Os11g0157400

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0157400| Description = Exo70 exocyst complex subunit family protein| Version = NM_001072333.1 GI:115484278 GeneID:4349830| Length = 5185 bp...")
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Gene Name

Os11g0157400

Description

Exo70 exocyst complex subunit family protein

Version

NM_001072333.1 GI:115484278 GeneID:4349830

Length

5185 bp

Definition

Oryza sativa Japonica Group Os11g0157400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2742977..2748161

Sequence Coding Region

2743357..2743474,2743853..2743999,2744084..2744175,2744810..2744909,2744992..2745192
,2745656..2745861,2746021..2746233,2746309..2746447,2746574..2746813
,2746916..2747121,2747483..2747578,2747750..2747923

Expression

GEO Profiles:Os11g0157400

Genome Context

<gbrowseImage1> name=NC_008404:2742977..2748161 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2742977..2748161 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtggcggcggcggcgaggccgcagacggcggaggcgctgtcgaagcgggcgagcatgctgcgggactcgctgcagaggagccaggggaacacggacgggatggtcaccatcctcggatccttcgaccaccgcctctccgcgctcgaggccgccatgcgccccacccaggtgaggacgcacgcgatccggatggcgcacgagaacatcgacaagacgatcaaggccgccgatggcatcctctcccagttcgaccttgcgcgccgggctgaggcagcggtattgaagggtcctcatgaggatttagagagctacctggaggcagtggatctgctcaaaggcatcgttcgcttcttttccacaaacaagaacttcaagagcagtgaaggagttctgaatcatgtcaacaacctgttggctaagtctgctctgaaaattgaagaggaatttaggcagctgatgactacgtacagcaaacctattgagcctgatcgtctctttgattgtcttcccaagtctctgcggccaacaaaagatgatcctgacgctgatccagggaatgctggccactctgagcatccatccaaaagcttggagactgcagtataccggacaccaacactaattcctccaagaatcctgcctctcatgaatgacatcgctcagcagctcattcaggctggaaatcagcagtcatgctataaaatttacagagatacccgtggatctgcactagaatcgagccttcggaaattaggagtagagaagcttagtaaagaggatgtacagaagatgcagtgggaagctttggaggctaaaattggaaactggatccattttatgcgaattgcggtcaaactactactagcaggtgaaagaaaaatctgtgaccagatttttgatggtgtcaactttaacaaggatcaatgttttgctgaactgacagcaaatagtgtcgtgactcttctaagctttggagatgccgttgctaaaagcaaaaggtctcctgaaaagttgtttgtattgctagacatgtacgaagtaatgcatgaacttcaacccgagattgaggtgattttcgaaggaaaatcatgctctgagatgcgggaggcttcattgggcttggctaagcgcttggctcagactgctcaagaaacctttgctgattttgaggaggctgttgaaaaggatgcttcgaagactattgttaatgatggaactgtgcatcctttgactagctatgtgattaattatgttaaattcttatttgattaccaatcgacactgaagctactatttcaggaatttgaaactggtagtgagacagaatctcaacttgctgttgttaccatgaggataatgcaagccctacaaaataacttggatggaaaatctaaacagtacagggatcctgcattgacctacttatttctgatgaataacattcattatatggtcagatctgttcgtagatcagaagcaaaggatatacttggtgatgactggattcagaggcaccgtagaattgtgcagcaaaatgccaatcagtataaacgtgttgcttgggcaaagattctccagactctttccatacaaggtgcgggcagcactggttcatcagatcttagcagcagtggggtttcaagagctatgatcaaagaacggtttaaatctttcaacatgcaattcgaagagctccatgcaaagcaatctcagtggattgtacctgatcaggaattgcgtgaatccttgaggcttgcggtagctgaggttctgttaccagcctatcggtcgtttgtcaaacgtttcggtaaccttgttgagaatggcaagaacccgcacaaatacgtgaggtacagcccagagatggtggagcagctgttgggggaattcttcgaaggacagcaatggggggagcagaagcgctga</cdnaseq>

Protein Sequence

<aaseq>MVVAAAARPQTAEALSKRASMLRDSLQRSQGNTDGMVTILGSFD HRLSALEAAMRPTQVRTHAIRMAHENIDKTIKAADGILSQFDLARRAEAAVLKGPHED LESYLEAVDLLKGIVRFFSTNKNFKSSEGVLNHVNNLLAKSALKIEEEFRQLMTTYSK PIEPDRLFDCLPKSLRPTKDDPDADPGNAGHSEHPSKSLETAVYRTPTLIPPRILPLM NDIAQQLIQAGNQQSCYKIYRDTRGSALESSLRKLGVEKLSKEDVQKMQWEALEAKIG NWIHFMRIAVKLLLAGERKICDQIFDGVNFNKDQCFAELTANSVVTLLSFGDAVAKSK RSPEKLFVLLDMYEVMHELQPEIEVIFEGKSCSEMREASLGLAKRLAQTAQETFADFE EAVEKDASKTIVNDGTVHPLTSYVINYVKFLFDYQSTLKLLFQEFETGSETESQLAVV TMRIMQALQNNLDGKSKQYRDPALTYLFLMNNIHYMVRSVRRSEAKDILGDDWIQRHR RIVQQNANQYKRVAWAKILQTLSIQGAGSTGSSDLSSSGVSRAMIKERFKSFNMQFEE LHAKQSQWIVPDQELRESLRLAVAEVLLPAYRSFVKRFGNLVENGKNPHKYVRYSPEM VEQLLGEFFEGQQWGEQKR</aaseq>

Gene Sequence

<dnaseqindica>4688..4805#4163..4309#3987..4078#3253..3352#2970..3170#2301..2506#1929..2141#1715..1853#1349..1588#1041..1246#584..679#239..412#cctcttccccctctccctccttcctcaaccacgtcgccgacgaccaccaccacccaccaaatcacgcatctccccactccattgccaccgcctcacgcttctacccctctagaaccttccagaacaatccagtatcccctctcctcgcctcctcgagatcgcgcggagagggaggcggcgtcgtcgcttgatctgtcaggaggaggaggaggaggagggtagtgtgaaatcgggggatatggtggtggcggcggcggcgaggccgcagacggcggaggcgctgtcgaagcgggcgagcatgctgcgggactcgctgcagaggagccaggggaacacggacgggatggtcaccatcctcggatccttcgaccaccgcctctccgcgctcgaggccgccatgcgccccacccaggtaggtagcatccgcaccccaaccccgcccctctcctccacatttgaaccatttccgttgtttcattcggcgaaatttgtagcagcgccggcacggaattcgtatgaactgaactcgtgtgtgtgtgtgtgtgtgtgtgtgtggggtcatgttttggtggggggtttgcaggtgaggacgcacgcgatccggatggcgcacgagaacatcgacaagacgatcaaggccgccgatggcatcctctcccagttcgaccttgcgcgccgggtacttcttccacactgaaattttcctacattttttgatgaatttgacagtcaattttatatgtttgggattggatgaggttgtggatcatgacattgtatagatctggagggattaagtatggtgggaaaatggcacaactgttgcattccattttcaccatgttcagaagttctgaacatttctgaataaattactattagatgatcttaaaagatctaaactggtagctaattgaaattcctttacaagatagtagtttcgtaggtacctgaaaattggctttgaggttgtaatacttcaagtccagactctgcattggatttgtgactttgcgcaaatgtttgctttcgatcttcaggctgaggcagcggtattgaagggtcctcatgaggatttagagagctacctggaggcagtggatctgctcaaaggcatcgttcgcttcttttccacaaacaagaacttcaagagcagtgaaggagttctgaatcatgtcaacaacctgttggctaagtctgctctgaaaattgaagaggaatttaggcagctgatgactacgtacaggtaagagtctctattatcattccacatccatgatcgactcctgagctattgctagtatgccagcaaaagaatagttaattttatgttgttctctacttgcagcaaacctattgagcctgatcgtctctttgattgtcttcccaagtctctgcggccaacaaaagatgatcctgacgctgatccagggaatgctggccactctgagcatccatccaaaagcttggagactgcagtataccggacaccaacactaattcctccaagaatcctgcctctcatgaatgacatcgctcagcagctcattcaggctggaaatcagcagtcatgctataaaatttacaggtgggtttggattatgattttttacatctagtctgtgttcctgttagtttcactccacaactatcctgagttcttttaacactacagttgtgcaaacatcaagctagtttgttcatcttttttcagagatacccgtggatctgcactagaatcgagccttcggaaattaggagtagagaagcttagtaaagaggatgtacagaagatgcagtgggaagctttggaggctaaaattggaaactggatccattttatgcgaattgcggtggggattcttctgagaataggtccatattgtgtatattcagaccttaagactcatattttgcttacgacacaggtcaaactactactagcaggtgaaagaaaaatctgtgaccagatttttgatggtgtcaactttaacaaggatcaatgttttgctgaactgacagcaaatagtgtcgtgactcttctaagctttggagatgccgttgctaaaagcaaaaggtctcctgaaaagttgtttgtattgctagacatgtacgaagtaatgcatgaacttcaacccgaggtattctggaagttatttgttgagacctgactcctgcatgatttactcattctttcacttccacaattagcttgtgagacttttcatgtcgttatggttttctcttcactatgaagactacaaaatttcaaccctatgcttgtttgaacttgttaccagattgaggtgattttcgaaggaaaatcatgctctgagatgcgggaggcttcattgggcttggctaagcgcttggctcagactgctcaagaaacctttgctgattttgaggaggctgttgaaaaggatgcttcgaagactattgttaatgatggaactgtgcatcctttgactagctatgtgattaattatgttaaattcttatttgagtaagtactcacttttaacttagtattcaaattcatggacatgtagattcgtaaatcactacaatttgagtgaggtatggtacaatgatcgcgatgagtatctatgtgtctatatgttcatagttctatccgtcaagaattactctgagcttcacatctactgaggagagtgcagataacaattagggaggaaatagaaagaacttcaatcaccaaaattactgcagtgaaaaatttactaatagttatacataaatttaggtggacagaaacttttattttcccccctattttgtttctgttctgaactaattcctaacggttcaaagcaaacttctgatctactattccatacatacatattctctattacattactattgttcatcaagaatggtctaatttgtttatagttttcctgtattcttatcacaaacctaacaacatttccttgtatgaacagttaccaatcgacactgaagctactatttcaggaatttgaaactggtagtgagacagaatctcaacttgctgttgttaccatgaggataatgcaagccctacaaaataacttggatggaaaatctaaacagtacagggatcctgcattgacctacttatttctgatgaataacattcattatatggtcagatctgttcgtaggtatgtttgcctcctctctttgaatctgcatcctataaatactggcaatatgctcatttaatgttgttctgtgtttcctcagatcagaagcaaaggatatacttggtgatgactggattcagaggcaccgtagaattgtgcagcaaaatgccaatcagtataaacgtgttgcttgggcaaaggtaagtggatcgacaaattatttagtgttctgcacaccagtttcctgctgatatatcgatgcgcaaggcttttgcgcgttcaccaaaaaaaaaagtgcacaccagtttccttttttgtttggctgcatggtgtttacctatgtggacctctttgttaattttattttagaaaacagcatgctagtttgtgtgacaatccaaagcacttgtaagacttttgtccacattcctccatttctgtgccagccggttcaaatttgagttggttatgccccaatacgaatctttttacaaagctgagcttcaaaagtggcaactttagttattatggtgttactatcagattaaaaattaaagcacctgcaaattccttgtgtacatgtagttttacagaactaacgtatacagatgccatgttaactcaatgcaattttgtaaactaatgtatgtggcaacgctgaatcgcagagataataattttactgtgatagctttatttcctacaaaggctttctttttatgaaatcaagccttgtggatttggtagttaacgtgcttgttacatgattctgcatattgaataacagttggttataaactatagctgccatgcttgatgcttctgttatttcagattctccagactctttccatacaaggtgcgggcagcactggttcatcagatcttagcagcagtggggtttcaagagctatgatcaaagaacggttggtaccttggccgcttgttttacactgctcggatataaataataactggagtcacaaaacattatgattttgccttggcaggtttaaatctttcaacatgcaattcgaagagctccatgcaaagcaatctcagtggattgtacctgatcaggaattgcgtgaatccttgaggcttgcggtagctgaggttctgttaccagcctatcggtcgtttgtcaaacgtttcgggtgcgttaacagtcacttttcatcttctccttacaaccataacttttttgacatctgcgctaaacttaaactctgcccagtgtcatccatgcaatcgatttatttggcttcgtctgaagtttttttgagagttcgatgtagtatcctaaactgtaatcctatttgtcaatccccctacaagaaaatctctcatttgtctatactgttaaatgattcactgtcaattcggtcccttgtcaaaccacaaaggtaactgcatagtgcacgcacgatggaatagtggcgtgagcatgacagtggctacttctgcaacgttttatgtttcctcccttctgttccaagataatgacagtaccatatacacatttgacgttgcagtaaccttgttgagaatggcaagaacccgcacaaatacgtgaggtacagcccagagatggtggagcagctgttgggggaattcttcgaaggacagcaatggggggagcagaagcgctgagcagtgaacactgtccatgagcgacagcacgagctctaccagtaagttgaagttgtacatcagcacgacttgcaaagatttctttcccggacaagcaactaacgattctttgcgttataacgtattgtcataccgatgcgctaccgatgtatatatatataatagtaacttcagtttgcctcagtgctgaatgccaaacacggcaacaggtgaagaggcgtgtatctctctctgttctcacaacacaccgatgttattattgttttgtttttttcccgatcacagagttgtactcttctgtagaaaatattgcttattgcagtgagactgtactattgggatcgaaaggcataataaaggggacaagacaatgttatgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0157400, RefSeq:Os11g0157400