BGIOSGA028525

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Revision as of 07:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028525| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028525, complete gene.| tag = OsI_289...")
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Gene Name

BGIOSGA028525

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028525, complete gene.

LocusTag

OsI_28948

Ensembl Transcript ID

BGIOSGA028525-TA

Ensembl Protein ID

BGIOSGA028525-PA

Length

3694

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17518164..17521857

Sequence Coding Region

17518164..17518424,17518552..17518598,17518689..17518791,17519128..17519214,17519507..17519590
,17519755..17519808,17520682..17520726,17521185..17521265,17521666..17521711
,17521805..17521857

Genome Context

<gbrowseImage1> name=IndicaChromosome08:17518164..17521857 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:17518164..17521857 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGTGCAGTGCGCGGTCCGGCCGCTCGCGGCGCTCCCGGCGGCGGCGGGCACGTCGCGCTCGCGCCGCGTTGGCGGGGCGAGCCATGTCGCTGTTGCTGCCGTGCCGTCTTCGCCCCGCCGGCCGAGGCGCGCTGCCTCCGTCGCGCCGGTCAGGGCGGCCGAGTCGTCCCCGCCGGCCGCGGCGCCCGCGCCGCCGTCGTCCGGGGCCGCGGCCGGGAAGGCCGTCGTCCCCGACGAGGAGTTCACCCTCGCCAAGGTTTCGTTCGGTGTGATTGGGCTAGGTGTCGGTGGCACCCTCTTGTCGTATGGATTCGGGGCGTATTTCAACCTGCTTCCTGGTTCGGAGTGGTCTGCACTTATGCTAACATATGGTTTTCCACTCACCATCATCGGCATGGCATTGAAGTATGCTGAACTGAAACCGGTGCCTTGCACAACCTACGCCGATGCTTTTGCTCTAAGAGAAAAGTGTGCTACCCCTATCCTCAATCAGGTCAGGAGTGATGTTACACGTTACAGATACGGTGATGAGCAGCACCTGGATGAAGCACTGAAGAGGATCTTTCAATATGGTTTGGGTGGTGGAATTCCAAGGCGTAGTGCACCTATTTTACAAAACATTCGGGAAGAATACACTGTTAGCACTGATCTCAGGGCAAAGGCACAGCCAATGTTGGTAACTGATGATGGGAAGTACAGTTTAGTACTTGTATTTGAAGCCAAAGCATTGGAGATATCCGATTTTGAGAAGAGACAGGCCAAATTCACATCCTTTTTTGGTCCTGGGATTAAGGCAGAAATTGGAAAAGGTGGTGATGATCTATATGAAGTTCGTCTTATCTCAGAAACTACTTAG</cdnaseq>

Protein Sequence

<aaseq>MSVQCAVRPLAALPAAAGTSRSRRVGGASHVAVAAVPSSPRRPRRAASVAPVRAAESSPPAAAPAPPSSGAAAGKAVVPDEEFTLAKVSFGVIGLGVGGTLLSYGFGAYFNLLPGSEWSALMLTYGFPLTIIGMALKYAELKPVPCTTYADAFALREKCATPILNQVRSDVTRYRYGDEQHLDEALKRIFQYGLGGGIPRRSAPILQNIREEYTVSTDLRAKAQPMLVTDDGKYSLVLVFEAKALEISDFEKRQAKFTSFFGPGIKAEIGKGGDDLYEVRLISETT</aaseq>

Gene Sequence

<dnaseqindica>1..261#389..435#526..628#965..1051#1344..1427#1592..1645#2519..2563#3022..3102#3503..3548#3642..3694#ATGTCTGTGCAGTGCGCGGTCCGGCCGCTCGCGGCGCTCCCGGCGGCGGCGGGCACGTCGCGCTCGCGCCGCGTTGGCGGGGCGAGCCATGTCGCTGTTGCTGCCGTGCCGTCTTCGCCCCGCCGGCCGAGGCGCGCTGCCTCCGTCGCGCCGGTCAGGGCGGCCGAGTCGTCCCCGCCGGCCGCGGCGCCCGCGCCGCCGTCGTCCGGGGCCGCGGCCGGGAAGGCCGTCGTCCCCGACGAGGAGTTCACCCTCGCCAAGGTGAGCCACCGGGGGCGCGTTCTTTAATTCTTGCGGTAGCAGCAGCAGCAGCAGCAGCGACAGCAGGTGTTGAATTGTAGCGGCGGCGACGAGTTTCTGACGGCGAATGGAATCTCACTTCATGCAGGTTTCGTTCGGTGTGATTGGGCTAGGTGTCGGTGGCACCCTCTTGTCGTAAGTTGGGATTGCACAATTGTGCTTGGCATTATTCAGAATGATGAAGTAGCTTGAAAGGCTTGATTTGGTGCGTTCTTGTGATTTCAGGTATGGATTCGGGGCGTATTTCAACCTGCTTCCTGGTTCGGAGTGGTCTGCACTTATGCTAACATATGGTTTTCCACTCACCATCATCGGCATGGCATTGAAGGCAAGAACTATCCCCCATGTGACATGTACAAGAGGAGAGGCAATGAGGCATATGACATGTTGAGACATATCAATTGTATTTGTTTAGATTGTTTGACCATACTGGTCAACTTAAGACCTTCCTCAGGAAGGTGCCTTTTGGCAATTAGCAGTCATTGGCCTTTCATTGAGTTTGCACCTTCATATTACATACTTGAAAATAACTCTGCAGCAATAGAATGCAGTTTACTGTGTTGGAGTTTCAGATGAGCAGCTGTCCTTAGTTTGGAGTTTAGGTTGAAGGTTGTCAGCTTCTTTGTTGCAGTGTGCACTGATTCTTAAATTTTTCTACATGCAGTATGCTGAACTGAAACCGGTGCCTTGCACAACCTACGCCGATGCTTTTGCTCTAAGAGAAAAGTGTGCTACCCCTATCCTCAATCAGGTACTATTCAATTTCCATTATCTAGGACATATGCTCCACTTCCACTGCTCAAATTTAACTATTTATTCATGGTGTACTTGAGCTGTTTATAATCTGTTTTCTTCTTATTTGGAGAAAAATAAGGCTACATGATGAGTACAATCCTCTTAGTGGATTTCTTACCATTGGTGCCAGGGGGGATTTAAGTGTTGAAAATTGTAGGAAGAGGCGTGAGTAGACATTAGCGAATTTGTGGATTTTGGAAAGATAACACCGGCAATAGTATTGATCTTCCAGCTTTACTTACCTCTAGGTCAGGAGTGATGTTACACGTTACAGATACGGTGATGAGCAGCACCTGGATGAAGCACTGAAGAGGATCTTTCAATATGGTTTGGTAATTCCTTTTTTTGCCCTTTTTTACTAACTGGACATTGTTTTGGCTCATCTATTTTTTATCAATAATTCCATGTTCTGTTATTAGAAGTTTTGCAAGGCAAGAACTTCCTTGCTTTATCCTACTTATTGATCTGCCTTCCTTTTGCACAATCCAACTGACAGGGTGGTGGAATTCCAAGGCGTAGTGCACCTATTTTACAAAACATTCGGGAAGAAGTAAGTTCCCAATACATTTATTTTTTTTCTGTGAAGTAGTCTTTCCAAAATATTGCATAATGTAAATCACACATATCATTTTCATAGTTTATATTTCATACTCGTTGGAAGAGTTTAATTACAAAATGGACCCCTCAAGTTTCACAAAAGGTTACTTTGGTCCATCAAGTTTAAAAGAAGCCACTTTAGACCCTGCTTGGGTGAGCTTCAGATTTATCTGAAGCTGATATCAAACAAACCCAACTAATCCTGTAAGGATGATTTACTTAACATGCCATCCAAGACCGGTCCAAATTGTTCACACAATATCTGCCGCATGTGAATTGGCATTTGGCACCTGTTACTTCAATGTGGACTGTAGGATGTTACTGAAACAATTCCTACAGTAACATCAAGCAAAGTTGATGATTCAAAATATTTGCCTGTAAAAGAATATAAATGGGCAAAGTAGCGATTTTTAATGGCCTAGACCCTTTTACTCTAACCAGACTACTAAAAGGATTAGTGCAGTGATTAGCATGTCAAATGTCAACTTGTTACATAATGGCCAATTTGTGGTGTTCTTGAACTATAGATACATGAAAAGGAGGCAGGAAATTTAAATATGAATATCATAAATATGAATTTTTCTTGTGGGAAATAATTCCTCATTGATGTTTCTGTGTCCACCATGCATCTAAAAATCCTGCATCCCTCCATTTCTAATGGAAGTTTTGTCCCAATCGATTGTATCATCATTAAAGTCATGACAGATGAACTCAAATGATATTAAGTCAAATTAATAGCAGATTTTTCAGCTAGCATCAAATGCTATTTCTAGATCTCCGTAGTTTTCCTTGGTCATTGTTTCCTTTGTTTAATGGCTTCAATTAGTACACTGTTAGCACTGATCTCAGGGCAAAGGCACAGCCAATGTTGGTAAGAGTGGTGCCAAAGATCCTTTGGCTTGATTTTATTTTTATTGAAATTATTGTCAACTTTTGTTCATTGGACAAGGTAGTACTAGGCCTTAGAGGGCTCGGCCCCTTCTTTTCTCTTCGAGACAAGCCTTAGGCCCTGTAGTTGATTCTACTTTACCCAGTTAATGAACATGGCCCAGTTATATGTTAATGTTTCCTAGTTGTTCTTCATCTGATATTCCTCAAGTGTAAATGATATAGCTTTTGGCTGAACTCATGATGAAGGAATTGCACAAAAATAATTCAGACAATCTTTGAAACTGTCCAAATGCCTTGTGGAGATTCCAATGGGTTATATTTGTTTATTGATATCTCCAGTTTTACCCCAAAAAACATCTTCATGGGTTACAGAAAGAATTTGTCTTGTTCACTGGGTGCGATTCTTGGTTAAAGGACTCAGTAGTTTTCCCCTTGTAGGTAACTGATGATGGGAAGTACAGTTTAGTACTTGTATTTGAAGCCAAAGCATTGGAGATATCCGATTTTGAGAAGAGACAGGTGAATCCCCTCTCCTAATTTCTAAATATAATACAGCACGGCTTCCATTGTGGACTGAGATGCATGTGGTATGCCTTTGTGGTCAGATCTAGATACATGTACTAGTCTTAAGCTCTATACTAAACTAATCTCATGGTACAAATACATGAATTTTTAGCAGCTTTGGGTTGTGGAAAAGATGAGGTTCAAAAATTAGCAGTAGAAGAAAGTGTAACCCAAAACTTGATGCTCAAAAATGACAAAATTCTGTGCCTAGATAGCTCCCATAAACTATTTCTTTGATGTACTGTGTACTTGGGCGAGCTGTTCGAGAACAATACATACTGTCGTCATGCTTATGATCCAAAATAGAATTAAATATTAACATTACTGATTCCTTGCAAACATTTTTCCCACGCAGGCCAAATTCACATCCTTTTTTGGTCCTGGGATTAAGGCAGAAATTGGTGAGTTGTATTATTTTTTCTTTAGCTCCATTAGATTTTGAAGCTTGGTTTGTCTATATCATCCATTGTCAATTTATGTTTCTGATGATACAGGAAAAGGTGGTGATGATCTATATGAAGTTCGTCTTATCTCAGAAACTACTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028525