Os11g0158400

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0158400| Description = Similar to Digalactosyldiacylglycerol synthase 1| Version = NM_001072338.1 GI:115484288 GeneID:4349835| Length = 476...")
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Gene Name

Os11g0158400

Description

Similar to Digalactosyldiacylglycerol synthase 1

Version

NM_001072338.1 GI:115484288 GeneID:4349835

Length

4762 bp

Definition

Oryza sativa Japonica Group Os11g0158400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2800813..2805574

Sequence Coding Region

2800999..2801439,2802684..2802716,2803191..2803278,2803386..2803867,2803954..2804220
,2804357..2804706,2804798..2805347

Expression

GEO Profiles:Os11g0158400

Genome Context

<gbrowseImage1> name=NC_008404:2800813..2805574 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2800813..2805574 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccagctacggcgtcgacacgcggccggcggccgcggcggcgggaggcgggggagcgggagcgggagcggcgggggagggggcgctgtcgttcctgtcgcgcggcctccgggaggacctgcggctgatccgcgcgcgggcgggggagctggagacgttcctgaccgcgccggtgccggagccggagctgctcgcgcggctccggcgcgcgtactcgtcgtcggcggggaccacgcggctggacctgtcggccatcgggaaggcgttcgggacgggggtggtggggagggggagcaggggggcgaggtgggggtgggaggaggtccaggaggccgaggagtgggagcccatacggatggtcaaggcgcgcctcagggagatggagcggaggcggcagtggcaggccaccgacatgctccacaaggtcaagctcagcttgaaatcaatgagctttgtacctgaagcatctgaggaagttccaccgctagatttaggtgaactcctggcatatttcctaaagcaatctgggccattgtttgaccaacttggtataaaaagagacgtgtgcgataagctggtggaatctctgtgcagcaaacgcaaggaccaccttgcatataattcatttccagcaagtgaaccatccgcattcagcaatgacaatgctggtgatgaacttgacctaagaatagctagtgtcgtgcaaagtacaggacacaattatgaaggtggattttggaatgatgggcataaatatgaaacagctgacaagaggcatgttgcgatagtcaccactgccagtcttccctggatgactggaacagctgtaaatcctttatttcgagctgcttacttggctaagtcttccaagcaagatgtaaccttggtggtgccttggctttgcaagtctgatcaagaacttgtgtatcccaatagcatgacatttagttctccacaagaacaagaagcttatatgaggagttggctggaagaaagggttggtttcaagacagacttcaaaatatcattctatcctggaaagtttcaaaaagaacggagaagcataattcctgcgggggacacttcacaatttataccatcaaaggaagctgacattgctattttggaagagcctgagcacctgaactggtaccatcatgggaaacgttggactgataaatttaatcatgttgttggtgttgtgcatacaaattatttggagtacattaaaagggagaagaatggtgttattcaagccttttttgtgaagcacatcaacaatttggttgccagagcatattgccataaggttttgcgactgtcaggagctacacaagatctccccaagtccatgatctgcaatgtacatggtgtcaatcccaagtttcttgaggttggagagagaattgcagcagagagggaatctggccagcattctttctccaaaggagcttattttctagggaagatggtctgggccaaaggttacagagaattgatagatttgtatgccaaacacaagagtgatttggaaggcatcaagttggacatctatggaaatggtgaagattcacatgaggtgcaatcagcggctatgaagttgaacctaaaccttaactttcataaaggccgggatcatgcggatgattctcttcatgggtacaaggtttttataaatccaagcattagtgatgtcctttgcactgcgaccgctgaggcattagcaatgggtaagtttgttgtctgcgcagaccacccatcgaatgattttttcaggtcattcccgaactgtttgacatataaaacatcggaggactttgtcgcgaaagtgaaggaagcaatggcacgcgatccacaacccctcacacctgagcagagatacaacttatcctgggaggccgcaacacagagattcatggagcactccgagctggacaaggtcttgagcagcagcaacagggactgcaccaccagcaccagtggatgtggtaaaagtggagacaataagatggaaaaatcagcctcgttgccgaacatgtcagacatggtagatggtgggctggccttcgcccactactgcttcactggcaatgagctcctcagactgtcaaccggagcaatacccggcaccctcaattacaacaagcaacatagcttggacctccacctcttgccgcctcaggtacagaacccagtatacggctggtaa</cdnaseq>

Protein Sequence

<aaseq>MASYGVDTRPAAAAAGGGGAGAGAAGEGALSFLSRGLREDLRLI RARAGELETFLTAPVPEPELLARLRRAYSSSAGTTRLDLSAIGKAFGTGVVGRGSRGA RWGWEEVQEAEEWEPIRMVKARLREMERRRQWQATDMLHKVKLSLKSMSFVPEASEEV PPLDLGELLAYFLKQSGPLFDQLGIKRDVCDKLVESLCSKRKDHLAYNSFPASEPSAF SNDNAGDELDLRIASVVQSTGHNYEGGFWNDGHKYETADKRHVAIVTTASLPWMTGTA VNPLFRAAYLAKSSKQDVTLVVPWLCKSDQELVYPNSMTFSSPQEQEAYMRSWLEERV GFKTDFKISFYPGKFQKERRSIIPAGDTSQFIPSKEADIAILEEPEHLNWYHHGKRWT DKFNHVVGVVHTNYLEYIKREKNGVIQAFFVKHINNLVARAYCHKVLRLSGATQDLPK SMICNVHGVNPKFLEVGERIAAERESGQHSFSKGAYFLGKMVWAKGYRELIDLYAKHK SDLEGIKLDIYGNGEDSHEVQSAAMKLNLNLNFHKGRDHADDSLHGYKVFINPSISDV LCTATAEALAMGKFVVCADHPSNDFFRSFPNCLTYKTSEDFVAKVKEAMARDPQPLTP EQRYNLSWEAATQRFMEHSELDKVLSSSNRDCTTSTSGCGKSGDNKMEKSASLPNMSD MVDGGLAFAHYCFTGNELLRLSTGAIPGTLNYNKQHSLDLHLLPPQVQNPVYGW</aaseq>

Gene Sequence

<dnaseqindica>187..627#1872..1904#2379..2466#2574..3055#3142..3408#3545..3894#3986..4535#gttgattccgcgcattagccaccccacctctccgcgtgggccccgccaaatctcctcttctcttcttccaccgccgcggcggcttcgcttcgcttcccaatccttcacatccaccaccgcctcctcctcctccccgcacgcctcgccgtcgccggcgaaaaccctagcggcgatctcctcgtacccatggccagctacggcgtcgacacgcggccggcggccgcggcggcgggaggcgggggagcgggagcgggagcggcgggggagggggcgctgtcgttcctgtcgcgcggcctccgggaggacctgcggctgatccgcgcgcgggcgggggagctggagacgttcctgaccgcgccggtgccggagccggagctgctcgcgcggctccggcgcgcgtactcgtcgtcggcggggaccacgcggctggacctgtcggccatcgggaaggcgttcgggacgggggtggtggggagggggagcaggggggcgaggtgggggtgggaggaggtccaggaggccgaggagtgggagcccatacggatggtcaaggcgcgcctcagggagatggagcggaggcggcagtggcaggccaccgacatgctccacaaggtcaagctcagcttggtgagattccatacttcctggagactttaccgaactcttactgattgcccctggaagcaggaataacttaaattgagtacgatggtgaaaggaataataattgatatggttaggttcactttcgatgtgtgtttcattccgggatttattagcctggtattggagaaattttgtggttctcttgagctccatatcgaattttatagtacagcctgggacaaaaaagaaatattgcagggtgatcaagttgaaatggggtcaactgaaatgctcaggttaatatgtgacaggcttgggaaatatgaaacggatcaaattggtcttctagggtagcttagctattagttattatggttcatagctgtacttgtagttgaaaactggagtatacaacctcaacatgatgttcaaattgatctcggtagctattccccaatatctgcccatcatatcaacatgatgctcaaattgatctcggtagtgattcctcaatagtcaatattttcccatcatatcttataaagatcaaaactctggaagaaattaagcgataagggtgctaggcaagtcttaggcatattccatgccttgtgatttttagcttttcagaggttgattaattcaaattgaaaattttctacaaaatgggctagtgaaaaattagtaccgattggaactggaggctcaaatgttaaactgatgctacactctgtaatgagttaatggtacctgaaaatctaaccaactctcgttttccatgtttggatttatggttgcctttagacttaacaaagagtgcaaagcccacatgaatgaattgtattgattcaaaagggagtacatggggtgaaaaaaagaccatgttgaacacagtagcaatggcccccaaggcatatatgcagagtagtgggaggttttgctatggaaaatagaatatctgaagctatatttgtaacttcttgtttactgtgaatctgtgatgtgagtgaagaatttcaaattttacttagatgtatcagcaattgaaaaataaacttgtagttatcaaatattgtttctgattgcttgcttgtaaatgcacagatcttaattaggcttattctttacacgctacagcctgctctagtaacctacgaatagaacacatgttttttttttgacgcaaaaggtagagagactctaccttgaatagaacacatgtatgatctcactatattgatgtaccattctgttctttattgcagaaatcaatgagctttgtacctgaagcatctgaggtagtaatcttgtttcatatcctcttgcaatatgcattcaagaatgaccattttatacacatactagtgtttgtttgtcattgtcaaggaatttacttctcccagtatgaatgccttgtaaagttgtagtacagactagcaagggtttttttaatatgaaggaattaattctgcaaaatgttgccttcagttcatttctgctgtgtatgtactactaattttggatgtgtagagttctgtttgtttccagaacgaagaccatagaactgttgttttgtatatcactgttcagatatatttgtatcatgttacctcattaaatcttttgtctaaataaacttgaccatcaaattttttataaaaaaatttaaccatgccaccttgtgatcttcagaacatggtttcaacagcattgatatgttgataacactgcgtgatttattcattgctttaatcagtactgttgtaatgtaggaagttccaccgctagatttaggtgaactcctggcatatttcctaaagcaatctgggccattgtttgaccaacttggtataaaaagaggtatgaagtttgactttatttttttattgcattctagatcttcagagattttatattttgaagtttgagactatgttgagctgatttttctttgtcatatgctatagacgtgtgcgataagctggtggaatctctgtgcagcaaacgcaaggaccaccttgcatataattcatttccagcaagtgaaccatccgcattcagcaatgacaatgctggtgatgaacttgacctaagaatagctagtgtcgtgcaaagtacaggacacaattatgaaggtggattttggaatgatgggcataaatatgaaacagctgacaagaggcatgttgcgatagtcaccactgccagtcttccctggatgactggaacagctgtaaatcctttatttcgagctgcttacttggctaagtcttccaagcaagatgtaaccttggtggtgccttggctttgcaagtctgatcaagaacttgtgtatcccaatagcatgacatttagttctccacaagaacaagaagcttatatgaggagttggctggaagaaagggttggtttcaagacagacttcaaaatatcattctatcctggaaaggtaagggttctcttttcataacaagtgaataaccttgcaacattgtgttcattacttgtctaatatcaattgtttgcaaagtatagtttcaaaaagaacggagaagcataattcctgcgggggacacttcacaatttataccatcaaaggaagctgacattgctattttggaagagcctgagcacctgaactggtaccatcatgggaaacgttggactgataaatttaatcatgttgttggtgttgtgcatacaaattatttggagtacattaaaagggagaagaatggtgttattcaagccttttttgtgaagcacatcaacaatttggttgccagagcatattgccataaggtactcaattaagtagggtctgcaatgttcaagtgtgacagtgtgaagtttctatcatgtagctaacgcataagtattcaaaaattatgtaatttagttgattttccttactgagctgatggttggtacaacgtaggttttgcgactgtcaggagctacacaagatctccccaagtccatgatctgcaatgtacatggtgtcaatcccaagtttcttgaggttggagagagaattgcagcagagagggaatctggccagcattctttctccaaaggagcttattttctagggaagatggtctgggccaaaggttacagagaattgatagatttgtatgccaaacacaagagtgatttggaaggcatcaagttggacatctatggaaatggtgaagattcacatgaggtgcaatcagcggctatgaagttgaacctaaaccttaactttcataaaggccgggatcatgcggatgattctcttcatgggtaaaagacagagcctctcactgcctgacatcttcctacatctttagatatagttaatttgaatgtttttcctgttttttttttctttcaggtacaaggtttttataaatccaagcattagtgatgtcctttgcactgcgaccgctgaggcattagcaatgggtaagtttgttgtctgcgcagaccacccatcgaatgattttttcaggtcattcccgaactgtttgacatataaaacatcggaggactttgtcgcgaaagtgaaggaagcaatggcacgcgatccacaacccctcacacctgagcagagatacaacttatcctgggaggccgcaacacagagattcatggagcactccgagctggacaaggtcttgagcagcagcaacagggactgcaccaccagcaccagtggatgtggtaaaagtggagacaataagatggaaaaatcagcctcgttgccgaacatgtcagacatggtagatggtgggctggccttcgcccactactgcttcactggcaatgagctcctcagactgtcaaccggagcaatacccggcaccctcaattacaacaagcaacatagcttggacctccacctcttgccgcctcaggtacagaacccagtatacggctggtaagatactccatatatacaattagtagtagtatttctctcagcacatagatagctctgtaatttgtttgtaacactagttttcgtttttctttttgtctaccatatgccgaaggcaatcttgttcattattattgcaaactactactacagtactactacaaactacatgtgttagatagaagtgccattttcactggccttcatattcatattaaagcagagttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0158400, RefSeq:Os11g0158400