BGIOSGA028426

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Revision as of 07:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028426| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028426, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA028426

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028426, complete gene.

LocusTag

OSJNBA0058D03.115

Ensembl Transcript ID

BGIOSGA028426-TA

Ensembl Protein ID

BGIOSGA028426-PA

Length

7675

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14045978..14053652

Sequence Coding Region

14045978..14046206,14047290..14047341,14049062..14049119,14049895..14049963,14050055..14050180
,14050497..14050547,14052052..14052129,14052903..14053005,14053084..14053118
,14053206..14053652

Genome Context

<gbrowseImage1> name=IndicaChromosome08:14045978..14053652 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:14045978..14053652 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGAGCTGCCGGAGGTGGAGGTGGCGCGACGGGCGCTGGAGGAGCACTGCGTCGGGAAGAGGATCGTGCGGTGCTCGGCTGCAGATGACACCAAGGTCATCGACGGCGTCGCCCCGCCGCGGCTGGAGGCAGCGCTTGTCGGGAGGACCATCTCCGCTGCTCGCCGCAAGGGCAAGAATCTGTGGCTTGCGCTTGATTCTCCGCCCTTCCCTTCCTTCCAGTTCGGAATGGCTGGAGCTATTTACATCAAGGGTGTGGAACTGAGCAAATACAAAAGGTCTGCAGTGAGCCCGACTGAGGAATGGCCTTTGAAGTATTCCAAGCTGCTTGTTGTAATGGATGATGGTTTGGAGTTTTCCTTCACTGATAAGAGGCGTTTTGCAAAAATTCGCTTTCTTGACAATCCAGAAGCTGTCCCACCAATTTCTGAGCTTGGACCAGATGCCTTATTTGAACCTCTTCATCTTGATGATTTTGTAGAGTCACTAAGTAGGAAAAAAGCTCCAATAAAAGCCCTTTTGCTTGATCAGAGCTTTATATCAGGAATTGGCAATTGGATTGCAGATGAAGTGCTTTATCAGGCAAGGATTCATCCAATGCAAACAGCATCGATGATTTCTAAGGAGAAATGCAAGGCACTCCATCAGTGCATTATAGAGGTGATTGAAAAGTCCTTAGAAGTTGGTTGCAACAGCAGTCAGTATCCAGAAAACTGGATATTTCACTCCAGGGAGAAGAAACCCGGCAAGGCCTTTGTGGAGGGGAAGAAAATTGACTTCATTACAGTTGGTGGCAGGACTTCAGCATATGTGCCAGAGTTGCAGAAGCTGGACGGGATTGATGCAACAGCAAGCAGAGCGAAAATAAGCAAAGAACAGAGCAAATCAAATAAAGCTGCTCGTGAAGTGGACGATGATGAGGAAGAGGCTAAACCTGCCAAGAGGGGAAGGAAGCAATTAGTGAAGGCAACCCATGAGATCCAAGAGGATGAGGAAGATACAAAAGCATCAAAGAGAGGAAGGAAGCAACCAGCAAAGACATCGAAGGGCTCGTGGAAGAAAGCTCATCATTCTTCTGAGGGTAGTGGTGACGACGACAGTGATGATGAAGCAGTTGATAAGGTGGTCGCGGAACAAGGGAAGAGGAGGGATCCAAAGCAACCAGCAGAGGCGAAAAGCTCGTCAGACAAAGGAGGAAGTGCTGCCCCAGCAAAGAGGCCACAGAGGAAGAAGCGGCAATTATAG</cdnaseq>

Protein Sequence

<aaseq>MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGKNLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEFSFTDKRRFAKIRFLDNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQSFISGIGNWIADEVLYQARIHPMQTASMISKEKCKALHQCIIEVIEKSLEVGCNSSQYPENWIFHSREKKPGKAFVEGKKIDFITVGGRTSAYVPELQKLDGIDATASRAKISKEQSKSNKAAREVDDDEEEAKPAKRGRKQLVKATHEIQEDEEDTKASKRGRKQPAKTSKGSWKKAHHSSEGSGDDDSDDEAVDKVVAEQGKRRDPKQPAEAKSSSDKGGSAAPAKRPQRKKRQL</aaseq>

Gene Sequence

<dnaseqindica>1..229#1313..1364#3085..3142#3918..3986#4078..4203#4520..4570#6075..6152#6926..7028#7107..7141#7229..7675#ATGCCGGAGCTGCCGGAGGTGGAGGTGGCGCGACGGGCGCTGGAGGAGCACTGCGTCGGGAAGAGGATCGTGCGGTGCTCGGCTGCAGATGACACCAAGGTCATCGACGGCGTCGCCCCGCCGCGGCTGGAGGCAGCGCTTGTCGGGAGGACCATCTCCGCTGCTCGCCGCAAGGGCAAGAATCTGTGGCTTGCGCTTGATTCTCCGCCCTTCCCTTCCTTCCAGTTCGGTCCGTGGATCTCCACACCCTCTCTATAGTCACATTTCCCTTCCTTTCCGCAATGGACCATTTATTGCTTTTCTTTTTATTACTATTATTTTTTAAGATAGAACCGTTCTTCAGGAGGTTTAGGGTTTTTCTTGAGTTGTTTTTTATTTGTGACATTTTGGAATCTTGTGTCATGCTGTTCTTGTGGATTTTTCATGTTTCGTTGACGCTGCTCTTAGCGAGTCCCTTATTTTAGTTCTGGTAGTAGTGTAAATATATATCTGTAGGTTTTCTTTTGTACAGAATGCCTATAAGGTAATTAATTACTATTAAACTAAATGCGCAACTCTTGGAGTGCTAAATGGAGTGCCTAAGCACAATGGTTGTTTTGGTAATCCGGCATTATCATAGGCACCTCATTTTTTTTGTGTTATGTCAACTTTCTTGGAGCATTTGATCACAACATATTTGTCAATCAACAACTACACTTCTAGTCTTTCTCCACGTGCTACAGCTATCTGGATCTTAGTATTCGTGTCTTACCTAAAGAAACGGAAACACAAAATTAAGTACGCAATAGCTAAAAAACAATAAAAAAGAAATGAAGGTGAACAAATACTGAAGGAGAGGTGTGACTAGCTAAAGTTCAGGTTAAGGAACTCCGGTGAGTAAAATTTGTACTGGAACCTTCAGTGCAGTTTTTGACTAGTGAAAATTCCACCAAAATCTTGATTACAGTTTCTCTTTGCCCCTTTTCTTTGTAAATACATTTTCTTCCTTATTAATGAAATGAAACGCAGCTCAACTGCGTTTTCGAGAGAAAAAAAAATCTTGATTTTACAGTTTTTGCCGAGTTACAATTCAGTCTTTCCGCCATGTGTGATTCTGACTCAGCAAAAGTGCAATGGCACTAACTCAGTGTGCCAGCATTGACATTAAAATGGGCCAAATTTGATGTTTAGAGGGCTGCTTTTGGACATTTTAATAGTTGAAGGACCAATTTGAGGCCACTGTCAATTTCAGGGGTCATTTAGTGCATTAACCCTTTTAAGTTCTAAGTATACAAAGTTACAAACAGTACCTAATTGTTAGTTTCTGTTACAGGAATGGCTGGAGCTATTTACATCAAGGGTGTGGAACTGAGCAAATACAAAAGGTCAGTGGCACATAATTTATTAAACAAGACAATGAAATGGCTTATCAATCATACAATATTAAGTATTAGCTTTATATTTAACTATTTAGGACTATTCTGCATGCTTTTCTTCATTAGCAGATACAATCAATTTGTACTGAAACATTTGCAGCCGCCTAATGTTCTTGATGCCTGTTGGTGATTCTGCAAAAGAAAATTTTCATCTATTGGTGTATTCCATGAAATCGTGGAACCTTAGGAAGCCCTATATTTGGCGAATAGATGATTTTACTCCACTTTCAGGAAAGTGTTATGATTCCAATTGACATAACTGGAGAGACACAATCAAATACATAGTTTGGTTACACTGTTAATTACACCCTGTGCTGATTCTATTCTGTTATGGTTTTTGTCGTAATTTTTTTAGAAATGTCAGAAAAATCTGTGAAAAGCTATGACGACAAATAGTTTAAGTAGATAGATGGTCAACGTTTTCATATACTTTTTTCTATTTTTCATTGATACTAGAGAAAACATAATGTGAATATGCCTTCCTTGGGTTGTATGGGTGGATGTTATTTCGTGATAAGAGTTATTTGGGATATTATTAAAGCAATATGCTTGCATAAACCAAAAAAAAAAATCATTTGAGCGGCAATCTAGTTATGTCCAGTGGACCAGCCTCTGTGACAATACTTCAACAGTCTTGTAGAATTTCAATATGTGATCATGTCTATATAATATATATCCACTAGAATTTTGTGTCTGCTAAGTGTTAATAAGTGTCCGTTAGGTCTATTAAATTGGTTGGAATAGTTGTAGTTTATCTCTACTATTATAAGAACTGTAAATGTTTTTGCCAAACGTTTGGTACGTCGTCCGTGTTGTATATGTGTTCCCATTTGGTGCATGCGTTGTGCACTCTTGTCCTCTGCCGTCGGTGCGTATGGCCCGTGTTGTTGCCTGGGCTAGGCCCATAGCTAGCTGGCTTCCATTTGAAGTATTTTTGTTGCCGTCCGTATAGGACTCGGTGAGGTGCTGCTGCTTGCAAGCCATGCTGTGGGCTGCCTCTCCAAGGTAGGCCCGCAGTGTGCAAGAAACAATTTCCTTTTTTCCCTGGAGGACCCATCGCATGGTCAATTGGTAAATGAAAAAAATACGAGTTGAATTATCTTTTTTTAGAAACGAATTAAATTATCCGAATGACAAAAAAAGGACTCAAACCGTATATTAAAATAAAATTAAGTTCTTATTGTTTCACATAAATATAGGGGTTGACATACATATTTTTAGGGTTGGTGCCTGTGCCGGTTATCAATTTTTTGGCTAGTCAGTATTTATAATGAAAATTCCTTGTATAATTTTTTGTTAGGAAGGTGGGCATGATTTGAATAGTGTACTACTCATGGGGCAGACTAATTGATGTATGTACCGTATAAAAGAACATAAAAAGATTGAAAGTTTTGTTTATTAGTTCATAATCGGCTTATTATGCTAGAAATTCAGTTCTTTTATCTAAACAAAATCCCATCCCCTCTTGCTCTAGCATATGTCGCCTTCATTACCGTAGAACAACCGCTCTATCTCTCCTTCCACATTGCCATCTTACTTGGTTGTTTGCCGATCATGCTCTCTCTCCATGTACACAATTTGTTCCATTTTCTTCCCATTGCAATGCACGGACACTTTGGCTAGTTCAACTAAAATATTTAGCATATTTTTCGTGTGGCATTTGATATAGGTCTGCAGTGAGCCCGACTGAGGAATGGCCTTTGAAGTATTCCAAGCTGCTTGTTGTAGTATGGATTCTAATCTTCTATTCCACACCTATTTTTTTAATGCATCCGCCAGTTCACTGATGAATTTGAAATACTCCTTCCATATCCAAATAAAGATTATTTTGTGTTTTTGTGGTCTTCAATCCAAGACTTTGACTGCATTGATTTTATAGTAATGTACTAGTAAATTGTAGGAGCTAAATCCACATGTTTTGAAAATACTTTCAAAGGCAAGTATAACAATATTGTTTGTGTGAGGTTTATGTACTTTTTGCATATATTATCTACTTCTAGATAAGGTCACCGTGGGAAGTGTGCTGTCAAACTGAATTTATTCCATTAATAGAAGTGCAGAAATGCATTAGGTGCTAGCAAGCCACCCATCTAGTGCCTAGCACCTAAGTTAACACCGAGAGTGTTATAGGGGTTGTTCATGTAGGATTATGTGATTTGTGACCTGTCTCTGGGTTCTGCTTCTTGGACATATTTATCTTGTTCAGTCTTTTTAATTTTATTAATGATTGAAATATGTATGTTATGCATTGCACTTAAGTTTATTGAAGGATTCTAGTAAATATATTATATTGGAATTCATACTTTTGGTGGTGACTTTGCTTGCATGTTTAATTGTTTTTCCTTCTCTCCATATTGTGAAAAGAATATTACTTTCTGTTTGGAAATGCTCTAATCCCTCATGATACTCCATGCAGTTCAGTCCTGAGGCAGACGTCAACTAATGATCCGTTTAACACTTTAACTTACATCAGGTTCATTTTTATTTCTGTCAACATCACAGATGGATGATGGTTTGGAGTTTTCCTTCACTGATAAGAGGCGTTTTGCAAAAATTCGCTTTCTTGACAATGTAACTCTCTAGTGATTATTTGACTTCAAAGTTTATAGCTTCAGTATGCTGCAGTAATTCACTTTGGAATTTTGTCTGTATGTTATAATAGCCAGAAGCTGTCCCACCAATTTCTGAGCTTGGACCAGATGCCTTATTTGAACCTCTTCATCTTGATGATTTTGTAGAGTCACTAAGTAGGAAAAAAGCTCCAATAAAAGCCCTTTTGCTTGATCAGGTATCAATCTTTAATGCTCCGTTCTCTGATCAAAGATCTGCAGTGTAACAATTGGATATCTGAAATTATGCATGCTTAGTAACAGAAGGCGAAATTTTCCCTTATATATGTGGGAATCAGAAATAACTAAAAAGTTGTCTTTGTCAATTGTTGCCCAGATTTGGTTAGTGAACCTGAAAGTCAGTAATTTGTGTGTTTGACTAGTAAATTAAGATATTACAATTTTATACCCAAATGTAGTCTAAATACCACAGTAAATACTACACTTTTGATTCTGCTAGCTTCTAAGACTGTTTTTCTGAATCATGTTTTTCAGAGCTTTATATCAGGAATTGGCAATTGGATTGCAGATGAAGTGCTTTATCAGGTCAGTTTCCCTAGAGTTGGCTTGAAACTACAGAAAACTGTCACTGTACAAACACATTACATGTTTATTTGCTGACCAAAAACTTTTCGCTGCCCAAACACACAAAATTTTGAATATTGTATCCAGTGTTGTAAAAAATAATTTAGGCCCTGTTTGGTTCATGGGACTAATCCATTAGTCCCTCCATTTTAGTCCCTAAGAATCCAAACAGGGGTGACTAAAAGGGACTAAAAGTGCATATGGGACTAAAATTCCATTAGTCCCTCTTGGAGGAACTTATAGGGACTAAAGTGGCAGCCTCTCTTCTCTCTCCCTCGGTCCACGTGCCTTTAGTCCCTTTTAGTCCCTGAATCCAAACAGTAGGGGCCTAAAGTTTTTAGTCTACGGACTAATTTAGTAATTTTAGTCCAGAGACTAAATGATCCAAACAGGGCCTTAGCTTCATAGGTTGTTTGGAGGCCACGGCAGCAGGCCCAATTGGCACATGTCACAAGCAGCTCGGCTGTGCTGGAAATGGTGCAGTACCTGTGCATGAATTACATGTTTAGTAGTAGTACTCCAATTTGTTAACTAAAGATTAGTTATTTGCTTAGTTATCTGGTTGGCTAGATATTCTTATTTGGGCTTGTCTCGTCATATAAAATTGGCAGCTTTATTTGAGTTTAAGTGTTTGACCATAGAATAATATATTTACCCATATATCGTTCTCTCTTCTCCATCCCATGACCTAAGCCCGTAACACATTCTCTTCTCCGGGCCATCAATCCTGAGCCATTTGTTTCTTCCATGTACCCAATCCTCATGATATAGGCCATAGATGAGATATGATGTTGAACCTAACATGTGGGATTTAGCTTTGGTTTAAGTGATTGTGTCAAATAAAGTGCTACTTCTATGGGAATATCATGTATCCCCATTTAGGCATTTTTTTCTACAGAACACCCAAAAAATTGTGTAATTTGCTGGTAGACATCGCAAAAACATGTCACGGCTGAAAGACGCCCTAGAAAATCGGTAGCTTGCCGGAGGACATTCTCAACTCAATTGGAGTGAGAAATTCTTCAAATAGGGGATAATACCCCTGGAGCCATAGGCTTCAAACATGGTGTTGGAGTGAATATTTGAAAACTATGCAACTGTAAATCTGTCGTTACCCCAACTACATTGCTAGCATACATCATATTCCATCTTCACGACATCCTCAGGTCAGAAGTTTTTTGGCCTAGGGGCATTCTCACCTTTTTGAAAGTGTCCTCCGGCAAATTCCTAGTTTTTTTAGTGTCTTTCAGCCATGACATGTTTTTACGATGTCTGCCAGCAAATTACACAAATTTTGAGCATCCTGTAGTAAAATTTGTCTTCCATTTAACCAACAAAGATGTGGCCTGTTTTAGACATAACCTTCTTTGGGCATCTAAATTGTATAATACTAGGTTATTTTTTGTGTTATTCTTTTCATAAAAAAACATAGGCATGTTTCATCCTTTGCTTGCTTGATGCGTAGGCAAGGATTCATCCAATGCAAACAGCATCGATGATTTCTAAGGAGAAATGCAAGGCACTCCATCAGTGCATTATAGAGGTTAGTGTGATGTGTGTCACATGGTTGTTCTTTAGGAATGGATAGCATGTGGCATCCTATATATTTATAAAGTTCATCCCCACTAAGTTTAGTTAATGCTATTTCTCTCTTCTCTCATGAAGCTACATCACCTTAATTGTTTTTGGCCTTTAGATGATTTCATCAAGGGTGCAAATTGCATCTCCTCCCCAAAAGCCACACCATACAACCCAATCATTTATAACCTTTGGATAATTGATTAATGTACAAAATATATAAGCAAATGAAAGAAAATGGTATAATAAGTAAAAAAGAAAATTTTATAACTCATATCGACTATTTTATCACAATTCTCCCACGGCAACACGAAGGGTACCCATCTAGTTGATTTGTGAACTTGGGTGCATTTTCTATTTATTTATCAATTCAACCATATATAAAAAAATGATTGCATTTTATATACGAATTAGATACTGATATCTGAGTAATGTATCATGTTAGCATATACTGATATCTGAATACTAGATATGCACAGTTGTTTTTTGTGTCTTGCCTGAACTTAAGAAAAACACCTCTTATATAATGTATCATGTTAGCATATACATTGAAAATATAACTGAATATTAGAAATGTTTCAACATATTGGCATATTAAGCCCAATAGGAATCTGGTTTACCTGTTTGAGTATTTTCATCGCAATGTCTTTACTGGCCCAATAATATCGCAATGTCATTATTGGCATAAGGAGTCCATTTCTGTGTATGATAATCTTATTTTTGTGTCTATGACTCTAGGTGATTGAAAAGTCCTTAGAAGTTGGTTGCAACAGCAGTCAGTATCCAGAAAACTGGATATTTCACTCCAGGGAGAAGAAACCCGGCAAGGCCTTTGTGGAGGGTCTGATCATCTTTTCTTTGGTAAAACATGTGTTCGTGATGCTTAGCATTATTGAAGATTGAGTTTTGTTGCTTGCAGGGAAGAAAATTGACTTCATTACAGTTGGTGGCAGGGTAAGTCCTTTACCCATTTGGATCAAGCTCAATATATCTTTCATGCGTTGCGCTGATCGCTGATCCCATTCTCACTTGTTTGTTCAGACTTCAGCATATGTGCCAGAGTTGCAGAAGCTGGACGGGATTGATGCAACAGCAAGCAGAGCGAAAATAAGCAAAGAACAGAGCAAATCAAATAAAGCTGCTCGTGAAGTGGACGATGATGAGGAAGAGGCTAAACCTGCCAAGAGGGGAAGGAAGCAATTAGTGAAGGCAACCCATGAGATCCAAGAGGATGAGGAAGATACAAAAGCATCAAAGAGAGGAAGGAAGCAACCAGCAAAGACATCGAAGGGCTCGTGGAAGAAAGCTCATCATTCTTCTGAGGGTAGTGGTGACGACGACAGTGATGATGAAGCAGTTGATAAGGTGGTCGCGGAACAAGGGAAGAGGAGGGATCCAAAGCAACCAGCAGAGGCGAAAAGCTCGTCAGACAAAGGAGGAAGTGCTGCCCCAGCAAAGAGGCCACAGAGGAAGAAGCGGCAATTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028426