGGGGGACATGGTGGTGAACGCGATGATGGTGGCAATGGCGGCGCACTCCGGGGAACAGGCGCAGACCATCTACCACGTGACGTCGTCGCTGCGCAACCCGGCGCCGTACGCGGTGCTGTCGGACGCCGGCCACCGCTACTTCTTCGCCAACCCGCCGCCGCGCGCGGGGAAGAACGGGCGGCTGCGCAGGATGCGCTTCTTCAGCACGGTGGCCAGCTTCCGCGCCCACATGGCCATCAACTACAAGCTTCCCCTCGAGGTCAGTTTGCTTTTTGTTGATTTAATTTCTTGCTTTGAATGGTTTGATAGAAACCATATATAACTTCTCTGTCGTAGGACTCGTGCATCTATCTACACACACCAGATGTAACTGGAGATTTCGTTAATTAACACTAAAAAAATGCTTTATCTAGTAAAATGCTCCAAATAAATATGTTTCCCATTACTCCCTCCAGGCTAATAATACTTATCGTTTTATATAAAGATGAGGTTAAACTTTATAATCTTTGATTATAAATTATTTTTAAAATATTTGTCTTTCAAATATAATGACTACATGTATAGGTTAGTCTTAAAAAAAGTACTTTAATAAAATCATATATTTATTAACACTTATATATATATTATAATGGAAAATAATGGTCAAAATTGTTTTTTTAAGACCGTGCCCTTGTCAAAAACGACAAGTATTATTAACCCGAAGGGAGTAATTCATTGTTTTATTCAGAAAAATGCAAATCTCAGTGAAGATTATCGGTTATTATTAGTCCGAGGGTATCTATATATCTGAGCAATGCAAGTAAATAATTCAGCTGACGGATATTCTTTGATTCGAATTTATTTATACAAATTGCTATTTAACAGATTTTAGTCGTCGCTGAAAAAAATTCTTTTTCTTTTCAATTATTTAAAGTGGAAGTGTTATGCAATATAATATAATGTGTAGCTACTTCTGTTCATTTTCACTACAATCTTGTTAATATATGTAGTTTTAATTTAATTTTATCGAAGTTTGGATATTCTTATGTAAGTAGAGCTAAATTAATGATCAGCCTAATGAAAGGGATGAAGTTTACATTGTGAATGACGGATGTTATTGTAAGAGAGTTACATTTTTATCCGAGAGATGATGAAAATAACTGAAATTTTCTCCTGAAAACTAGACAGCCCCTACAAATAAATCAACCAGTTTGCCCCTGCTTAATTTTTAGCCATTTTTTTCCTGAAATTTTATTACAGAGGATTACCAAATTAAGCAAGTGGCATACACCGATTCATTTGTGAAATGTGATGGTGTGCAGATCCTTCGGCTGGTGAACATTGCGCTCTGTGGCATGTTCTCCCGGCGCTACGACGAGCTGAGCAGGAAGTACAAGTTCGTCATGCATCTCGTCGAGCTCTACGCGCCCTACACCTTGTTCAAAGGCTGGTAAGCACCCAAGCACACACTCGCTCTTCCTAAGCAAGCTAGCATGTATGTCAAATTGCTACTCCCTCTATTTTAATTAGTACATTAAACATGATTTATATCTTGCATACTTGCGTAAAATTTTTAAATAAGATGAACGATCAAAATGTGTGTCCAAAAATTATGGCCATCATCTCTTTAAAAAATGGAGGCAGTATATGGTAACATTGAACCTTTTCATCAAACTCTGTTCAACTATATTTATTCTATTAGTTAGTTATAAGTAATAAGTGAAAAGTGTATACTGGCTGTCTTCAGAAGGACCTTGGGTGTGACTAGTATGTTTGATTATTTGTACAAATATTTCTAGAAAGTTGAACACTCAAATAAATTTAAAAGTTAATGGCGTGATATATTTAAGACCGGAGTACTAGTTAACGGCCAATAATTTGCTCCCTCATAATATATTATGGCAATATGTAGCTTCGACGACATCAACACGGAGAAGCTAAGGATTACGATGAGGAAGCAGGAGGACAAAAACGATGGAGGATATTGTTTTGATTTTGACCCCAAGTCGATTGATTGGGATGAGTATTTCTACAAGGTTCACATCCCCGGTGTAGTCAAGTATCTGTGTGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028411

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028411&oldid=34668"