BGIOSGA028495

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Revision as of 07:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028495| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028495, complete gene.| tag = OJ1119_...")
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Gene Name

BGIOSGA028495

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028495, complete gene.

LocusTag

OJ1119_B10.8

Ensembl Transcript ID

BGIOSGA028495-TA

Ensembl Protein ID

BGIOSGA028495-PA

Length

6911

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16578519..16585429

Sequence Coding Region

16578519..16578544,16578686..16578808,16579613..16579733,16579908..16580036,16581265..16581374
,16581450..16581633,16582466..16582657,16583501..16583722,16583812..16583998
,16585335..16585429

Genome Context

<gbrowseImage1> name=IndicaChromosome08:16578519..16585429 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:16578519..16585429 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCCATGGAGCCGTTCAACCGGCTGGTGAGGCTGGCGGCGCGCGCCTTCTACGACGACATCTCGATGAAGGGCGACAACCAGCCCAAGACCTCCCGCGGGGACAACCGGGGGATGGCTGTCGTCGTCCTCGACGCGCTCACCAGACGCCAATGGGTTCGAGAGGAGGATTTGGCTAAGGCATTGAAACTCCACTCAAAGCAATTGCGCCGTATCCTCCGATTCTTTGAAGAAGAGAAACTAGTGACACGAGATCACCGGAAGGAGTCAGCAAAAGGAGCAAAAATATACAGTGCAGCAGCTGCAGCTGCTGGTGATGGTCAATCAATTACCAAGGAGGGAGAAGAGAAAGTAAAGATGCATACCCACTCGTACTGTTGCTTGGACTATGCACAGATCTGTGATGTTGTAAGGTATCGGATACATCGCATGAAGAAAAAGTTGAAAGATGAATTGGACAGCAGAAATACAATCCAACACTATATATGCCCTAACTGTAAGAAAAGGTATTCAGCCTTCGATGCATTACAGCTTATAAGCTACACCGATGAGTACTTCCATTGCGAAAATTGCAATGGTGAGCTAGTTGCAGAGAGTGACAAGCTTGCTTCTGAGGAAATGGGAGATGGTGATGATAATGCAAGAAAACGCCGGCGTGAGAAACTAAAGGATATGCAGCAAAGGATCGATGAACAATTGAAGCCATTGCAAGCACAACTTAATAGGGTGAAGGATCTTCCTGCTCCTGAGTTTGGGAGCTTACAATCATGGGAAAGAGCTAACATTGGTGCTTTTGGAACTGCTGACCCTAGTGCTGCTGACTCGTCTAGGAACCCACAAGGGCAGTATGGTACACCAATGCCATACCTCGGAGAGACAAAGGTTGAAGTTGCATTGTCTGGCACCGGTGTAAAAGATGAAGGTGCTGAATCAGGTACAAATGGTAACGGGCTGAAAGTCTTGCCTCCATGGATGATCAAACAAGGTATGAATCTTACAAAAGAACAAAGAGGAGAGACCAGTAACTCATCAAATCTAGATGAAAAATCAGAAGTTAAGGATGAGAAAAAACAGGACTCAAAAGAAGATGAGAAGAGTATACAGGATGAATACATAAAGGCTTATTATGAGGCCTTAAGGAAAAGACAGGACGAAGAAGAAGCGAAAAGGAAGATACAGCAGGAAGGGGATACATTTGCTTCTGCGTCTCATTCTGAACGGCAGGTGGGCATGAAATCCAAACGAGAGGATGATGATGAGGGTGTTGAATGGGAAGAAGAGCAACCTGCAGGGAATACAGCTGAGACATACAAACTGGCAGATTTGAATGTTGAAGCCCAAGAATCTGGTGATGAAGAAGATGAAATTGACTGGGAAGAGGGTTAA</cdnaseq>

Protein Sequence

<aaseq>MGSMEPFNRLVRLAARAFYDDISMKGDNQPKTSRGDNRGMAVVVLDALTRRQWVREEDLAKALKLHSKQLRRILRFFEEEKLVTRDHRKESAKGAKIYSAAAAAAGDGQSITKEGEEKVKMHTHSYCCLDYAQICDVVRYRIHRMKKKLKDELDSRNTIQHYICPNCKKRYSAFDALQLISYTDEYFHCENCNGELVAESDKLASEEMGDGDDNARKRRREKLKDMQQRIDEQLKPLQAQLNRVKDLPAPEFGSLQSWERANIGAFGTADPSAADSSRNPQGQYGTPMPYLGETKVEVALSGTGVKDEGAESGTNGNGLKVLPPWMIKQGMNLTKEQRGETSNSSNLDEKSEVKDEKKQDSKEDEKSIQDEYIKAYYEALRKRQDEEEAKRKIQQEGDTFASASHSERQVGMKSKREDDDEGVEWEEEQPAGNTAETYKLADLNVEAQESGDEEDEIDWEEG</aaseq>

Gene Sequence

<dnaseqindica>1..26#168..290#1095..1215#1390..1518#2747..2856#2932..3115#3948..4139#4983..5204#5294..5480#6817..6911#ATGGGCTCCATGGAGCCGTTCAACCGGTGAGTACCCCCTCCGTTTCGCACGGGCCCTGGAAACTCTAACCCTAGCGGGTGGGGGGTGATGAGATGTGCCCCCACCCTCGCCTGCTTTTCGTCGCTGACCTCGGCCGATCGTGCCCGCTGATGATGATGATGATGCAGGCTGGTGAGGCTGGCGGCGCGCGCCTTCTACGACGACATCTCGATGAAGGGCGACAACCAGCCCAAGACCTCCCGCGGGGACAACCGGGGGATGGCTGTCGTCGTCCTCGACGCGCTCACCAGGTGATTGGGTCTGCTTCCTGAAGATTCTGTGGGGGGAGAATTTCTGTGTTCGCGAATTCGTATACCTAGGTCTGGGTTGAAGGCGGGGGTTTTCCTCTGTTGGTAGGATCGTGAGGGGCGAGTGGAGTTAGTAGAACACAGTTCATTTGGGTCCATCCGGAAATGAATTGATAAATTGGATACTTCTAATGAGCACACTTAGATGATATTGTTGCTGCTGCTTAGGGACATCTCGATGGGTGATGTTATCCTCGATGGATGAAAATGGTGGAGGTGTTTGCATGAACCAGAATTCCCCCAATTGGACTGTTGTAGTTAAATTTAACAGTGATGTGCCACAGCAATTTTATTTGAGTTTTGACTCTTTCTTCCTTTGACTGGTTTTATATGTTTTTTTTAAAAAATTGGAGGTTAAAGATGATAACAATTGTTAAGGAATTCTGTACTCAGGAACTGCAAATTTACTAATGGATCAAGGATAAAATCCTAGATGTCCTCTTTTCTTGGTTGTTAAGACATGTAGATTGGAGCCAACGAATGAAATGTCTAAATCCTTATAAAACATTCTTTCTTAAGAAGTTTTTATCCACAAATCTCTGGACCTCAGCACTTCAGCTACATCATGTTTGATGGATTGTTAATTTTATTTATTAGTCCTCATGTTTTCCATCCACTTATTTGTGCCTTCTTTTCCATACACATTGATACTATCAACTGATGCCTTTTATGCAAATTACATTGTCTTGGTATAAAATGGTTTTTGGCTCTGAAGTTATGCAAAAGCTAATATTTTTCCACCACCAGACGCCAATGGGTTCGAGAGGAGGATTTGGCTAAGGCATTGAAACTCCACTCAAAGCAATTGCGCCGTATCCTCCGATTCTTTGAAGAAGAGAAACTAGTGACACGAGATCACCGGAAGGAGGTTAGTTTTTTATTGCAGCTATTATTATTGAAGTTCCACTATATCTCCATTGTCTTTTTCGTTTTATAGGGATGGACATGTTTTAACTGACATCTCCTGCGACCCAATGAAAAATATTTTTGTTGTGGTTCATTTTCCTTTTCTAATTTTAATTTTTTTACTTTGTTGCTGCAGTCAGCAAAAGGAGCAAAAATATACAGTGCAGCAGCTGCAGCTGCTGGTGATGGTCAATCAATTACCAAGGAGGGAGAAGAGAAAGTAAAGATGCATACCCACTCGTACTGTTGCTTGGACTATGCACAGGTAGTTATCCACTGGTTTTATCTAGATGTTTTTCATGATAAATACCATTCAGATTGAAGGCATTCCCTCCACAATATAGGGCTAGTAAATTGTTCTTTTCCTTTTCTAGAATGTTCTAATAAGGACGAGTTTAGTGTAGATGCCAGGGAGTGGGATACTGTTATTTCAGGATACCCATGCAAAGTGTTGAAAAGTTAGTGTGGTTTAGCATATTTTACCTATGGGGGTTGAATACTGTTTAATGTTCAATCACTTATTCCGAGTCAAGGTGTGTGAACATCGTGGATAATAAATTTTCTTTAGATTTTTTACATTTAGATATTGCTTGTATGTACTAGAAAATCAATGTTTCATCATCAGGGTTCATATGCAAATACAGTTTCTTCGTGTGTAATCTGGCTGTAGTAACTCCTATAAATGTCATTCTCTCATAATCATAGATTCATTTATTCGAATTTTTGGTGTAGTTGCTACAATTTGAATCCACGCCATTAGGAACCTAATAAGTTGCATAATACTCCCTCTGTTCCATCTTGTAAGGTGTTTTAGTTTTCTCCTAAGTCAAACTTCTCTAACTAACATTTATAATACCAAATAAACACTATCAAGGCATATTTTATGGTGGATGTAGTGAAACTAATATGATGTTGTAGATGGTAGTGCGTTTTTCTATAAACTTGGTCAAAGCTAGAGAAGTTTGACTTAGGACAAAACGGCAATATGGAATAGACAATGGAGTACTCTAAGAAACAGTACAATTGTAGATAACCAGGCCTACTTGGTTCATGTGGTGATTATATTCATTTCTACTTGTTTCTAGAGACACAAAACCAAACATAAGAAACATGTGCTAACAAAAACTATTTTTGTGGATTGTTTAGATCAATTGTGCATCATAAATTTCGGTTGAATGGCAATTTATGAACTAGTTTGTATAAACAATATAACATAACATACAAGTTAACCTTGTCATACATATCCATTAAATTGACTTTACCACACTTTTTTGTGCATGCTGCTAATGGCATTTACAATATTACTACGTTTGTAGTTTTTGTTTACTTCTATGTTGCAAGTATTTGAGTTATTTTATTGTTTGAAGTAATGAAGGTCTTTGATCTGTTGAGGACTACAACTACAAAACCTAATCATTCTCATTCATCTTTCATCTTATTCTGTCATCATATTTGAATCGTGTTTGATAAGATGCATTTTTTTTGAAACACAGATCTGTGATGTTGTAAGGTATCGGATACATCGCATGAAGAAAAAGTTGAAAGATGAATTGGACAGCAGAAATACAATCCAACACTATATATGCCCTAACTGTAAGAAAAGGTACTAGGTACAATTATAGTTCTTTTGATGCTAGGCACAAAATCAAGTTACTTAACCTTGTCTTACAATATGCAGGTATTCAGCCTTCGATGCATTACAGCTTATAAGCTACACCGATGAGTACTTCCATTGCGAAAATTGCAATGGTGAGCTAGTTGCAGAGAGTGACAAGCTTGCTTCTGAGGAAATGGGAGATGGTGATGATAATGCAAGAAAACGCCGGCGTGAGAAACTAAAGGATATGCAGCAAAGGATCGATGTAATTATATTTTTATTTTACAATGCTAAGAACATTTTCTTGTGAGCATTCAATTTTAAGCACTTTTAATGCAACTTATATATATAATGGTTCAACTAGTGCAGAATAAGACAAAATGTTTTTGATTTACAATCTGCAATCATACTGTTGGTTAGGCCATGATTCCATGCTTTTTTTTTGGCACAACAGGAAATATAGTAAGTTATCTGCTTGTGGTCTTTCTGGATGCTGTTGAAATTATTCTTTTTGTTTCTTCATTACGAGTTTTTGCTTGGAGAAAATTACTTGCATGCATTAGTATGCTAGATGCTCATCAGACATGAATAGGTGACCATGTTAGTAACACTTATATGTACATCCCATTATGGGACAGTTTACATCGTGAGTTCTACTTCAGAGTTGTTAATGCTTTGCTATAAACTACAGAAATTAAATATACATTAGTTTCAACTTTAACAGATACCATGATATATTTCCACAGTACCATCTAAACACTGTTGCTTCACTGGTTTGCTTATACAACTTATGATTGTAGATGTGTCTACAATCTGCTTAAAGTTCAATATAAAAATCTCTTGCTGTTTCAGTCTATTCAACAAATACTTTAATGCGGTAGACAACCAGTTCTTTTGGATGAGAAATTTAGTATTGTGATCTTTTGGATTAAAACGATGTGCCCTTTTTTTAGTGAAGAGTCTTTTCTTTTTTGCTGATAATGAGTAGTAGTCTGTCAATATTTTTGTACTAATTTGGAAATTTATGTTTGTTAGTCTTGATCTACTGGAGTTTGGTGTTATTTATTTTTTTTACAACTTCGTTATATTTGGTTCAGGAACAATTGAAGCCATTGCAAGCACAACTTAATAGGGTGAAGGATCTTCCTGCTCCTGAGTTTGGGAGCTTACAATCATGGGAAAGAGCTAACATTGGTGCTTTTGGAACTGCTGACCCTAGTGCTGCTGACTCGTCTAGGAACCCACAAGGGCAGTATGGTACACCAATGCCATACCTCGGAGAGACAAAGGTAAGATTATTTTTATAATAGTAGTTTTTAGTATTGTTTGATTTTTTATTAGTACGCAATCAACAATGGCGCGTCTTGAAGCTTCCTGAGATTGTAGGTGGGTCCAACATGTCAGGTGATGGTGGATCTAACGGGCAAGACTAAGGGAACATATCCTATGCACACAAGTTTCCCGTGCACACATATCTACAAAGTCTCATATTCAAATTCATTATATTTTAGCCGTAACAAAAAAAGTGAAAAATCTGACAGTTTTAAGGGTAAAAATCTGTCAGAATTGTCTTTTTTATTACGGCTAAAATATAATGAATTTGAAGATAAAATTTCACATGTAGGTGTAATACTATTCGAAATATGTGTACAATTTTTTGTAGAATTTTTCGTGACATTTGCTAGTTCGTGTGCACTGAGTGTGCACGGAGTGTGCACGAGAAGCTTGTGTGCATAGGATATGTTCCCCAAGACTAAAACCTGTAGTTTTGTGATAACGGAAACACGAAATCTGTATTTTGTGAGACAAGTTCGTAAATCTGTAATTTTGTGATAGATTGTGCGAAGTACCTGTAGTTTAGTGAAATTTACTAAAAAGAACTCTGAATCAAATCTAACATAGTTTCTTCTCGAATTTTAGCAAGGATTGTTGTTTTCTTTAAGAAAAGTATTACTGATCTTCTGTAAAATAATGCGATGTGTTTATTTGTTAATCCTTACTAATGCATGTGTGTTTAATATGTGCTTACACATGAACGTCTCCTGTCTTGTATAGATGATACTCGGTACATTTTCATACATTTTCAATCATGCCTTGATCTAATCATGCTTTTTACTTATTTTTCTTTTCAGGTTGAAGTTGCATTGTCTGGCACCGGTGTAAAAGATGAAGGTGCTGAATCAGGTACAAATGGTAACGGGCTGAAAGTCTTGCCTCCATGGATGATCAAACAAGGTATGAATCTTACAAAAGAACAAAGAGGAGAGACCAGTAACTCATCAAATCTAGATGAAAAATCAGAAGTTAAGGATGAGAAAAAACAGGACTCAAAAGAAGATGAGAAGAGTATACAGGTCAGTTTGGGAATGAACATAAAATCTGATTTTACTTTGAAGATTTATTTTCTGTTCAGAGATACTTATGTTATTCTTTTATTGTGTAGGATGAATACATAAAGGCTTATTATGAGGCCTTAAGGAAAAGACAGGACGAAGAAGAAGCGAAAAGGAAGATACAGCAGGAAGGGGATACATTTGCTTCTGCGTCTCATTCTGAACGGCAGGTGGGCATGAAATCCAAACGAGAGGATGATGATGAGGGTGTTGAATGGGAAGAAGAGCAACCTGCAGGTAAATTTATGATTGTAATAACAGTAAATTGATCTTTTAGGCAATGTATCATATGCACACAGTCATCTTGGTGTACTCATGCACTCAATCCAGACCCTCCAATCTCTATCCAAAGGATAAGAATGAAGAGTGGTACTTTTTCACAAAACCGCCCACACCACCCTAGTAAGTTTGCATATAACCCCTAGTTTTATTCTCTCCTCTTCCGTCTATGTCCAGGTTCAGGCTTCTCCTTTCTATCTTTCTTTCTTCCCAAATCTGTCTTTGAAACGGTGAAACCTCCTCCTTCCTCTTCGCCCCTCTTAGTGCGGCACCGACGGCATCTCAAATACAGCCCACGCTCTTTGATCCTTCTGTTTCCCTTTGTCCATGTTCTTCTCGTTCTCGTCCTAACATTAAGTTAATCCTAATCCTACAAATTAATTTCTATCTCTCTCCCAGCAGTGGAATCAGTCGCGGCATTGCCATTGCCTCTTAGTTTGTAGCTAGCTATATATGGCACATACGAGAGAGGCCGATCAGATGACGGATGTTCGTTGATGCCACGGTGCCATTCTTCGACTAATACTTATAGTCTTCCATATAGCAAAAAGCAAGCCCGTGATTAGCAGCATTGTCTCCCTTTCTTTTGGGTTTGAGAGGTGATTGAAGCATCTTTCCTATTAATTGAATGCAACAGCTTTAGTTTGGCTTGGTCAAGCGTGTACTTGCTTAGAGGATTTGAATCGTTGTGGAAGCCACACGAAGCGGGAGGAGACAACGCAGATAGATCTGGGAAGAAGCTTTGGACCTGGACATGAAAAGAGAGAAAAGAACAAAGGGGTTATGTGCAAACTTACCAGAGTGGAGCGTGCGGTTTTGTGAAAAAACACCACTTTTCGTTCTTATCCTTAGGATTGAAATTGAAGGGTCCAGATTGAGTGAGTGCATGAGTTTACTAGGATGACTGTGCACATAGGATACGTTGCCTTGGATCTTAATTCTATGTTTATCAAAGCTGCAACATTGAACTGACTTAATATTTCTGACTATTCACTTATTCGCTGATATAATAGATTAATAGCCATATCATGACTCATCTTAGTAAGACTTGCCATAATTTCTTGCAATGTTGATGTGTTAACACAATTTTATATATGCATGTGTTGGGTGGGTGGGTTTGGGGCATCCTATCCATATGGCCTTTCATCTTGGCATATGCTTTTGGAATATTTCGATGGAAGTTCATACGTTACATATTTCTTATCCTTGATGTGTCTGCTTTTGATTATATGCTTTAGACATTTGAAGATGTCCTTTTATCAAGTATTATGTCTAATTTTTTGAACTAATGCAGGGAATACAGCTGAGACATACAAACTGGCAGATTTGAATGTTGAAGCCCAAGAATCTGGTGATGAAGAAGATGAAATTGACTGGGAAGAGGGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028495