BGIOSGA028511

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Revision as of 07:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028511| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028511, complete gene.| tag = P0410E1...")
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Gene Name

BGIOSGA028511

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028511, complete gene.

LocusTag

P0410E11.135

Ensembl Transcript ID

BGIOSGA028511-TA

Ensembl Protein ID

BGIOSGA028511-PA

Length

5849

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16847569..16853417

Sequence Coding Region

16847569..16847730,16848855..16849053,16849851..16849927,16850021..16850063,16850164..16850221
,16852140..16852209,16852950..16853417

Genome Context

<gbrowseImage1> name=IndicaChromosome08:16847569..16853417 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:16847569..16853417 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGTTCCTGCGCCCACGGCAGCAAGACTTCAAGCGCCGTTTGCGGAGCAGGATGTGCCACCTGCAGCAGCCAAAGGTGGCAGCCTCTCTGGGTCGTCCACCAGTAGCCCTTCTGCCCACATTGATGGCCACACGACTTGGCGGCATGGAGGCATCCATGCCAAATCCTATTTCCAGCAGTGGTCAGACTCATGGCAATCCTACTGCTCATGAGCAAATGGAGTTAGGGAACAATGCTATTGTCCCTAGTAACGGAGGGAACAATAACCCTAATATGGCGGCAAGACAGCGGTTACGTTGGACAAATGAGTTGCATGACCGTTTCGTGGAGGCTGTTACTCAGCTTGGTGGGCCTGATAGAGCCACTCCTAAGGGAGTTCTGAGAATTATGGGTGTGCCAGGACTGACAATATACCATGTGAAAAGTCACCTACAGAAATACCGGCTTGCAAAGTACATTCCAGACCCTTCAGCTGATGACAACAAGGATGAAGATAAAGATCCAGGGAATCTGCTTTCTGCACTTGAAGGTTCATCTGGAATGCAGATATCTGAAGCCCTGAAGCTGCAGATGGAGGTCCAGAAGCGGCTACATGAACAATTAGAGGTGCAAAGGCAGCTACAGCTGCGAATTGAGGCGCAGGGGAAGTATCTCCAGAAGATCATCGAAGAGCAGCAGCGTGTCATTGGTGCAGGAGCTTCCAGAGCCACGTCAAGCGAACAATTGCCTGACTCTGTGAAAACTAACCCACCAACTCCAGTACCAATTTCTGAATCTCCAGTTCAGGGTGCATCCCGTAGCAAGAATAGTCAAAGCCAAGTTGAGCCGACGAAGAGCCCTTCGCATGATGATGCTCTCCCGTGTGGTGAACCTTTAACACCTGACTCCAGCTGCCGGCCTGGTTCACCGACGCTCAGCCCAAAGCATGAGCGTGCAGCCAAGAGACAGAGGGGCAGTGATGCAGGCGATGTCACAGCATTCGCAGATGGAGAATTTGTACTTCCACACGGCATCTTTGAGTCAAGCACAGGATCCGAGTTCCAAGAATGTTCGATGCCTTATTCAGGCCATTAG</cdnaseq>

Protein Sequence

<aaseq>MTFLRPRQQDFKRRLRSRMCHLQQPKVAASLGRPPVALLPTLMATRLGGMEASMPNPISSSGQTHGNPTAHEQMELGNNAIVPSNGGNNNPNMAARQRLRWTNELHDRFVEAVTQLGGPDRATPKGVLRIMGVPGLTIYHVKSHLQKYRLAKYIPDPSADDNKDEDKDPGNLLSALEGSSGMQISEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLQKIIEEQQRVIGAGASRATSSEQLPDSVKTNPPTPVPISESPVQGASRSKNSQSQVEPTKSPSHDDALPCGEPLTPDSSCRPGSPTLSPKHERAAKRQRGSDAGDVTAFADGEFVLPHGIFESSTGSEFQECSMPYSGH</aaseq>

Gene Sequence

<dnaseqindica>1..162#1287..1485#2283..2359#2453..2495#2596..2653#4572..4641#5382..5849#ATGACGTTCCTGCGCCCACGGCAGCAAGACTTCAAGCGCCGTTTGCGGAGCAGGATGTGCCACCTGCAGCAGCCAAAGGTGGCAGCCTCTCTGGGTCGTCCACCAGTAGCCCTTCTGCCCACATTGATGGCCACACGACTTGGCGGCATGGAGGCATCCATGGTATTGTGGCGGCGCGGTTTTCAGAAGCAGCAAGAATGGCGGAGCTGTTTCCGTCGCTACTTTCAACAGCGGCGGCGGAGAAAACGACGATTTCTGTTACCGTGGTGGCGCGGCGTGAAGCAGGCGCATCGCGCTCTTTTTGGGGCGGCACTGATTACGATAGAGGGAGATGGGGTTTCTGTTTTCCCTCAGCTGCGCAAATTAAATGGGCCAGATTGGTGGGCTGGGCTTCAATCAGCAGCAGATCCATGTTGGCTTAGTTATGTTTACCACACGGGACAGTCAAGTTGGGCTTTCAGATTTGGATTTTTGCGTTTTGGCGTGGACCTAATTTTCTGAATGGGGTCCTCCTGTCCATGTCCTAAGGAGGCAACATAGGCCAGATTGTTTTGTTTGAGTCTAGCAGGGTCTGCTGCAGCTCGAGGACGAGCTGCTCAAAAAAGAGGGAGTAATGTCATGGGCTTTGGGCTAGGCGTCCTAGGCTCATTGGATAGGATTAGGGTTTGTTAGGATTAGATTAAGGAGTCCTCCATCTATATAAGGAGAGATACTATCCCAGGTCAGCTAGGCATTAGATCAAGATTTATCTTAGTGCCCATCGGCCTGCCTTCTCAGTGCGACGGAGAGCGTCGAGCTGTTTAGGTTCAGGACCGTTCCTTGTTATTTCATCTACTATAATCCAATCTATCCCCATTCATCCCGGTTCTTCTCCACAAATCCTTGCCCGTGACATACTGGTAACTCTAAACTGTGGGTTTCAGTTTCAACTAATGAACTATCCTGTAGGGTTCAAAGCAATACAGAAAATCTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCTCTGAAGCATTAAGTTGGTCTTGAAGTGTTAGCAGGCAGATAATAATTTTAGTGCTATTTTGCATCCATAGACTTGTGTTAGAGTAAAGTGTTCTGAAAATGTCTGTATACCCTGTACACCTCCAGCTTCACAAAAGAGCAAGTTGTGAAATTCTAATGGTGTGTTAAGTTTTTGTTTTCTTTAATTACGAGATGACATATCATCTTATTAAATGTTTTACTTCCTGGATAAATCAAGTGCTGTAAATTCAGGTGATGAGCAAATGCAATGTATCAGCCAAATCCTATTTCCAGCAGTGGTCAGACTCATGGCAATCCTACTGCTCATGAGCAAATGGAGTTAGGGAACAATGCTATTGTCCCTAGTAACGGAGGGAACAATAACCCTAATATGGCGGCAAGACAGCGGTTACGTTGGACAAATGAGTTGCATGACCGTTTCGTGGAGGCTGTTACTCAGCTTGGTGGGCCTGATAGTATGTCCTCCATGATTCAACTCGTTTTTCTGTTTTTGTTGCTCCTTTTATAGTTTTATATTTTATCTAGTACGTAGAGTTAGAGAAGTTGGTTCTAGTATTATACATTACATGTTTGCAACTGTGGTGACTGTTTTTGATTTATAATATGCATTTGCTGTACTGAATGAAAACTATAAGCTTGACAAATATGACAATAGCATGATGGTAATATTCAAGATCTGAACCAAAATGAATGGAATGTAATGGGTATTGATCTATCTTTCCACAAGACCATAAAAGCACAAAAAAAAAAACACTTGCATCTATTCCACCATTTGATTTATTCCTGATTACTTCATCTTCTTGATATTGATCATCTTCCTTTAGAATTAGCTCTGTGAAATATGAGTTTTCCAAGGAGACATTGAATGAGCATGTGATCTTGAAATGGTGATTTATTGGGCAATTGAAAGAATTCTTTGATTCATGGTTTGCATGTAGTTTGCATGCATCCATGGGAAACCCTGATTCTTAATATGATTTGTGTTAAAAATGCAAACAGAGTAGTCCATATGAACATGCTATTAATACTAAAATAAAATATATATTTGATATTCTCAACCTCCCTCTGCATATAGTAGTTTTATTGATTTTATTCCTTGTACACCACTTAATATTCGCAGAATTCATTTATATGCAACTCATGCCTTTGAAAGAACTTGTCAGCTCACAATGTTATGGAACCACTGTTTTTGAACTTCATAGTTTATTAAGTTGGTATGTCTACTTATAATGTAATTCCTCAATTGTGACAGGAGCCACTCCTAAGGGAGTTCTGAGAATTATGGGTGTGCCAGGACTGACAATATACCATGTGAAAAGTCACCTACAGGTAAAATTATTGTGAAACAAATGACCCTTTATCAGTTTGACCATCTATGGCATTTCTTCGTAACTGTTTGCCTGTTTGCTTTTATTTGTCTAGAAATACCGGCTTGCAAAGTACATTCCAGACCCTTCAGCTGATGGTAGGGGGCATGTGTATTCTACTAATCCTTTTAGATATGTCCAAGGAAGAACATATTTATATTATTATTTCACTTTATCTAATCTATATCCTTTGTGTAGACAACAAGGATGAAGATAAAGATCCAGGGAATCTGCTTTCTGCACTTGAAGGTTCATCGTAAGTTCAAATAACTCTACTCCGTTGGTCTTTGTGTTTACTTTTGAGAAACATGGATCTCACTACTAGTAATCAAGGAAAGGAAAAGGGGGCTCAAGTCCAATGGTTTTCTTATGTGTTGATTTGTTCTGTTTAGTAGGTTAAACATAATTTACAGTTAACATCATCATCAAAATGCCTGATGGCATGGGAGAAAAGAAATACATTGCTGCATTTTATATTATTAGTAATGAAAATAAAGGAAGTATCAAGCAACTTGTTTGTAATGATCCAAAGTTTATTGGGGGTAAATACCATTTATATAGAGGCGAGATGGCATGTGGGGAAATTTCTATATTCTTATTTTTGCTGAATTAAAATGAAAACTTCCATCTCTCTATGTTTAGAGATTATCTCTAACAAATTGGACTAGAGATAAGTGAAATCTAAACTAAGGTGGAGATACCATAGAAATTAAACTAAATACTTCCTCCGGTCATAAATATTTGATGTAGAATTGCCTTTGACCATCAATAATCTCTCAGATGCTTACTTAAAACTTTGACCATCAATAATCTCTCAGATCCTTACTTTTAAAGGTAAAATAATGTATATGTAGAATTGCCTTGATAAGTACTAGGGGCAATTGTGTTCTTACCCTTACTTTCACATGCAATTGCGATTTTGCCCCTCTTTTTTAGGGTTTGTGATTTTGCCCTCACTTTTTTCAAACGAAACTTTAGTTTACCCCTACTCTGTTAAAGTCGCTTCACGGTGTTAACATAGCTATAAAAAGACATGTATGCCCTGCATACTTTTAACTACCTTTCTAATAGTATCTGTATGATTCCAAAAATTGGCCGAACTTTCACAAATTTTGAAATAATTTTGATAGGATTTGCACAGAACTTACACTAAGTACAAAAAATTCACCAGTAAAAAAGATTAGTCGCATTCACCAGTAAAATATGAGATTGGAAAAAAGAAAAGAAAAACAGATTAACGCATTGATGCCTACTCTTGAACGAGCTGCTCGTCATGCCTGCTCAAGCACCGCCGGAGCTACATCCTGCTCGCACGCTGCTGTTGATTGCTCACGAGCTGCCGCCGGAACTGCCGCCGCCGTCGCCTGCTCACAGACGCTTCCGCTGCCTGCTACTTATCGTGTTGCTGCTGCTCGACTCGCCTCGTGCAAGTGCAGGCGTCGGCTGCTCGCCAGGCCAGCCCACAACGCCCAACCGCCGCGTCACTTGCTTTTTGCCGCTCTGGCCTGCCCTGCCGGCCTACCCCGTGTACAGCTGCCGCCGCTGATGCCAAAATGTGGTTGCAATTGTTTGCATTGGGGGTATAATGCTCCACTCCTATTTACTCAGTAATTTCATCAATATTTTTTATTCGTTTATTCTAGACCAACTAAACAGGCATCCAAAGTAGGGGCAGACGGCAGCTTGATTTGAAAAAAAAAAAAGCAAGGGCAAAATCACAAACCCTAAAAAACAGAGGTAAAAACACAATTGAATCTAAAAGTAGGGGCAAGAACACAATTGCCCCGTACTATCATAATCTTGTGAACTTATAAGATTTTATAGATAGACTTGTTCTAATGTAAAATTGAATGTCAAAGATTAAAAGATTGAATATAAAATTGAATATTTATGACTAGAGGGAGTAGTAACTAAGTTATCAGGCAACTGTACTTACTGGAGATAATGTTGTTACTGCGAGCCTCCATTGTGCTGCAGCTGTTTCTGGAATTGCAGTAGTTCTGCAGCTATACCTACTAGAGTAGCTATCAAGCTTACCAGCATGTTCTTATCCTTCTATTTTTTGAATTTGCAGTATATACTGTTTACATTGGCCTGATCTCATTACTTTATGTTTCGGGATACCATGTGCCATTTGGTATAAAGAAACTCATATTTTTACACTTCCGTTGCAGTGGAATGCAGATATCTGAAGCCCTGAAGCTGCAGATGGAGGTCCAGAAGCGGCTACATGAACAATTAGAGGTAAGCTCCTGCTGCACTAATATGAAGTACACTTTATGATATGAAACTCACAATTATTGATGTTTTTAGTTGAGTGATGTGTAATGTACCATCAACTAGATTATGGTGTAAATGTTGAGACTTGAGAATAATCCAATAAATAAAATCAAATCGTGGTTAAATTGTAAAAGGGATGCTAAATTCAATGGTGGTTTCTGGTGTACAGAAGTCTCAGTATGATATGGCAGTGGATTATGATGATCTCTTTTGGTGCAACTGCTTTTAGACAATTTGGCGTTTGGCAAACTATTTTTCTTTTATTCTATGCAGCAAACGAAAATACTATTGTGTTCCAAAAATGGGCCACAGTTGGAGACATGAATGTTGGATAACAATTTGATTTGTAACGCAAACTTAACCATTATAAGTTTTCAATGAAAAAAAAGAATAGAACACCACAGCACAGCACAGCACAACAACTGCAAATGGAGCCTAATGTGCCAGAATAATCTTGTATTAGATAGAATTCACAACACCATTTTGTTAGTTGAACTAAATATTGTAATAATTGTACAGAATTGTTTTCATTTTGGAGCTTCGCTTCAGCAATAACCTAGGAGAGATTATGAATCTTACAGTTGTACAGTAAACTTAGAGTAATACTACGTACACAGAGTCTTCCTAGTATACAGCAATTGTTCTACTGAAGAAACCATGTGTAACTTTCTTGTGTAATCTGAACGAACAAACATCTCTTGCAGGTGCAAAGGCAGCTACAGCTGCGAATTGAGGCGCAGGGGAAGTATCTCCAGAAGATCATCGAAGAGCAGCAGCGTGTCATTGGTGCAGGAGCTTCCAGAGCCACGTCAAGCGAACAATTGCCTGACTCTGTGAAAACTAACCCACCAACTCCAGTACCAATTTCTGAATCTCCAGTTCAGGGTGCATCCCGTAGCAAGAATAGTCAAAGCCAAGTTGAGCCGACGAAGAGCCCTTCGCATGATGATGCTCTCCCGTGTGGTGAACCTTTAACACCTGACTCCAGCTGCCGGCCTGGTTCACCGACGCTCAGCCCAAAGCATGAGCGTGCAGCCAAGAGACAGAGGGGCAGTGATGCAGGCGATGTCACAGCATTCGCAGATGGAGAATTTGTACTTCCACACGGCATCTTTGAGTCAAGCACAGGATCCGAGTTCCAAGAATGTTCGATGCCTTATTCAGGCCATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028511