BGIOSGA028500

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Revision as of 07:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028500| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028500, complete gene.| tag = P0410E1...")
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Gene Name

BGIOSGA028500

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028500, complete gene.

LocusTag

P0410E11.104

Ensembl Transcript ID

BGIOSGA028500-TA

Ensembl Protein ID

BGIOSGA028500-PA

Length

6455

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16665071..16671525

Sequence Coding Region

16665071..16665451,16666765..16666887,16666979..16667131,16667232..16667317,16668246..16668330
,16668471..16668590,16668715..16668783,16671228..16671357,16671449..16671525

Genome Context

<gbrowseImage1> name=IndicaChromosome08:16665071..16671525 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:16665071..16671525 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGAGCGCCGCGGCGGCGTTCGGCCTCGTCCGGCCGTGCCCCGCGCGGCCGCCGCTCCAGCTGGGCCCCGGCAGCAGTAGCTGTCGTCCCATCCTGCTCCATGCCCGGCCCCTCGCCGCCGGCATCGCCTCCTCTTCGCGAGGGCCCGCCGCCGTGGCGGCGCGGTCGCTTGGGCGGCTGCTGCTGCTGCCGCCGCCGCCGCCGATCTCGCCGAACCGGGCGGGGAGGGGGAGGGCGCGCCACGTGGCGTGCGGCGCGGCGGCCGGGGACGCCAAGGCGGAGGAGGAGGAAAGCGGCCTCGCCAAGACGCTGCAGCTCGGCGCGCTGTTCGGGCTGTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAGGTCCTGAAGGTTTTCCCATATCCAATAAACATTACAACAGTTCAATTTGCTGTTGGTACTGTCGTTGCTTTGTTCATGTGGATCACTGGTATCCTTAGGAGACCAAAGATTTCTGGTGCACAGCTCTTTGCCATCCTTCCTCTAGCTGTGGTCCATACTATGGGCAATCTTTTCACTAACATGAGCCTGGGGAAGGTTGCTGTGTCATTCACACATACCATCAAAGCTATGGAACCTTTCTTTTCTGTTCTCCTCTCTGCAATTTTCCTTGGCGAGTTGCCTACAGTTTGGGTGATACTTTCACTTCTTCCGATTGTTGGTGGTGTAGCATTGGCATCTCTTACTGAGGCTTCCTTCAACTGGGCTGGGTTTTGGAGTGCAATGGCTTCAAATGTCACCTTCCAGTCAAGGAATGTGCTGAGCAAGAAACTCATGGTTAAAAAGGAGGAATCTCTTGACAACATTAATCTTTTCTCAATCATAACTGTGATGTCATTTTTCCTTTTGGCCCCTGTTGCCTTCCTAACAGAAGGCATCAAAATCACTCCTACAGTTTTGCAATCTGCTGGTCTGAATGTAAAACAGGTGCTTACAAGGTCTTTACTTGCTGCATTTTGTTTCCACGCGTACCAACAGGTGTCCTACATGATCCTCGCGAGGGTGTCTCCTGTCACTCACTCCGTGGGCAACTGTGTTAAGCGTGTCGTGGTCATCGTAACATCGGTTTTGTTCTTCAGGACTCCTGTTTCTCCTATCAACTCCCTCGGCACTGCCATCGCACTTGCCGGAGTTTTCCTGTACTCACAACTGAAGAGACTGAAGCCCAAGCCCAAGGCTGCGTAA</cdnaseq>

Protein Sequence

<aaseq>MQSAAAAFGLVRPCPARPPLQLGPGSSSCRPILLHARPLAAGIASSSRGPAAVAARSLGRLLLLPPPPPISPNRAGRGRARHVACGAAAGDAKAEEEESGLAKTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITTVQFAVGTVVALFMWITGILRRPKISGAQLFAILPLAVVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAIFLGELPTVWVILSLLPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKEESLDNINLFSIITVMSFFLLAPVAFLTEGIKITPTVLQSAGLNVKQVLTRSLLAAFCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVTSVLFFRTPVSPINSLGTAIALAGVFLYSQLKRLKPKPKAA</aaseq>

Gene Sequence

<dnaseqindica>1..381#1695..1817#1909..2061#2162..2247#3176..3260#3401..3520#3645..3713#6158..6287#6379..6455#ATGCAGAGCGCCGCGGCGGCGTTCGGCCTCGTCCGGCCGTGCCCCGCGCGGCCGCCGCTCCAGCTGGGCCCCGGCAGCAGTAGCTGTCGTCCCATCCTGCTCCATGCCCGGCCCCTCGCCGCCGGCATCGCCTCCTCTTCGCGAGGGCCCGCCGCCGTGGCGGCGCGGTCGCTTGGGCGGCTGCTGCTGCTGCCGCCGCCGCCGCCGATCTCGCCGAACCGGGCGGGGAGGGGGAGGGCGCGCCACGTGGCGTGCGGCGCGGCGGCCGGGGACGCCAAGGCGGAGGAGGAGGAAAGCGGCCTCGCCAAGACGCTGCAGCTCGGCGCGCTGTTCGGGCTGTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAGCAGGTGAGCAAGTGAGCTTATGATCTGGCTCTTGAGTAATTGTGAATTAAAAATGCTGGAATGCTCTGTAATTGTGTAGATTCGGATCAGAGTTTATTTCACAGCATGAAACTCTTGCGTTTTGCATGGGTTATTTATTGTGTTCTGCCTGCGATCCTGCTGCTTGAAATGGGAAAATTGTAACTGCAGTATATCTGTCTCTATGTGAGGCTGCGATTCATTCTCGCTATCTTTCTTTTTAGAAAAGACAACTATCTTGTACTGGGTGATCACTGCTCAATAAGATGATTAATATGATATTTTTCGAGTGCAGGTTTTGGTTATCTTTTTGTGGGTTGAATTGATTGTGTTTATGCTAGTGGACATTTAGTTTGTCAATGTGTTGAAATACATTGTGATGTTGTTTTGCTCTTTTGGGCCTTCATTCTTGACTTTAGGCCAAAGGACCCAGGAAAAGTTATAGACTTATAGTTGATTTGTATTTGAGTACCTTTATTAAAGCTTTTGTGTGATGATGGCCCCTGCAAAGCTGCAACTAATTATGGTACGGTATGAATGGTCTGTCTGTTTTGGTGCAAGGTAGCGATAAGGATGTTCAATGTGCTATTTTAGATCTGAAATGAAATAAATTCCAATAATTTATGATTTACTTTTGTTGAGATCAAGTTTCTGTCGTCCCTGTAATTTCCTTGTTAATTGTTCTGCACTTCTGTTCTAATATACAGAAAATGACTTAGATTTGAAGTTCAATGTTATATGTTAGTCCATAAGGTTCTCGATGACATGAAATCTTGTATCCTATTTTCTTTCAAGTTTCTCAAGATGTTCTCAGATATCGATTTGAAGTTGTTTTTAAGAGTCAGAAGGTGGCATCTCTGTTTGGAACATAATATTTGCCTTTTGCAGTTTGAAACATGACGCAACGTTGCACATATGTTTTGATATGACATCAACTTTTTAGGTACTTTTATCCTGCGATAGTCTGGCCTTCTGACCATTTCATCATTGTAATACTTATTTATCTCCTTTGATTATACATTCATTCTTCTATCTTATTCTGCCTTGCAGTCAGTACCTCCAGTTACTAGAGATTATATAATCTTCCTACTAAACTTCCCTAGATGCATTTCTGTTCATCATGCAAATCTGACTTGGTATGCATGGGTTTTCTTGATTATCATCATACAGCCTTTCTTTTCTAAAAGCATTTTGTATTTTGATTGTGTTGTTCTTCCTGCAGGATATGCTATATTGTTATATTGATTATTTTCGCAGATAAACTATTAACTCTTGTTTTCTGTTATAATGTTTGACAGGTCCTGAAGGTTTTCCCATATCCAATAAACATTACAACAGTTCAATTTGCTGTTGGTACTGTCGTTGCTTTGTTCATGTGGATCACTGGTATCCTTAGGAGACCAAAGATTTCTGGTGCACAGGTAGATCTTTGATATTGTTTGACACACTTTCATTGTTTAAATGGGTTGTATTAACAAGGAGTATCTGTTGCTCTTGTGTTTTCCTTTTCAGCTCTTTGCCATCCTTCCTCTAGCTGTGGTCCATACTATGGGCAATCTTTTCACTAACATGAGCCTGGGGAAGGTTGCTGTGTCATTCACACATACCATCAAAGCTATGGAACCTTTCTTTTCTGTTCTCCTCTCTGCAATTTTCCTTGGCGAGGTAACTTGTAGTGTCCTATATAATGTTGATTGCTGCAATATATTATGTATATCTGAGAGAACTACCTGGGTTTTCTTTCAATAATTGAATGGCATGGCAGTTGCCTACAGTTTGGGTGATACTTTCACTTCTTCCGATTGTTGGTGGTGTAGCATTGGCATCTCTTACTGAGGCTTCCTTCAACTGGTATGTAACAAGTACTATCATTTGAATCCAAGCTTAATAAAATGAACTGTAAAGGAGCAATTATGCCAAACATTTTGGGCTTATGTGTTTCTCTGCTATTATGTCTCATTTCTCGCTCTTTTTTTTCTTGGCCAATCACATAGTGTACATTGACATAAGTAAGGTGTTTGATGTATTTGGCATATATATGTTTATGTTTTTAACACAATAATATTGTATCTATGTGACATTTGGATTATTGAATCTATGGCAAAAAGGTGAAGTTAGTAATTTACAACTGATAAAACATGGAATACATAGTTCACACATCTTTGGGTTATTACTTGCTAACTCTTCGCATGAGCTATTGCGTGTAATTTGAATAAATCAAATTCAAAGGGATTTAATGCATGATTCTTATAAACAAAAATATTCCATTCTTGTCATCTTTGCATGCCTTCCTTATCTCTTCAGACAGTTCATGTGAGCAGTTAGCAAGTTAGCACTCGCGAGCAGTCTTTACTCTGTAACAGATACATTTGCATTTTCCCAGTTGAACTTATCATAATTAGCTCATAGGAAGATTCTAGTTCCTGAAAAATGAACTATGTAAAGATCAAATCATCAAGTCACTGATACAATTCAGTCTTATTATTTTTTATTTTGATGTAGTGTAGTGCCTAATAGAACAGCGTTGTTTTGCAAACTGTTCTACTCAATCAGCATCAACCTACTTTGCACAGAATTAGAAAACCTCATTCTATGCAGAGCTGGCCAGGTCCAGATCTTTTACCAACCAAAATTGTTCGAAGAAATATGTCTCCTATATCATGTTTAATGTTATGTACTGTTCGTATATTGTCACCATATTTCAAATTTCGTATGAATGAGGGATATATAACCAACCTCCTGCTATAATATATTACTTTGCTGTAACCTGATACAACAGGGCTGGGTTTTGGAGTGCAATGGCTTCAAATGTCACCTTCCAGTCAAGGAATGTGCTGAGCAAGAAACTCATGGTTAAAAAGGAGGTAATTGTGAATATATAAATGTGTTACAAAATAATGTTATATATTGGATAGGTGGCTTTATGTGTGAACTATTTATTGTGTTGATTATCTTGCATTGCTGTACTACTTCCTAATCCACTTCATTATTCCTACTCAAGCAGGAATCTCTTGACAACATTAATCTTTTCTCAATCATAACTGTGATGTCATTTTTCCTTTTGGCCCCTGTTGCCTTCCTAACAGAAGGCATCAAAATCACTCCTACAGTTTTGCAATCTGCTGTGAGTAATACAGAACTCAATTCATTTCACTGGTTATTAGAAAATACAAAAACAAAAGAAGCACCTTTCTCACCTTTCATGATCGTAATGAAATTTCTGACTGATTTCCTGACACATGATGTAGGGTCTGAATGTAAAACAGGTGCTTACAAGGTCTTTACTTGCTGCATTTTGTTTCCACGCGTACCAACAGGTTAGTCATGCATGCTGTCGTTTTTTCATGTTTGGTCATATACATGTTTAGTTGGGATAGTTGATAGTTCTGTTTATGGTTCAAATGCCAGAAAGTGCATATTTTAAGTCTGTTGGAGTTAAAGTATTCTTCTTACAGCACTACATTCAAGTGATATGAATAACCAATCCCTTCTAGTTATTTCGTGGCTTAAGTTCATACTCCTATGGAAACTGAACGTCTAATACCTAATTTAGAACCCAGGAATTTCCTGCCAAAATTGATACTTCCGTGATAAATTTCTGCATTAGAAACAGTGCCTAAAGCTCTAAAGGAAAAACTGTGCAGATTTTGATCTGTACTTGTGGAGTCATGGGGTCGAAATACTCGCATGTTCTAGATAATTTGTTTTTGCAGATTTTCTGCACAAAACTAATGCATATTTGCAAGATTGTTGAAAAATTAGAACCATTTTGGCAGTAGCATCAATTCCATGTAGGAGAAGTTCTGAATCACCATTGAGAATACGATAAAATTTCTTCTCCTTCAATGTAGTGAATGCTATTGCACTAGAGTTTTTTCTGATCAATTGATTTATTAGTGTAGAACTTATTTTGTTGGTATGGCAGGCTGGCAGCTAGCTTGTTTTCACTTCAAGTGGCAGTTGGATTCCATGGCATCATGTCCTAATTGCATTTGTGTACCTGCAGTACTTGTATATAGAACAAACTCTATTATGGCAGCAGGGAGAGTGAATAGACATAAGGACTCGTAGGGATGTGAACGGTCATGTCATGCAATCTTGTCCTGCATGGCCGGAGGTCGGCATGGTAGCCATAGGGGAAATCCCTTTTCGCATTGCTTTATACCCTACTAGCTAAATGCCCTTGCATTGCAGCGGGTTATTCAAGATAGGAAAAAAATAAAATAATTTTATCCCTTGTTGAAAAAAAATTAAGCTTCTACTTGGTTGAAACAAGATTCTTCTACAAAAACAGAAAGAAAAATGCTATAGTTAAGACTATACTCCCTCCAGTTCTCAAATTCTTGATGTTTTGGGTGTGGAACCAAAGGCCTCTAATTCTTGACGTTTTGGCATTTGGCTGTGTGCATCGGAGGTGATTGCCCCTGCATGCTGCATAGCCATTACTGATCCCAATAGCGCAGTAGTACAATTAATATGGATAAAACAGGGATTATGCCCCCTAATAAATCTCTCCTTGGTATATGTGATTCACTCCAAAACGTCAAGAATTTGATAAATCGAGGGAGTATTTCTCAATATGAGACATAAATCCATATGCTTTTCAGTACTTAAATATAGATTGATGACTCCATCCGTGTTAACGAAATGTCTATTTCATATGATAATGTGTACTTATTAATAAATTTTGTTGTATAACTCATTTAGAATTAGAATAGAAGCCTTAAGATGAGAAGAAGCAAAGCAATAGAAATTTAAAGAGCTGCATCAAACAGAGTATTGGGGAGCAAGAGCAGTTGGAGACTAACTAAACAAGTACACAAGTACATAAAGTGGTAGCATAGCACTCACATGTGTAATAGTTACATCATGGCCCACACGTTAGTGTTGGTGGTGATGGCATACTCACCACCATTTGTACAAGCTATGCCAACCTTTTACACTTAGGTGGCAATATACATAAGGAAACTAGAGATAAAATAGCGATCCAATCTAAACAAACTAGGAGATATAAGGAAAACTTTTTTTGCAAATATACTTATTATTTCAATAATTTACGTTTATATACATGCATGGGAAGGATTTGCAAAAATATACCCGTCCCGAGGAATGAAAACGCGGGACCTCGACGGTCCGTAGCTCCAAAACACGGGACTAACGGTCCCGCGGCTCCAAAACACGCCACCATGGTAGCAAGTGATTTTTTTTACCGTGTCGGTACTGCTTAGTACTGTTTTGACACTATTTTTGCACTGTTTGGAACTGTTCACAGGTTGGTTCCAGGCAGTAAAACTGCTGGAACTAACATGTGAACAGTGTCAAATAGTGTTTCAATAGTGCCAAAAAGTATTAATTCGATGTCTACCGTGGTGGCGTGTTTTGGAGCCGTGGGACCACGATGGTCCCGTGTTTTGGAGCTGCCGGACCGTCGCGGTACCGCGGGACGGGTATATTTTCGCAAATCCTTCCCATGAAGGTATATAGACGTAAATTATTGAAAGAATAAGTATATTCGCAAATTTTTTTCGAGATATAAGAAGGTTAGAGATCATATCTCGATGCAACAGAAAGAACTATCAATATGCTTGTCTCCGCAATATACTCAGCCATAGAGCCGGTCCATATCAACCTTTCTGTAACCTAGTGTCTCTACTCAATGTGGACTAACCTTGTGACGGGGGCAATGTCTGCAAAGATGGTATTTACTAGTATGTGTGTGATGTTTCTTTGCTTATCGATCTTATGCACAACTTTGTTGAAGGTGTCCTACATGATCCTCGCGAGGGTGTCTCCTGTCACTCACTCCGTGGGCAACTGTGTTAAGCGTGTCGTGGTCATCGTAACATCGGTTTTGTTCTTCAGGACTCCTGTTTCTCCTATCAACTCCCTCGGTAAGTCCGCCATTTCATCTTGATCTCTATTTCTGACCCATTGATTTCTTCCATCGAAGCTCACACGTTTTGTATGACTTCCCTCTGGTAGGCACTGCCATCGCACTTGCCGGAGTTTTCCTGTACTCACAACTGAAGAGACTGAAGCCCAAGCCCAAGGCTGCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028500

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028500&oldid=34757"