BGIOSGA028543

From RiceWiki
Revision as of 08:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028543| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028543, complete gene.| tag = OJ1484_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028543

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028543, complete gene.

LocusTag

OJ1484_G09.113

Ensembl Transcript ID

BGIOSGA028543-TA

Ensembl Protein ID

BGIOSGA028543-PA

Length

3756

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17942681..17946436

Sequence Coding Region

17942681..17942832,17942925..17943103,17943865..17943903,17944079..17944107,17944292..17944354
,17945702..17945805,17945926..17946436

Genome Context

<gbrowseImage1> name=IndicaChromosome08:17942681..17946436 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:17942681..17946436 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGCCGCCGCCTGCATCTCCTCCTTCCCTCCACCGCCAATGGCCGCCGCGGCGGCGCCGGCGCCGGAGACCACCATCGACGTCTTCGTCGTCGCGCAACCACACGCCGGTGACCGCCGCCGCCGACAAAAGGTACAGCATCGTTCGGTCAGCTGCGAGGGGGACGTCGTCGCCGGCGGCGGGAGGACGGTGAGGAGGCCGCGGGCGGTGGCGCGGACGCTGGAGTGCGAGCGGCGGGTGGTCGGCGAGGGGTTCGCGGTGAGGAGGGGCATCGGGAGGAAGGAGCTCGACAGCCTCGATCCTTTCATCTCCCTCGACGAGTTCGAGTTTTCTCCACCAGCCGGCTTCCATGATCATCCCCACAGAGGATTCGAGAATGTTACCTACATGCTCGAGGGAGGCTTCAGTTACCATGACTTTTCAGGCCACAAGGGCACCATCAACACAGGAGATGTTCAGTGGATGACGGCGGGGCGCGGCGTGGTGCACGCGGAGATGCCCGGCGGCCATGGCGTCCAGAGGGGCATCAACCTCTGGATCAACCTCTCCTCCAAGGACAAAATGGTGGAGCCGAGGTACCAGGAGCTGGCGAGCCACGACATCCCCGCCGCGGAGCGCGACGGCGTGTCCGTCAAGGTGATCGCCGGCGAGGCCCTGGGCGCGCGCTCGCCGCTCCAGACGCGCACCCCGGCGCTCTGCCTCGACGTCGCCATGCGGCCCGGCGCGCGCCTGCGCGCGCCCGTCCCGCCCGGGTGGAGCGCGTGCTCGTACGTCATCGACGGCGAGGCCGTCTTCGGGGACGAGGCCGCGGCGGCGGGCGCGCACACCTGCGTCGTGTTCGGCGGCGGCGGCGACGGCGTGGCCGCGCGGGCGACGGAGCGCTCCGCGGCGAGGTTCCTGCTGGTGGCGGCGCCGCCGCACGGCGAGGCCGTGGTGAAGGACGGGCCGTTCGTGATGAACACCCGGGAGGAGGTGGAGCAGGCCAGGGACGACTACCGGAACCGCCGCAACGGCTTCGAGATGGCCGCCGGCTGGAGCTCCGACCACGTTGCCACCGCCGCCGCGGCGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MSAAACISSFPPPPMAAAAAPAPETTIDVFVVAQPHAGDRRRRQKVQHRSVSCEGDVVAGGGRTVRRPRAVARTLECERRVVGEGFAVRRGIGRKELDSLDPFISLDEFEFSPPAGFHDHPHRGFENVTYMLEGGFSYHDFSGHKGTINTGDVQWMTAGRGVVHAEMPGGHGVQRGINLWINLSSKDKMVEPRYQELASHDIPAAERDGVSVKVIAGEALGARSPLQTRTPALCLDVAMRPGARLRAPVPPGWSACSYVIDGEAVFGDEAAAAGAHTCVVFGGGGDGVAARATERSAARFLLVAAPPHGEAVVKDGPFVMNTREEVEQARDDYRNRRNGFEMAAGWSSDHVATAAAAH</aaseq>

Gene Sequence

<dnaseqindica>1..152#245..423#1185..1223#1399..1427#1612..1674#3022..3125#3246..3756#ATGTCTGCCGCCGCCTGCATCTCCTCCTTCCCTCCACCGCCAATGGCCGCCGCGGCGGCGCCGGCGCCGGAGACCACCATCGACGTCTTCGTCGTCGCGCAACCACACGCCGGTGACCGCCGCCGCCGACAAAAGGTACAGCATCGTTCGGTGTACTGTGTCTCGATCGAGATCTTTAATTTCTCCTCGTTTGAGTTTGCTTGAATTCTTGGTGGTTTTTGTGGTCGATCCTGGCCGCATGCAGCAGCTGCGAGGGGGACGTCGTCGCCGGCGGCGGGAGGACGGTGAGGAGGCCGCGGGCGGTGGCGCGGACGCTGGAGTGCGAGCGGCGGGTGGTCGGCGAGGGGTTCGCGGTGAGGAGGGGCATCGGGAGGAAGGAGCTCGACAGCCTCGATCCTTTCATCTCCCTCGACGAGTTCGAGTGTACGTACTGTACCACCACCCATCTACCTTCTCTTCTCTCGCTCATCTCGCCTCCCTCTCTTCCCCTCTAGTAGTGTACAAAAGTTGAAAACGTACGTCTTTGACTGAATCCCAAAAAATAAATTTGTCCCTTACAAGATGAGGATTTTTGGATTAATTAAACGGCTGGACGGTTTTATAGCATTGAGCACATACTAATACATGTTCTTTTAAGTAAGTGATGTCATTAACTTTTTTATGATGTTTGATCATCTTATTTTTTTAAAAAAAATGATTCAGTATCATTTATTTTGTTGTTATTTGTTTTATCATTAACGGAATTCAAGAATGACTTTTTTTAATGGCTGTAGTAAATTTTTGAATAACTGAATAAGACAAATATTTAAATTTCAATCAAAAGTTAACAACGTCATCTATTAAAAATGAGATGGAGTATCAATGACGTACCTACATGTAACTACCCGATGTCCTTAGACACCAGGTAGCTTGTCTATTTCTAGCTATTTTATATCATATTAATCATCATATAACTCAAAAATTAGACTATAAGTAATTTTTATTTTGAGTTCACCAACGGAGGATATTATGTAGGCACACGAATTAATTAGTTGGAGTAACCAGTGATCAAGAAAAATGGTTTCCAAACGGATATATGTTGAGTATCGTGTAATGTCCCTTCAGGTCACCAACAAGCTCTCATATGATTATTCAACAGAGTATTCACACCTTGTTAACGTTCCCTTTCTGTTTCTATTTTACAGTTTCTCCACCAGCCGGCTTCCATGATCATCCCCACAGAGGTTTGTGATTTCTTAATCCCCGTTGATACAGCTGTGCATAGTTTTATATTTACACGCTAATCTCATGAACAATTAATTTAGCTTAAGTTTTAATAAAGTATAGTTATTATATGTTATTCCTGAATTCTGATCTTACAATTTTCTTCCATTTTGTATGTGGCACCTGTTCCTTCAGGATTCGAGAATGTTACCTACATGCTCGAGGTAACTAATTAACAGTTTGATTCATTTCCATCAACAATATTGTAGTATTGGCGTATCAGTTGTAATAGGAAAACCACCAAGAATATATTTAATCTGTCACACAATTCCATCTCATTCTTTCTAAAAGAATATTTAGTGAAAAATTAACTGTTGTTCTTAACTAATTTTAATTTGTTGTTTTCAGGGAGGCTTCAGTTACCATGACTTTTCAGGCCACAAGGGCACCATCAACACAGGAGATGTTCAGGTTAGGTCTCCAACTGTACCATTAAACTTAGAGTTGGACTACTCAGAGCAATATCCTTTATAACTTGTCCCTGTTTTCCTTTTTCCTTATTTTCGTTGAAATTAACAGCCTAACAACAACTATGAATAGTGTTATAGTACTGTTCTTCAAGTAATTACTTCTCCATTTCAAATTACTTGTCGTTCTAACTTTATCTAAAGCCAAACATTTATATCATTGACATTTACTTTCTAAAAGTTCATATAATTTAACATCATAAGTTTATTTTTTAGATTCACCATAAAAAAGACTTTCATAATATATAATTCACTTGTAGTTATAATAGCTAGACGAATTTTTAGAAATATATATTAATGGCTAAAGCTGATACAGGTGTTTGAACTATGACAAAAGATATAACGACAATAATAATTTGAAAGAGTAATATAATCGGGTACAGAGATGTAGGGGTAGTACTTATTAAAGACATTAATTCCTCGAGAACGACTTGTCTGAAAACTGAGTTAATTGTATTTACTTTCTGAAAACTTGAAATGACTATGACATAGTGTCAGCGTGTGATCACTAGTGGAGTAGGTACTCTAAACATGCAAAATGTTGCTATCTACTTTTTTTAATAGTGAAGTACAACTCGTGGCATCTATTCATCTGGAATATACACAACCATTGCATATTGCCGTCACGCCGAAGAAAAAGGAACAAAAGGTTACTATCGAACAAATAAGAAAGAACACTATGTTTGATTGTTCTAGGGGATAAAGCTGGAGTTCTACTCCAAGTAGTTTGAGATTTATACACCTGGAAAGTATTTATGGCTCTTTGAAACGTAGGAATCTTACAGGAGAAGTCCTCTAAAACTCCTCCATTCCGAATGCGACCTGAACTTAAACTTCCACTGGATACCTTTTGATTGACTATAAGACTATTTTCTGTGCATTTTGCAGTGCATGAGATGCAACTTTGCTTGTTACTTTTGATAACCACAAAAGGATTTTTGACAACAAACAGTAGGGGTCATTTTTAAAATAAATTGATCAAACGAATTCATGTGCAGATTAATTGGAAAGGAACAGAGGGAATATTGGTTATGTTCTTCCCTCTTCTTTTGCAACTTACCTCCATTGTTTTCCGTGCATGTTTTTTAAAATGTTAAATGTATGTCTTTTCAAAAAAAATATTACAGAAAAATTGCTTTAAAAATCATATTAATCTATTTTTTAAGTTTTTTTAGTTTAATAATTAATTAATCTCGCTCTGATCACTTGCTTTGTTTTCCATGTAACTTGCCTCCCGAACTCAGCCCGGTAAAGAGAGCTAACTTGGTGTATGCATGGTTGTCGTTGGCAGTGGATGACGGCGGGGCGCGGCGTGGTGCACGCGGAGATGCCCGGCGGCCATGGCGTCCAGAGGGGCATCAACCTCTGGATCAACCTCTCCTCCAAGGACAAAATGTACTCTTCTTCTTCCTGTGCCTCTCTCATCAGCCGCAGCAATGGCGGCTACTACGTAACAGTTGCTGACCACTCGCTGTGCCGTGCCGTGCCGTGGCCATGATGCGTGCGTGCGTGCAGGGTGGAGCCGAGGTACCAGGAGCTGGCGAGCCACGACATCCCCGCCGCGGAGCGCGACGGCGTGTCCGTCAAGGTGATCGCCGGCGAGGCCCTGGGCGCGCGCTCGCCGCTCCAGACGCGCACCCCGGCGCTCTGCCTCGACGTCGCCATGCGGCCCGGCGCGCGCCTGCGCGCGCCCGTCCCGCCCGGGTGGAGCGCGTGCTCGTACGTCATCGACGGCGAGGCCGTCTTCGGGGACGAGGCCGCGGCGGCGGGCGCGCACACCTGCGTCGTGTTCGGCGGCGGCGGCGACGGCGTGGCCGCGCGGGCGACGGAGCGCTCCGCGGCGAGGTTCCTGCTGGTGGCGGCGCCGCCGCACGGCGAGGCCGTGGTGAAGGACGGGCCGTTCGTGATGAACACCCGGGAGGAGGTGGAGCAGGCCAGGGACGACTACCGGAACCGCCGCAACGGCTTCGAGATGGCCGCCGGCTGGAGCTCCGACCACGTTGCCACCGCCGCCGCGGCGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028543