BGIOSGA028492

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Revision as of 07:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028492| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028492, complete gene.| tag = OJ1790_...")
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Gene Name

BGIOSGA028492

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028492, complete gene.

LocusTag

OJ1790_D02.16

Ensembl Transcript ID

BGIOSGA028492-TA

Ensembl Protein ID

BGIOSGA028492-PA

Length

4867

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16482301..16487167

Sequence Coding Region

16482301..16482599,16482758..16482857,16483127..16483393,16483516..16483593,16483667..16483768
,16483855..16483904,16484003..16484102,16484507..16484605,16484752..16484865
,16484967..16485141,16485455..16485861,16486294..16486368,16487141..16487167

Genome Context

<gbrowseImage1> name=IndicaChromosome08:16482301..16487167 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:16482301..16487167 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGCCTGTTCTCGTTTGACGAGAGGAAAGATCGAAGGTCAGATGTGGAGAACTCGGAGGACGAGCGGAGAAGGCTATCCATTGGGTCACTCAAGAAGAAGGCACTGAATGCATCAAACAAGCTAACACATTCACTCAAGAAGAGGGGGAAGAGAAAGGTGGAGAATCGGCCCTCATTCACAATCGAAGATGTCAGGGATGAAGAAGAGGAGCGTGCTGTCTTTTCCTTCCAGCAGGAGCTTTTTAGCAGGAACTTGCTGCCTGACAAGCATAACGATTACCACATGTTGCTGAGGTTTTTGAAGGCTAGGAAATTTGACACTGAGAAAGCCATTCAAATGTGGGCTGAGATGCTCCAGTGGAGGAAAGAATTCGGCGCAGACACAATACTAGAGGACTTCAATTTTGAAGAGCTAGACGAGGTCCTTGTCTATTATCCTCAGGGTTACCATGGAGTTGACAGGCAGGGAAGACCGGTATACATAGAGAGACTAGGAAAAGTTGAACCAAATAAACTGATGCACATTACTACAGTTGACCGCTATATGAAGTATCATGTACAAGAGTTTGAGAGAGCATTCCATGAAAAGTTTCCAGCATGCTCTATTGCAGCGAAAAGGCATATTGATTCTACTACGACCATACTTGATGTCGATGGTGTGGGTCTCAAGAACTTCAGCAAAACAGCCAGGGACATGCTGGGTAGAATGCAGAAGATTGACAGTGACTATTATCCTGAGACACTGCATCAGATGTTTGTTGTGAATGCTGGTAATGGTTTCAAACTACTCTGGAATACAGTGAAAGGCTTCCTTGATCCCAAAACTGCATCAAAGATACATGTTTTGGGAACAAAATTTCATGGAAAACTCCTTGAAGTGATAGATGCAAGCCAACTTCCTGAATTTTTGGGTGGAGCATGCACTTGTGCTGCTGAGGGAGGATGCCTCAAGTCTAACAAAGGCCCATGGAATGATCCTAACATTATGAAGCTTGCACATAATAAGGAGGCAAAATTTACTAGACATACTCGGCGCTTGTCTGAGATTGAGCAACGAAGGGGTTCATTTGCTAGGCTACATCTTTTGAAGGGTAGAAGCAGTGACACATCAACAGTGGAGTCGGGTTCAGATGTTGATGATCTCAGTTCTCCAATGATGAGAAGGCCAGTGGAATGTAGTCGATTAGCTCCAGTTCGTGAAGAAATGCAGATCAGAGCACGAGACTCTGCAGCTTACTACAGCTGCGATGATCACTTTGTTGTGGTAGACAAAACTGTTGACTATGGTAGAGGAGGAGCGATGCCTGATAAAACTAGTGCCCCAGAAGTAAGAGCTCAAGCTCGGCCTTTTGGAGGTAGCACAACATCATATGCGACGGGTTCCTCAAGCAACAGAGGTGGTATTTCCTCGAGCAACAGAAGCCGAACAGTCGTACCTAAAGAGAACATGGATGAAGGATTTTTCCGCCGTTTCTTCAGATTACTGCTGGCCTTGATTATAAAAGTTTTTGCCTTCTTCCACATAGCATATGGTCAGCAGGAGATGCGGGTTGACAATCCATTGCCTCCAGCTGAGCCTGAACCAACTTCTGATGATCATCCAGCAGTGGAGACTTTCAGTGTAGACCGCATCAGTCCTGTCATCGAGCGGCTTCAGAGGCTCGAGGGTAAGGTCGATGAGCTTGGCAACAAGCCACCAGAGATTCCCTTGGAGAAAGAGCGCTCCCTCTTGGAATCTTGGGATAGGATAAAATGTATCGAATCTGATCTCGAACGCACAAAGAAGGTGCTGCAAGCTACCGTGATGAAGCAACTGGAAATTGCAGAATCAATAGAGGAAGTGATTAGGAGGCAGCTAAGGTTGCCAGTTGCCACCAGTCTTCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MEGLFSFDERKDRRSDVENSEDERRRLSIGSLKKKALNASNKLTHSLKKRGKRKVENRPSFTIEDVRDEEEERAVFSFQQELFSRNLLPDKHNDYHMLLRFLKARKFDTEKAIQMWAEMLQWRKEFGADTILEDFNFEELDEVLVYYPQGYHGVDRQGRPVYIERLGKVEPNKLMHITTVDRYMKYHVQEFERAFHEKFPACSIAAKRHIDSTTTILDVDGVGLKNFSKTARDMLGRMQKIDSDYYPETLHQMFVVNAGNGFKLLWNTVKGFLDPKTASKIHVLGTKFHGKLLEVIDASQLPEFLGGACTCAAEGGCLKSNKGPWNDPNIMKLAHNKEAKFTRHTRRLSEIEQRRGSFARLHLLKGRSSDTSTVESGSDVDDLSSPMMRRPVECSRLAPVREEMQIRARDSAAYYSCDDHFVVVDKTVDYGRGGAMPDKTSAPEVRAQARPFGGSTTSYATGSSSNRGGISSSNRSRTVVPKENMDEGFFRRFFRLLLALIIKVFAFFHIAYGQQEMRVDNPLPPAEPEPTSDDHPAVETFSVDRISPVIERLQRLEGKVDELGNKPPEIPLEKERSLLESWDRIKCIESDLERTKKVLQATVMKQLEIAESIEEVIRRQLRLPVATSLL</aaseq>

Gene Sequence

<dnaseqindica>1..299#458..557#827..1093#1216..1293#1367..1468#1555..1604#1703..1802#2207..2305#2452..2565#2667..2841#3155..3561#3994..4068#4841..4867#ATGGAGGGCCTGTTCTCGTTTGACGAGAGGAAAGATCGAAGGTCAGATGTGGAGAACTCGGAGGACGAGCGGAGAAGGCTATCCATTGGGTCACTCAAGAAGAAGGCACTGAATGCATCAAACAAGCTAACACATTCACTCAAGAAGAGGGGGAAGAGAAAGGTGGAGAATCGGCCCTCATTCACAATCGAAGATGTCAGGGATGAAGAAGAGGAGCGTGCTGTCTTTTCCTTCCAGCAGGAGCTTTTTAGCAGGAACTTGCTGCCTGACAAGCATAACGATTACCACATGTTGCTGAGGTTGGTGTTGGAACAATGCTGAAAGATTGAGAGCTACTGAAGCATGCAGTTGTTTCTTTCTTTCTTTCTTCCTTTCTTTTTTTCTTTTGTGCTGAAGCTCTTTCTAGTTTTATTTGCAATATGTGTCTAAAAGTTGTATGCCTTCATTATCTCTATAGGTTTTTGAAGGCTAGGAAATTTGACACTGAGAAAGCCATTCAAATGTGGGCTGAGATGCTCCAGTGGAGGAAAGAATTCGGCGCAGACACAATACTAGAGGTGAGGCTAAACGGCTAATGCTGCTATTAATTGATACATAAAAATTGAAAATTTAACTTCGCCAGATACTTCCTGAAGGATATTCAAATATGTTGGTCCATGTACACATTGTTTTGTTTACATAAATAGGAGATTCCATCTGGCATCTTAAACTAGGAGTGCTTTAAGGTATAGACTATAGAGTGATGAGTAGTAGTACGTATTTTATCCCCAAGCTCAAATCGGTTTATTTTGAAAGGATAACTGATGTCTACAAATAAATATTGCAGGACTTCAATTTTGAAGAGCTAGACGAGGTCCTTGTCTATTATCCTCAGGGTTACCATGGAGTTGACAGGCAGGGAAGACCGGTATACATAGAGAGACTAGGAAAAGTTGAACCAAATAAACTGATGCACATTACTACAGTTGACCGCTATATGAAGTATCATGTACAAGAGTTTGAGAGAGCATTCCATGAAAAGTTTCCAGCATGCTCTATTGCAGCGAAAAGGCATATTGATTCTACTACGACCATACTTGATGTCGATGGTGTGGTATGCTGATTCTTCTCATATCTGAAATCACATTTGTTTGTGCTGCAAATTCTCACGAATTATTTTATTACAAACTGTAATCCTAATAATGTTCCTACTATTCATTGCCAATTCTGTTGCAGGGTCTCAAGAACTTCAGCAAAACAGCCAGGGACATGCTGGGTAGAATGCAGAAGATTGACAGTGACTATTATCCTGAGGTATGCTACTTTTGTTAATTTCCTTGATCAATCCAAGGACTAAGTTTGGTTAACACTTTACCTGTATACTCAGACACTGCATCAGATGTTTGTTGTGAATGCTGGTAATGGTTTCAAACTACTCTGGAATACAGTGAAAGGCTTCCTTGATCCCAAAACTGCATCAAAGATACATGTGAGTATGAATCCTCCCTGGAGATATTCCTTTTCCTGCTCTTGTCCAAATAAATATACTATATTTTAATGGAGCTTCGTTTATAGGTTTTGGGAACAAAATTTCATGGAAAACTCCTTGAAGTGATAGATGCAAGGTAAGCTTTCCATTCAGAAACATTTTATATGGTTTCTTGATCATAATGATTTTGTCGTCATGTCTTTGATTTAATGCACATTGTTTTGCTATTTACAGCCAACTTCCTGAATTTTTGGGTGGAGCATGCACTTGTGCTGCTGAGGGAGGATGCCTCAAGTCTAACAAAGGCCCATGGAATGATCCTAACATTATGAAGGTAATTTTTGTTGATTTATTTCCTAAAAATATATGTGCTTCTTCTTAGTAAGGTTTAATAGTGGTTCAAAATTTGGATTATTTTTGTTGCTTTTGAATTGTGACAAGTGACAATATGATAATGCCTAGTTGATTTAGATTACTTAACTTACTACATAAAAACCCCAATATCTTTGTTCTCGGCATGCTTAAATTATAAATAGAACATGTTATATAATCAATCATTCAGGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGAAGAAAGCACACAGATCTCCTTATCTAGTTCAAACAATATTTTCAAAAGAATATTTTTTTTCCATACATGTTATACTGAAGTTTATAGCAGCATCCTCAACCGTGGTAATTTTGGTGGTTGCTTGCAGCTTGCACATAATAAGGAGGCAAAATTTACTAGACATACTCGGCGCTTGTCTGAGATTGAGCAACGAAGGGGTTCATTTGCTAGGCTACATCTTTTGAAGGTAAAGTCCACTTTTTATGTCTGAAGTCTGAACAACTTATATTGTTATGTTGAATATTCTAAAACATGAATGAAGGCATTGTGCTCTCCCATGAACCAGTTCACATTGACAATTAATAGCGTTTTTTTTTCATGTACTCATGACAGGGTAGAAGCAGTGACACATCAACAGTGGAGTCGGGTTCAGATGTTGATGATCTCAGTTCTCCAATGATGAGAAGGCCAGTGGAATGTAGTCGATTAGCTCCAGTTCGTGAAGAAGTAAGCTTTTCCCTTATTCAGTTGTAGCATGAACTTGTTTATTCATGTGCCCATGCAAATTATTTTCTTAGTGTTTACGAAATCTCTTATATTCTACACAGATGCAGATCAGAGCACGAGACTCTGCAGCTTACTACAGCTGCGATGATCACTTTGTTGTGGTAGACAAAACTGTTGACTATGGTAGAGGAGGAGCGATGCCTGATAAAACTAGTGCCCCAGAAGTAAGAGCTCAAGCTCGGCCTTTTGGAGGTAGCACAACATCATATGCGACGGGTATGTTTATTTATAGTCTTCATATGTCATTTTATGTAATTCAGCAAATCTGTATTTTTTTTATTCTCCCCTTACAAGATTCTATTCACCTTTGTAATTCTTATGGATAAGCTTTCCCTTGTGAATATTACGTCTGTGTTAAGCAAGGACAGCATTATACTTATCCCTATGCATTAATGTTTCTTGAAACATCCCTATGCATTAATGAAAGAACAAGCTATTGAACTTACTATTCTTAGACCTTAGTTCTTCCTTAGAACCATTCTTAACTATTTGCTTCGAGTAGTCTGTTCAGTGTTTTTTGTTTGTATAGGTTCCTCAAGCAACAGAGGTGGTATTTCCTCGAGCAACAGAAGCCGAACAGTCGTACCTAAAGAGAACATGGATGAAGGATTTTTCCGCCGTTTCTTCAGATTACTGCTGGCCTTGATTATAAAAGTTTTTGCCTTCTTCCACATAGCATATGGTCAGCAGGAGATGCGGGTTGACAATCCATTGCCTCCAGCTGAGCCTGAACCAACTTCTGATGATCATCCAGCAGTGGAGACTTTCAGTGTAGACCGCATCAGTCCTGTCATCGAGCGGCTTCAGAGGCTCGAGGGTAAGGTCGATGAGCTTGGCAACAAGCCACCAGAGATTCCCTTGGAGAAAGAGCGCTCCCTCTTGGAATCTTGGGATAGGATAAAATGTATCGAATCTGATCTCGAACGCACAAAGAAGGTAAGATGATCACATTATTTTCTGTCTGAGTCTTATCTCTATTTTCAAAATCCAGAAACTATTTCATAGTATATGAATATGAATAACTCTTTATCGTGCCTAAATATTTACTGTCAATAGCATAGAATTTAGATTATTAAACTCAGTACCAAACTACAAACTGAATACTATTATTTTAAGTGTTTCAAAAGAGGCAAGCCCACTGGTAAGATAGAAAGAAAATATATGCACGGCACCTTGAATTTTATCTCTTTTTACAAAAATCAAGGTAGGTCAGAATCTTCTTATAGTCTTCTATATTACGGTGCTTGTGAAAATTGTCATAGCCTCCTGATAAAAAAAAAATGTCATAACCTTCTACCGAACTACCATTTAAATCTTGAGGCCCATCTCAAGTGTAAATATGAAACCTTTCCTCCTTACATTTTTCAGGTGCTGCAAGCTACCGTGATGAAGCAACTGGAAATTGCAGAATCAATAGAGGAAGTGATTAGGAGGCAGCTAAGGGTAAAATTGGTCGCTCCTTCTGTTTCATCTTCTAACATGGATTGGCGTATCATATGCATATTCCATCTCACTGTTTTCCTGCATTGACTCTCCTTACACAGAGACGAAGATTTTGTGCGTAATAAAGAGACCTAACTCCAGAATTAACAACACATGTCATTGAGAAATAAGACTCAGGAGTACATTTGGCGGCAAAATTATGCATAGGACATGGTTGATGAGTGCAGACACTTGGATTCGGTGTTTGGATTGGCTCAAAGAATGGGTGGCAGGAGCCCAGAAACAGCAAAATATCAGCTCCCCTTCTGAATCTAAGAGGCTTGTCTATCCTTGATGTTAGCATAGGATGTTAGGATGGATGGCAAAAAGAAATGTAGAATAGGTAAAAATGGGAATGGATGTGAAACATATGTCATTGTCTGCATCTAGAAACATAAGCATCGAGTTCTCTTTGCCAAACAAATTTTCTTTATGTGATCCTGTGGTATGGCAAAATTGTAAGGGAAATTGTAAGAATTATGGAAAGTGCCTTGCATCAGGAATTGAGAGGCAAAGAGAAATGTAATCATCAAAATGATTACATTGTGAAAGTTGTGTCTTCTGCTCTAGCAAAGGGATTTTGTCAGAACTGAGTGATCACTACTAATTGTTTCTAATTAACCTGAAATTTCACTGCGCAATGGAAGTTTTTTTTTCTTTTCGCTGGGCTGCGCAATGGAAGTTGAGATCAATTCATCAGTAGATATGATAGTTGGACTTGTTTGATGTTCAGTTGCCAGTTGCCACCAGTCTTCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028492

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028492&oldid=34749"