Os11g0158300

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0158300| Description = Pentatricopeptide repeat containing protein| Version = NM_001072337.1 GI:115484286 GeneID:4349834| Length = 2744 bp|...")
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Gene Name

Os11g0158300

Description

Pentatricopeptide repeat containing protein

Version

NM_001072337.1 GI:115484286 GeneID:4349834

Length

2744 bp

Definition

Oryza sativa Japonica Group Os11g0158300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2797685..2800428

Sequence Coding Region

2797877..2798464

Expression

GEO Profiles:Os11g0158300

Genome Context

<gbrowseImage1> name=NC_008404:2797685..2800428 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2797685..2800428 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtcggcactacgccgtccttctccgccgcgccgcctccctgccgtctctccccctcgtggcgtccctccacgcggcggcgctccgccgaggcgccgtcctggccccgtccctcatccacgcctactccgcatgcggcgacctcgcctccgcgcgcaatctgttcgacgaattgcccccgcgggaccggacgctctccgcgcgcacggcgctggccagcgcgatgtccgctcacggccggtgccgggaggtcctcgacctcttcgccggccttgcggaggaggagatggacgacaaggcggtgaccgcggttctcgccgcgtgcgcgagggccgggatggtggacgaagggaggagggtgttcgcgacggtgaggaggaggccggctctgcagcactacacgtgcatggtggagatgctggggcgcgccggcgaggtcgaggaggcggagcgcctggtggcgcggatgggggcgcgcccggacagggtgatctgcgccgtgctcctcgccgcgtgccgggtgcacggccgcgtcgatgtggctgggagagtgcacgggttgatgcgccggtatggcattgcctga</cdnaseq>

Protein Sequence

<aaseq>MRRHYAVLLRRAASLPSLPLVASLHAAALRRGAVLAPSLIHAYS ACGDLASARNLFDELPPRDRTLSARTALASAMSAHGRCREVLDLFAGLAEEEMDDKAV TAVLAACARAGMVDEGRRVFATVRRRPALQHYTCMVEMLGRAGEVEEAERLVARMGAR PDRVICAVLLAACRVHGRVDVAGRVHGLMRRYGIA</aaseq>

Gene Sequence

<dnaseqindica>193..780#gacgagaatacgagagacgagcccctccttctcgtgtccggcgaggacaccggaggcggaggagtaggcagccggacggagcggcggcggcggcggcggcggactcgagtttctccggaggcaatgacgcgcgagaaaagctcaccgtattgctattgactattgaaagcctttacgcaagcagagccggcaatgcgtcggcactacgccgtccttctccgccgcgccgcctccctgccgtctctccccctcgtggcgtccctccacgcggcggcgctccgccgaggcgccgtcctggccccgtccctcatccacgcctactccgcatgcggcgacctcgcctccgcgcgcaatctgttcgacgaattgcccccgcgggaccggacgctctccgcgcgcacggcgctggccagcgcgatgtccgctcacggccggtgccgggaggtcctcgacctcttcgccggccttgcggaggaggagatggacgacaaggcggtgaccgcggttctcgccgcgtgcgcgagggccgggatggtggacgaagggaggagggtgttcgcgacggtgaggaggaggccggctctgcagcactacacgtgcatggtggagatgctggggcgcgccggcgaggtcgaggaggcggagcgcctggtggcgcggatgggggcgcgcccggacagggtgatctgcgccgtgctcctcgccgcgtgccgggtgcacggccgcgtcgatgtggctgggagagtgcacgggttgatgcgccggtatggcattgcctgatttttgcacttgctgcttgaagctcacaaatcctgaaaagttgaagctgattggaaactgatgggaaggtggaaatgtttgttcttcaagtgcattattctgtaattctgcaatgcaatgcagcagaagccccaacggtgcaaccgtgcaatcattgtggtttgaggcttcttttttaatggaggagtttattttcagctcttccgggaattagatcattccttatgaaattcagaaggggctttgcatgatgggtggtgggcattgcatgaatggatgaaccctcgagatcaacttatgtctatgctctcactgaactgtttgatgcgaagagaaatggatggaaaggtggtaaccattgttctggcagtttagagggactgtgtgagtgccaagcaggtgaaaatgtggattctattgaaggctatgtcagtttcatactgtcatgtgtagcaggggcaacattatgacagtgtatgaaccaaatgagtgtcagtcatttccttgctggccttgtatggttgcatactttgacatctaccacactgaaatgccagtcagttttctcattttcagattgtgcctggtcggcttctttcacattgattaatggatccagcagtgcagcacacaaagcagtagctggtaagttgtcaagttaacaaactgaactgtcaaacttgagtaattgctgaagagcaggtttgtcaaaatttctgcaaaactgtcaaacttggatagcaaggcaggaaaagtctattaggactttgtcaagtatgatgtcgctttgctgaaatttattcagaatcaagttatgaatctccattgttctggcaaatctcacgttatgggattgtacctgctgctatgcaatgggtagttagttaattggagcttgcaatctcctgtgcctacagccttgtgaggggctaccatgagtgaattatgcgttcgcaaaaaaataccatgaatgaattatcagttgtgaacttgtgaatttgttttatctcgagttggtgtgaataacttgtctggcatttgattggagctcttgggatccttcagataacttggatatggctgtaaaagaataaagagttgggcctacgagttcaagactctgatagactgatgctggcaacctgattgtgcaaactggcaggaaaaagaggtaagacaaatacaggagtgccatctccatcttaaccttttcttgagtcttgatgaattgatgaagaaaaagagccataattttcacggctgccagagcaactctttcctgtgccagacattgctatgctgaattgctgatgctgacacttgtagatgactagagaaacatcagcaacacatggttggcggccaagaaaccctgcactgcaaagcagcttcctgcccaggaaatatactgaagatgaacttgactgcaatggcgctttctgccgaaaaatttgcaccgcgcatttttccttccacaggttacaggtacagtttctctcgagaatgtaccagattcagatcccccgtgtcacagtgagtggcgtttcctcaacggttgtttgccaagaacaaacacagccgttgctttcgatgttgtgatggatctggagtgaaagtctgcatgattccaaactgaagttgccgtgcagaagtatgttagtgttgcttgcagtcttgttttgtcattcgtgctaatctgaatgagtacttccagcaagtgtgtttctcgtgtctgtcttttgctgctaatggatatgtcttgtgttctgctaaccacacttgaattcagtttgtttgtttggcctggaggtcttcaaatttcagccagttttttcttctctggatcactatttcgcgttatatacagactgattaatttctttcagttgtaacttggtctctcttttttcccctgatgtaaagttagtgcatgatgagaaatgtgattaccttgtagttggacc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0158300, RefSeq:Os11g0158300