BGIOSGA028486

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Revision as of 07:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028486| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028486, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA028486

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028486, complete gene.

LocusTag

OSJNBA0062G05.10

Ensembl Transcript ID

BGIOSGA028486-TA

Ensembl Protein ID

BGIOSGA028486-PA

Length

4821

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16332278..16337098

Sequence Coding Region

16332278..16332505,16333126..16333272,16333343..16333675,16333790..16333853,16334694..16334746
,16335018..16335073,16335756..16335824,16335957..16336142,16337011..16337098

Genome Context

<gbrowseImage1> name=IndicaChromosome08:16332278..16337098 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:16332278..16337098 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGGTGGTACGGGCGGCGCTGCTCCTCCTCGTGGCACTCAGCGCACTCTCGCTGCTCGCCGCGGGGTCTCGGAACGACCGCCATGCCGGCCTCGGTCTCGCCACGCTTCTGCCCATCCACAGCTGTCCCCGGCAAGCCTCCCCCAGCAACATCGTCGCGGTGGCTAGGCACTGTGATGGCGGCGAGCTCCTAGCCGTCAGGATCGGCCGGAGGAGCGAGAAAAGGAGAAAGAAGGAAGGAACACGAAGGAAGGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCCGCGTCGGCCACTCCGGCCGCCGCGTTCCTCGCCATGCCCGGCTGGACCCCTGGCCCCTCCATCCCGGACGGCGTGGAGAGCTTCGCGAACGGCGCGGGGGTGCGGCTGCTGCGGCACGCGCGCGGGATCGTGGAGGAGGACGACCTGGACCTGCGGTGGGAGGCCGCCACGGGGGAGCGCGTCTCCGAGGTGGTCCTCCTCAGCCGCCACACCGCCGTCTCCAACCGACCCGCGCTCACCGTCCACCCCATCGGCGTCCCGCACCTCAGGGACGGCGTGGACGTGCCGCCGCAGGGCGGGCGCCCCGGGTGGGCCGCGCCGCCCAACCCGCGGATCGGGCCCTGGCTCCGCCTGCTCCGCCGGATCGCCGCCGACCGTGGCCTCGTGCCGGAGTTTGAGATTACGCTGGAGGGCACTCACCATGGGCCAGTGACCAACACGCCGACGCTGTTTGTTGAGATTGGAAGCACTGAAGAATACTGGGGTAGACAGGATGCTGCTGACGCAGTCGCTCTGCTGCTATGGAAAGGACTTGGTCTTGGAGAAGAAGAATCTGTTGGAAATTGGCATGGGAATGGTGAAAAAGTCCTTCTAGGCATAGGAGGTGGTCATTATGCTCCTCGTCATATGGATATTGTAACGAAAGATGGTGTATGGGTGGGCCACTTGCTCTCTGGGTATTCTTTGCCAATGGAGGAACCGAAGCAGATGAATGGTAAAAATGTGGCTGACGTTGGCGGTATGTGGAAGCATTCCATTAAAGTTTCATATGAAGCAACAAAAGCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGAGCTTCAAAGGATGGCAAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAAATGATTTCTTTTAA</cdnaseq>

Protein Sequence

<aaseq>MTVVRAALLLLVALSALSLLAAGSRNDRHAGLGLATLLPIHSCPRQASPSNIVAVARHCDGGELLAVRIGRRSEKRRKKEGTRRKEGGDVEMVVLVVATTSDAASATPAAAFLAMPGWTPGPSIPDGVESFANGAGVRLLRHARGIVEEDDLDLRWEAATGERVSEVVLLSRHTAVSNRPALTVHPIGVPHLRDGVDVPPQGGRPGWAAPPNPRIGPWLRLLRRIAADRGLVPEFEITLEGTHHGPVTNTPTLFVEIGSTEEYWGRQDAADAVALLLWKGLGLGEEESVGNWHGNGEKVLLGIGGGHYAPRHMDIVTKDGVWVGHLLSGYSLPMEEPKQMNGKNVADVGGMWKHSIKVSYEATKAAFPGGEIIAHIDQKSFKGWQKNAITSYLQELNIRVGKPNDFF</aaseq>

Gene Sequence

<dnaseqindica>1..228#849..995#1066..1398#1513..1576#2417..2469#2741..2796#3479..3547#3680..3865#4734..4821#ATGACGGTGGTACGGGCGGCGCTGCTCCTCCTCGTGGCACTCAGCGCACTCTCGCTGCTCGCCGCGGGGTCTCGGAACGACCGCCATGCCGGCCTCGGTCTCGCCACGCTTCTGCCCATCCACAGCTGTCCCCGGCAAGCCTCCCCCAGCAACATCGTCGCGGTGGCTAGGCACTGTGATGGCGGCGAGCTCCTAGCCGTCAGGATCGGCCGGAGGAGCGAGAAAAGGGTAGAAGAAGAAGTGTGGTTGACAGTGGGCCCACCGTTTTTCTTTTATCAGTCACGGACAGGTGGGTCCCACCTGCTGACTCAGCAAGCCAACAGAGTCAAAGATGCCATGTAGGACAAAACCGCTCGGAGAGTTGATTTGCAATGGTTTTCAAAACCGCCCGGAGAGTTGATTTGCAATGGTTTTCAGAGTTGGGGGATGGGTTATACCCGGTTTTGCGGTTGAGGGATGCTATTCATACACGGCCATGAGTTGAGGGAGAGAATGTGGACTTATTCCATTCCAACCAGACAACGAAGGGCCCACGGCGCAGTCAGACTTGTTGTTCGATTTCGCCTCCCCTGCAAGCCAGCCCGCATGGCCAGATCGCCGGCGCCGACGCGCACACACCCCGTACGTACGCACGCCCATTGTTCGTGACCTCCCCAACTTTCCCACGGGCGGCCACCCAGTCCCAGCCACCCCACCAACACCAAGCTTTCGCGTCTGCCGACCAAGACGAACCCAATTTGACTGCCGCTGACCTGTGGGCCCCACAACCACCCCATAAATAAAGCAACACAACAACGACGCCGTAACGAAGGAGCAGCAGTTGCAGCAGCAGCAGTGTCTTCTTGCAGAGAAAGAAGGAAGGAACACGAAGGAAGGAAGGCGGCGACGTCGAGATGGTGGTGCTGGTGGTCGCCACGACGTCCGACGCCGCGTCGGCCACTCCGGCCGCCGCGTTCCTCGCCATGCCCGGCTGGACCCCTGGCCCCTCCATCCCGGTACGAATGCCTCGCCCTCGCCCTCGCCACCGCCTTCCTCCCTGCCTAACTCTTCGCGCGGCCGGCGCAGGACGGCGTGGAGAGCTTCGCGAACGGCGCGGGGGTGCGGCTGCTGCGGCACGCGCGCGGGATCGTGGAGGAGGACGACCTGGACCTGCGGTGGGAGGCCGCCACGGGGGAGCGCGTCTCCGAGGTGGTCCTCCTCAGCCGCCACACCGCCGTCTCCAACCGACCCGCGCTCACCGTCCACCCCATCGGCGTCCCGCACCTCAGGGACGGCGTGGACGTGCCGCCGCAGGGCGGGCGCCCCGGGTGGGCCGCGCCGCCCAACCCGCGGATCGGGCCCTGGCTCCGCCTGCTCCGCCGGATCGCCGCCGACCGTGGCCTCGTGCCGGAGTTTGAGGTGATTACTTTACTTGTGTTTTTTTTTAATTTTGCTTTTTTAATTTCCTTTGTGGAATTGGGGATCGCGGTTGTTTGCATTGGTTGATTGATTGATTGGTTCTCGTTTCTGCAGATTACGCTGGAGGGCACTCACCATGGGCCAGTGACCAACACGCCGACGCTGTTTGTTGAGATTGGTACGAAATTCTCCACACCTTTTCTTTCTGGGGTTTAATCCACCATGTTTACTTAATTATTGCTCGACAGCCAGACATATCTCACAAATTAGATTATTCATAGTGATTTCTGGATAATGTTTTGTAACTTCATCTTAGTTGATCAACTTAAGTTCATTAAGTTTATTCTTTGTTTTTTCTGTTCCCCTGATTCATTTTTGGACAGGACAGTTTATCTGTAAGTTGCATAGGCTAGGAATTAATGCCTGCACCCCGTCATTGATGAACATTGTATTGAATCCTAAAATTATAGGGTGAGATCTTGGATTTTATACTGACGGCCGAAAGGTCCTCTTTGTTCTGACACCCCAAAGTATGAACTAGTTCAATGGTTCTCTTCCTGAATCTACTATATTTGAAATGCTATCCAGCAGTTCCCTGAATAAAAATAATATAAATAAGTATGATATTTATAATAGTAGAAAGAGAAAATAATCTTCAAATTGATTCTTCAGGCACACAGATAGTTTGAAGTACAAGTAATTATGTCCTCTCTCTCAAAAGAAGTAATGTTGTCCTGTAAATGAACAGTTTGAATGATAGGTCACATAAAAGGATATATCTGGGCAACATGCGAAAGAAATGTGAAAATACAATTCAGATGACAATAAATTTCAGGTGATATTGCACATATAGCAATAGTACATAAACATCAACGATTTGATACTTAACTCATTATATCATGAACCATTGAGTTATCACTTTTTCTATTGTTAAACAATATATTTTCCTTGCATGCCCACGTGACATTGATCACCAAATACGTTTAACAAATTTATTTCTTTAACTTGTGTGTTGTAGGAAGCACTGAAGAATACTGGGGTAGACAGGATGCTGCTGACGCAGTCGCTCTGGTTAGTTTTCCCGTTTGTGTTCCATTTCAGCATCTGGGCGTGGACAATGTAGATGTTTGTATGGTCTACCATGATTTTCATGTTCTTTTTCCTTAGATATCTGGAATTGGTTCCAACTTTATGGTGATATTATTGTTCATTTTGCATCTTTGTGATGCTAAGGAAAGGACATGCATTTCTGATCCTTAGTGTCCTCTGTGATTTTGAGTTCGTGAACACATTGTATTTATGGTGAAAAACACAATGGAACTCAGTCTTATAATACTTGCAGCTGCTATGGAAAGGACTTGGTCTTGGAGAAGAAGAATCTGTTGGAAATTGGCATGGGTATGTTTGCATCCCCTCTCTTGCTCTCCCTCTCTATTTTCGTGTGCTTTACTATGAAAACTATCAGGTGGAGTTTACCCAGTACAACCCCCCCATACATCAAACATCTTTAGAAACTGTTGTCCTGAGTGGCAAATAGACCGTGTTTGTACCAATAGGTGTGTCTCTCGAGCACTTAGCTCTTATTTGCTATAGAAGACAAGCAATTGTTCTTTTTCTTTCATTCTTTTCATGCCATTGATCTCAGATATAGACATCTAGTCCAATGTCGATTTCCATACTAGTCCAATGGAAAGTAAGCATAATTTTAGTACATGCGAAGAACTCTCGTTATATTTTCCAATAATTAGCATATTTGATAATCCACCACAACTGATATTATTCCCTGGAAGGTAGGAGACCAATGTATCACCGTTTAATGCTAAAAGAACTAATTTTTGGCACTTTTTTGATAGTATAATGCACACACCGAACGCTTTGAGATTGTTTCTGTTAGAATCGAAATCAGCTCTCTGTTGAGAACTATACATAAAATCACTCGCCCAAGCATGCTCCCAGCATGGGTACTCTTGACTATCTTGCTTGTATATGTTTTTTTAAGTGAACTGTTTATCTATTATAATGATGGTTTTTGCTATGAATTTGAGCTGCATTAAGTCTGCTATATTTTCATGTAATGCAGGAATGGTGAAAAAGTCCTTCTAGGCATAGGAGGTGGTCATTATGCTCCTCGTCATATGGATATTGTAACGTAAGCGCAATTTTCTTTCATTGATTATGACACAACTTTCTTAGCAGGATCTAAGAGCATTGATTTAAGGGAGTATATTTCTTCAATTTTTGAAAGCATTTTCGTCAATGTTATATCTTGAAAATGTTTCAGGAAAGATGGTGTATGGGTGGGCCACTTGCTCTCTGGGTATTCTTTGCCAATGGAGGAACCGAAGCAGATGAATGGTAAAAATGTGGCTGACGTTGGCGGTATGTGGAAGCATTCCATTAAAGTTTCATATGAAGCAACAAAAGCGGCTTTCCCAGGAGGAGAGATTATTGCACATATTGATCAAAAGTAAGATGGCTTAATCTATAGCTAACTTGTGTTCCATTAGAATGCACTATCTTTTAATGAACATTATTCTATTTCATGTTTTGGGTACACATTATTTAAAAATTGGCCATCCTGATTCATCAGTAAAGATTACAAAACAACCATTTCAAATTTTGCCTTGACGGTACACATATCTAATTGTATCCAGCAATCTAGAAAATCATCAAATGCATCAGTTGGGGGCATTCTTATCACTGGAATTTTATAAATTGACATTTCAGTAAAAAGGGGCTTCCTTCTAAGGGTATGGACTTCTTCAATTGTCTGACTGTTCTGTTATGTTCCATCTGTCTGCTTCTCTGATTAAAACATTTGAATTCTAATAATCATATCTGCTGATAGTATGCATTCTTTTGAGAAATTTGGCAGAATTTTTTCATTTCATTTTTATTTTGCACGTTGCTAAATAAAATCTTGTTTAGCTGCAGAGCACACATGCATAGTGTTTATCATAGTAGGTTCAACTAAAATATGCAGTGTATGGTTGCATCCAATCATTTCAAACGATGCATCATGCATTGATTTGAATTTTGGATAGAATATGAAAATTGTGGTTTGTACGATAGAAAACTTACATATAAATAATTGATACTGCTGCAAAAAAATCAATTAATCATAAGACAAGTCTATTTACGGATATTTAATTACATGCAAACAGTGTTCTAACACCACCAGATCAAGGAAGCTTGCAAGTAGTCCACTAATCCATATAGTTGGCCCTTTTACTTGGCTAACCTATTTATGTGACTGATTTGCAGTAACCTGAATTAGTGATAGAGAACTGCTCCTTTGTTTGGTTGTTCTAACCAAAATTTTGTTTCTATTTCAGGAGCTTCAAAGGATGGCAAAAGAACGCAATTACAAGTTACTTGCAGGAGTTGAACATCAGGGTAGGAAAACCAAATGATTTCTTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028486