Os11g0158600

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0158600| Description = POX domain containing protein| Version = NM_001072340.2 GI:297611275 GeneID:4349837| Length = 5195 bp| Definition =...")
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Gene Name

Os11g0158600

Description

POX domain containing protein

Version

NM_001072340.2 GI:297611275 GeneID:4349837

Length

5195 bp

Definition

Oryza sativa Japonica Group Os11g0158600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2821626..2826820

Sequence Coding Region

2821626..2822438,2822564..2822624,2824157..2824539,2826041..2826820

Expression

GEO Profiles:Os11g0158600

Genome Context

<gbrowseImage1> name=NC_008404:2821626..2826820 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2821626..2826820 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgtactaccacggcggcgccggcacggacatccagtccggcaccgacggcctgcagacgctgtacctcatgaacccgagctacgccggctacggcgacgccgccgccgccgccgccgcgcccggggcggcggccaacatgatgctcctgaactcggcggtgacctccatgacgccggtgtcgttcggccaccagccgtcgccgtcgtcgtcgtcggcggcgcagcacttcgtcggcatccctctccaggcgccgccggcttccgggtacaacctgtggaccccggcggcggccaccggcgcgggcgacatgtcgccgccgacgccgcagcaccagcatcagcaagctcacggcggtggcgcggcgggtgtcagtgctgtcctcagcctgtcgtcccgcgaggcggcgccgccggtgacggtggcggccgtggtggccgccggcgacgaggggaagtacctgcaggcggtggcgcagggcgcggcgtcgcacgggcagatggtgatgagctccaagtacctcaaggcggcgcaggagctgctcgacgaggtggtgagcgtcagcaagggcgtggacgacgtcaaggccgccgcggcggcgaagagcccggcctcggtgaagaagaaggaggactcggagggcgtgtccggcggcggcacggaggatggcggcggcgccaagagcggcggcgcgccgccgccgccggagatgtcgacggcggagcggcaggagctgcagatgaagaaaggaaagctgattaacatgcttgatgaggtggagcagcggtacaggcagtaccaccagcagatgcaggtggtggtggcgtcgttcgaggcggtggcggggggcgggtcggcgaggacgtacacggcgctggcgctgcggaccatctcgcggcagttccggtgcctgcgggacgcgatcgcggggcaggtgagggcggcgagccgggcgctgggggaggccgtcgacgccgacggcggatgcggccgcacggtggggtccaggctccggtacatcgaccaccagctccggcagcagcgcgcgctgcagcagctgggcatgatgcagagcagcgcgtggcgcccccagcgcggcctccccgagcgctccgtctccatcctccgggcttggctcttcgaacacttcctccacccatatcccaaggattcggacaagatcatgctcgccaagcaaaccggcctcaccaggagccaggtttcgaactggttcatcaatgccagggtgaggctgtggaagccgatggtggaggagatgtacctggaggagaccaaggaccaggacggcggcggcggcgccggcgccggcgacgaggggagcaagcccggtgggagcaagggcggcggcgccggcgtcaatggcggtgtggttgacagtgccgcgaagatggacagcaaggcggcgcacatggagagcggcggcggcgtacatccgtcgctgctcgagctcgccggtgaccaccaggcgcaggcggggttctacgacgacgacgacgaggatggcggcgccgccgccgcgctgcagcagaagctgaagaaggcgaggacggaggagcagcagcaggcggcgttccacgtgtccgacgtggccacgctgcacgcgcatgccgcggcggcggcggcggcgaggcacgacgaggtgagccaccgggagctcctcatgaagttcatggagagcggcagcgccggcgccggcgccggcgccgccgcgagggaccaccaccacgaacaccatggcggcgtcggctactcgctgttcgcgccggcgccgtacgggcagttcgccacggagcagttcgcgttcgccggccacggcggcggtggcggcggcggcggcgtgtcgctcacgctcggcctcccgcacggcgccgagcagacggcgtcgttcctcatgaccagcagcaacggcagcgacggcgccggccacgtcgccggcggcggcggctacgacatgaacatgcagagcacaaagtccttcgcggctcagctcatgagagacttcgtggcctag</cdnaseq>

Protein Sequence

<aaseq>MAAYYHGGAGTDIQSGTDGLQTLYLMNPSYAGYGDAAAAAAAPG AAANMMLLNSAVTSMTPVSFGHQPSPSSSSAAQHFVGIPLQAPPASGYNLWTPAAATG AGDMSPPTPQHQHQQAHGGGAAGVSAVLSLSSREAAPPVTVAAVVAAGDEGKYLQAVA QGAASHGQMVMSSKYLKAAQELLDEVVSVSKGVDDVKAAAAAKSPASVKKKEDSEGVS GGGTEDGGGAKSGGAPPPPEMSTAERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVV ASFEAVAGGGSARTYTALALRTISRQFRCLRDAIAGQVRAASRALGEAVDADGGCGRT VGSRLRYIDHQLRQQRALQQLGMMQSSAWRPQRGLPERSVSILRAWLFEHFLHPYPKD SDKIMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEETKDQDGGGGAGAGDEGSK PGGSKGGGAGVNGGVVDSAAKMDSKAAHMESGGGVHPSLLELAGDHQAQAGFYDDDDE DGGAAAALQQKLKKARTEEQQQAAFHVSDVATLHAHAAAAAAARHDEVSHRELLMKFM ESGSAGAGAGAAARDHHHEHHGGVGYSLFAPAPYGQFATEQFAFAGHGGGGGGGGVSL TLGLPHGAEQTASFLMTSSNGSDGAGHVAGGGGYDMNMQSTKSFAAQLMRDFVA</aaseq>

Gene Sequence

<dnaseqindica>4383..5195#4197..4257#2282..2664#1..780#atggcggcgtactaccacggcggcgccggcacggacatccagtccggcaccgacggcctgcagacgctgtacctcatgaacccgagctacgccggctacggcgacgccgccgccgccgccgccgcgcccggggcggcggccaacatgatgctcctgaactcggcggtgacctccatgacgccggtgtcgttcggccaccagccgtcgccgtcgtcgtcgtcggcggcgcagcacttcgtcggcatccctctccaggcgccgccggcttccgggtacaacctgtggaccccggcggcggccaccggcgcgggcgacatgtcgccgccgacgccgcagcaccagcatcagcaagctcacggcggtggcgcggcgggtgtcagtgctgtcctcagcctgtcgtcccgcgaggcggcgccgccggtgacggtggcggccgtggtggccgccggcgacgaggggaagtacctgcaggcggtggcgcagggcgcggcgtcgcacgggcagatggtgatgagctccaagtacctcaaggcggcgcaggagctgctcgacgaggtggtgagcgtcagcaagggcgtggacgacgtcaaggccgccgcggcggcgaagagcccggcctcggtgaagaagaaggaggactcggagggcgtgtccggcggcggcacggaggatggcggcggcgccaagagcggcggcgcgccgccgccgccggagatgtcgacggcggagcggcaggagctgcagatgaagaaaggaaagctgattaacatgcttgatgaggtcagtaattaattaattaattaattaattaattgagcactgttagtttttttctttttgttttttgtgattagaaaaacgcaagtatattgcttgtattatagataaatcgattactattgatttttcttgtgtagttataggaacatattttttgtgcaaatgcaacttgtattcttttgctgtttggagtttgggttaattgttttaattttctgataaaataaatatttcttgtgaaaagttgatttttctctctctctcaatctggcttgaagatattgctgatgcctttgtaattttcttgcccctactgttatagaaagtgttattgagaggatgtgagtcatttgcttttcggttatccttgttttgttggttcttttctatgattgatcagctaacacagttgttggaacagtagagagctagccttattttgctggacattattcccaatctgtttttcactttaattagttttcgtaagtaaacatgttttactacctagtaccaattatcatcggtcctcaggttaactatgtgattagttagtgcttttttgtctgattggttccttagctagattcaaaaactagttttatttttaggtgggtgttattatcatcaagttaaaaggggcatatatacacatataaattaaaatattctatatatcttattattagactgaaaaatacggaataaagtgacaagtaacaagaatatgtgtaccgaaactaacaagtgacaagtagcaatcctttttgcattcctatgattgaattttcagataagaatagcatgtccacataaactacaattctttgggtcgttctttgttcatgccagtacaaacaagctttaattaattcctaataataatgatgtttgcgtgtgtgtctttttgtttacattagctttacatatttgtacataatataattctctgattttggtacaaagcagcagctttgattaatctaagttacagtggggtgcagtaaaaatgtactccctccatcccctaatacaaggaatttgatattttgcttccactatttgaccatttgtcttattaaaaaaaaattggagttattatttttttacttacttattatgcaaattactttaagcacaacttttcttttttatatttgcacaaatttttttaataaaacgagtggtcaaacagtgcaagaaaaatgtcaaaatcctctgtactatgggacggagggagtataaaaacagttgcaccaaacttcctaaaaaaaacagatgcaaccaaagtaacaagaatcaatcatattggtgccttaaacaatgaaagatagattgtgttcctgacgatccaaaatcgttaatctaccattcaaccaacaaactgctggactaataattaatcatcagctagctgttgtacagtgagtagctatctactccaattaattaagcacaatcaactaatgaatctccatggatgggatgggatgggatgcaggtggagcagcggtacaggcagtaccaccagcagatgcaggtggtggtggcgtcgttcgaggcggtggcggggggcgggtcggcgaggacgtacacggcgctggcgctgcggaccatctcgcggcagttccggtgcctgcgggacgcgatcgcggggcaggtgagggcggcgagccgggcgctgggggaggccgtcgacgccgacggcggatgcggccgcacggtggggtccaggctccggtacatcgaccaccagctccggcagcagcgcgcgctgcagcagctgggcatgatgcagagcagcgcgtggcgcccccagcgcggcctccccgagcgctccgtctccatcctccgggcttggctcttcgaacacttcctccacccgtatgtccatatatttatccatcattcttcatccatctcttccggctccctccgtttcatattataagtcgttttcattgcatctcatccatcattcttccatttgcattatactccctagctccatccctaaatgtttgacgccgttgacttttttaaacatgtttgaccgttcatcttattcaaaaaatttaagtaattattaattattttcctactatttcattcattgttaaatatacttttatgtatacatatagttttacatattccacaaaagtttttgaataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaacatttagggaatgagggagtatatgttgcatctcatctctcttctagtatttctatttttcttcttttaagataatggattaaaacccgagctcttatccggtggtggagccagaaagatttttgagcccggacaaactttaatacaattagtatttgctatagaaatttcatcataatattaaaatttaatggagttttctgataaaaaaaaatttaatggagtttttgcccgctcgcctggccgagcagtggctccgcccctgctctcatcaatctcgacatatatatactccctctatttctttttgtttgacgttggcatatattatgggatggggataggacatccgtgcatgcgtgcatacaaagctacgcgattgtttgagttatgacgattgataagccatagaagaatgaatgaagcaacggaaaataatttaggggataaaacttttatatatatgtgttattaccgatttaaaatcaagtgctagaagatagactagaaatagaaaccctagatcaaccgtagaattaagttttggaatttaaattttggttatatactagctgataagttaacgagtagataatgagagactaaattataatgaattttcgatcatataatctactaaataatttagagtaccttacggtaaaagttgagacagtaattgctaaacgaccataagtatatttggaaactgaggtaacatatactctctttgtagtaaaaaaaaaacaaaacaaaaaaaaaacaaccccgagaatgtatctgaacaagatgcatgttcagatacatccacaagattgattttttttttgggtagagagggagtatagcactatactgtgcgaaccttagttgcatctgtgaagaagaaataggcagagcgtagtacaatagcttgagacagtcatatatgcaagttgcagttgcagctagctgaacgtacgatcatgtctggctgtacttgtacttgtagtgtttgtcaccattgctggctggtcctacaccctaattgcagtactccatggccatggatgatgctactgcatatatcatggccggatccatgcatgtcgcgtgcatgcatgatgcgtttttatttgcaactgcctgaatctgtactacgtgtgatcgatgtgtgtctgtcggatcactcactcatcagtgtccgtgacgtcatgcagatatcccaaggattcggacaagatcatgctcgccaagcaaaccggcctcaccaggagccaggtcagaattaagatggagtttaatttttttactgtgttgattgattggtttttgattttactgcgtgttcttcttggttgaattgggtgttgaattttgtgaattttattttggtttgatttcaggtttcgaactggttcatcaatgccagggtgaggctgtggaagccgatggtggaggagatgtacctggaggagaccaaggaccaggacggcggcggcggcgccggcgccggcgacgaggggagcaagcccggtgggagcaagggcggcggcgccggcgtcaatggcggtgtggttgacagtgccgcgaagatggacagcaaggcggcgcacatggagagcggcggcggcgtacatccgtcgctgctcgagctcgccggtgaccaccaggcgcaggcggggttctacgacgacgacgacgaggatggcggcgccgccgccgcgctgcagcagaagctgaagaaggcgaggacggaggagcagcagcaggcggcgttccacgtgtccgacgtggccacgctgcacgcgcatgccgcggcggcggcggcggcgaggcacgacgaggtgagccaccgggagctcctcatgaagttcatggagagcggcagcgccggcgccggcgccggcgccgccgcgagggaccaccaccacgaacaccatggcggcgtcggctactcgctgttcgcgccggcgccgtacgggcagttcgccacggagcagttcgcgttcgccggccacggcggcggtggcggcggcggcggcgtgtcgctcacgctcggcctcccgcacggcgccgagcagacggcgtcgttcctcatgaccagcagcaacggcagcgacggcgccggccacgtcgccggcggcggcggctacgacatgaacatgcagagcacaaagtccttcgcggctcagctcatgagagacttcgtggcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0158600, RefSeq:Os11g0158600