BGIOSGA028578

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Revision as of 08:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028578| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028578, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA028578

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028578, complete gene.

LocusTag

OSJNBB0011E04.123

Ensembl Transcript ID

BGIOSGA028578-TA

Ensembl Protein ID

BGIOSGA028578-PA

Length

5606

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19057065..19062670

Sequence Coding Region

19057065..19057106,19057587..19058914,19059000..19059110,19059449..19059728,19060004..19060125
,19060180..19060285,19060543..19060749,19060859..19060984,19061451..19061549
,19061865..19062056,19062152..19062670

Genome Context

<gbrowseImage1> name=IndicaChromosome08:19057065..19062670 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:19057065..19062670 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAAGGAGGCCGTCGAGGACTGGCGGCGAAAGCAGCAGGACATTGAAGTGAATAGCAGGAAGGTCGAGGTTTATGATGGCACCCAATCATTTCATCAGACAGAATGGAAGAAGCTTCAAGTTGGTGATATAGTTAAAGTGAAGAAAGATGAGTTCTTCCCTGCTGACCTTGTTTTGCTTTCTTCGAGCTATGAGGATGGAATATGTTATGTTGAGACAATGAATCTTGATGGAGAGACAAACTTGAAGCGAAAACAATCATTGGACGTGACTGTGGGCTTGAATGAGGATCATTCTTTCCACACCTTCAAGGCTTTCATTCAATGTGAGGATCCAAATGAGAAATTATATTCCTTTTTAGGGACATTGCACTATAATGGGCAACAATATCCTCTATCCCCACAACAGATCCTGTTAAGGGATTCAAAGCTTCGGAACACAAATCAAATTTATGGCATTGTAATTTTCACGGGGCATGACACAAAGGTAATGCAGAATGCAATGGAACCACCATCAAAGAGGAGTTCTGTTGAACGAAGAATGGATAAGATCATTTATCTTCTTTTTGTAATTCTCTTTGCTATTGCATCGTTTGGGTCGGTTATGTTTGGTATCAGAACGAGGGCTGAATTAAGTGCAGGGAACTATGCCTGGTACCTAAGGCCAGATAACTCAACTATGTACTTTGATCCAAACAGAGCAACATTAGCAGCTATTTGCCATTTTCTGACAAGTCTCATGCTGTATGTGTGCTTGGTGCCCATTTCCTTGTATATATCGATAGAGATCGTTAAAGTCTTACAGAGCACATTCATAAATCAAGACCAGAACATGTATTGCGAAGAGTCTGATAAACCAGCAAGGGCTCGCACATCAAATTTGAATGAGGAACTTGGTCAAGTGCACACCATACTCTCTGACAAAACAGGAACCTTAACATGTAATTCGATGGAGTTCCTGAAATGTTCCATTGCTGGTGTTGCTTATGGAAATAGGCCTATAGAAGTGCAGATGCCTTATGGAGGAATAGAGGAAGAATGTGTTGATATTGGGCAGAAGGGTGCTGTTAAATCTGTAAGACCGGTAAAGGGATTCAACTTTACTGATGACCGCTTGATGAATGGACAGTGGAGCAAAGAGTGCCATCAAGATGTTATAGAAATGTTTTTCCGTGTGTTAGCTGTCTGTCATACTGCAATTCCTGTTGCAGATAGAACTTCTGGTGGGATGTCTTATGAGGCGGAATCACCTGATGAAGGAGCTCTTGTTGCAGCTGCAAGGGAACTTGGTTTTGAATTTTATCATAGGTCACAGACAAGCATATCAGTGCATGAATATGATCCTGTCTTCGGTAGAAAGGTGGATAGAACCTATAAGCTACTGAACACCCTAGAGTTTAGCAGTGCCCGCAAGCGTATGTCTGTCATTGTGAGTACAGAAGAGGGTCGGCTATTTCTGTTCTGTAAAGGGGCAGACAGTGTTATTCTTGAGAGGCTCTCTAAGGATAATAGCAAAGCTTGTCTGACAAATACAAAGTGCCACATCGACGAGTATTCTGAGGCAGGTTTGCGGACTCTGGCACTTGCATATCGTGAACTTACTGAGGACGAGTATGTTGCGTGGAATATGGAGTACTCAGCTGCAAAGAATTCTGTACATAATGATCATGATGTAGCTGTTGAGAAGGCATCAGAAAATATCGAGAAAGATTTGGTTCTTTTAGGTGCTACTGCTGTGGAGGACAGATTGCAAAAGGGGGTCCCAGAGTGTATTCACAAACTAGCTCAAGCTGGAATTAAGATCTGGATTCTCACAGGTGACAAATTGGAGACAGCTGTCAACATAGGGTTAGTACCATATGTTGCTTACGTTCCTGACAATTATGCTTGCAACCTTTTGAGGAAAGGGATGGAGGAAGTTTATATAACTCTGGATAACCCAGGCACGAATGTTCCTGAGGAACACAATGGAGAAAGCAGTGGAATGGCTCCATACGAACAAATTGGTAGAAAGTTAGAAGATGCTCGAAGGCAAATTTTGCAGAAAGGAACTTCAGCCCCTTTTGCCCTTATAATTGATGGCAATGCTCTAACACATGCTCTCATGGGTGGTCTTAAAACCGCATTTCTGGATCTAGCAGTTGATTGTGCGTCTGTTTTATGCTGTCGCATATCCCCGAAACAGAAAGCGCTGATTACCAGACTGGTTAAAAATAGGATAAGGAAAACCACACTAGCAATTGGCGATGGAGCAAATGATGTCGGTATGCTACAGGAGGCTGACATTGGGGTTGGAATAAGTGGTGCTGAAGGAATGCAGGCTGTGATGGCAAGTGACTTTGCAATAGCTCAATTTCGTTTTTTAGAACGGTTACTCCTTGTCCATGGTCATTGGTGTTATCGCCGAATTGCAGCGATGATATGCTACTTTTTCTTCAAGAATATCACATTTGGCTTTACACTTTTCTGGTTTGAGGCTCATGCTATGTTCTCAGCCCAACCTGGTTACAACGATTGGTTCATATCTTTCTACAATGTTGCCTTTACATCTCTCCCGGTCATTGCTCTAGGTGTCTTTGATAAAGATGTCTCTTCCCGTGTTTGCCTCGAGGTCCCTTCATTACATCAAGATGGCGTGAATAATTTATTCTTCAGCTGGTCTCGTATACTCAGTTGGATGCTGAACGGAGTTTGCTGTTCAATAATAATATACTTTGGAGCCCTCCATGCTGTCCTCATTCAAGCTGTCCGACAGGATGGCCACGTTGCTGGATTTGACATCCTTGGAGTGACTATGTATACTTGCGTAGTTTGGACTGTCAACTGCCAACTAGCACTCTACATCAGCTACTTCACCTGGATACAGCATTTCGTCATCTGGGGCAGCATACTGATTTGGTACACTTTTCTGGTCATCTACGGCTCGTTTCCTCCAACAATATCAACCAGCGCATATCATGTTTTCTGGGAAGCTTGCGCTTCTAGCCCTTTATACTGGTTATCCACTCTAGTCATTGTTGTGACAGCCTTGATCCCATACTTCCTCTATAAAATCACACGGTCGCTGTTTTGTCCACAGCATTGTGATCAAGTTCAGAGACCTAACTCAAAAGAATTGGTGGCTCAATAA</cdnaseq>

Protein Sequence

<aaseq>MAKEAVEDWRRKQQDIEVNSRKVEVYDGTQSFHQTEWKKLQVGDIVKVKKDEFFPADLVLLSSSYEDGICYVETMNLDGETNLKRKQSLDVTVGLNEDHSFHTFKAFIQCEDPNEKLYSFLGTLHYNGQQYPLSPQQILLRDSKLRNTNQIYGIVIFTGHDTKVMQNAMEPPSKRSSVERRMDKIIYLLFVILFAIASFGSVMFGIRTRAELSAGNYAWYLRPDNSTMYFDPNRATLAAICHFLTSLMLYVCLVPISLYISIEIVKVLQSTFINQDQNMYCEESDKPARARTSNLNEELGQVHTILSDKTGTLTCNSMEFLKCSIAGVAYGNRPIEVQMPYGGIEEECVDIGQKGAVKSVRPVKGFNFTDDRLMNGQWSKECHQDVIEMFFRVLAVCHTAIPVADRTSGGMSYEAESPDEGALVAAARELGFEFYHRSQTSISVHEYDPVFGRKVDRTYKLLNTLEFSSARKRMSVIVSTEEGRLFLFCKGADSVILERLSKDNSKACLTNTKCHIDEYSEAGLRTLALAYRELTEDEYVAWNMEYSAAKNSVHNDHDVAVEKASENIEKDLVLLGATAVEDRLQKGVPECIHKLAQAGIKIWILTGDKLETAVNIGLVPYVAYVPDNYACNLLRKGMEEVYITLDNPGTNVPEEHNGESSGMAPYEQIGRKLEDARRQILQKGTSAPFALIIDGNALTHALMGGLKTAFLDLAVDCASVLCCRISPKQKALITRLVKNRIRKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRIAAMICYFFFKNITFGFTLFWFEAHAMFSAQPGYNDWFISFYNVAFTSLPVIALGVFDKDVSSRVCLEVPSLHQDGVNNLFFSWSRILSWMLNGVCCSIIIYFGALHAVLIQAVRQDGHVAGFDILGVTMYTCVVWTVNCQLALYISYFTWIQHFVIWGSILIWYTFLVIYGSFPPTISTSAYHVFWEACASSPLYWLSTLVIVVTALIPYFLYKITRSLFCPQHCDQVQRPNSKELVAQ</aaseq>

Gene Sequence

<dnaseqindica>1..42#523..1850#1936..2046#2385..2664#2940..3061#3116..3221#3479..3685#3795..3920#4387..4485#4801..4992#5088..5606#ATGGCCAAGGAGGCCGTCGAGGACTGGCGGCGAAAGCAGCAGGTGCGGTTTGCCCTGCCACCTTCGCTACCCTACCGTTTTTGGTTAGCGGATCGGGCAATGGGAATGACGGCCTTTCTGGTCTTACTGTACATACATGTTACTTTCTTTATTTTCATAGGCGACCTATTGATTGTGATCTCAAATGGATGTTTATAATCGCAATAACTTTGCATTCATTTTTGTGTCTATGCTTGGTTCCACATTGTGTTGATGGTGCGTTCTTGCTACTTTGTGCTGTCCCGATTTTTTTTTTTTTTTGGCATCATTACCTGATTACCTGCAAATGCCAGTTCTGGGATGCTTGTATGGTAGGCTATTGGGGCATGTACTGTTTACTTCTTTTTGTTAGTACCGAACAGAATGTTGCAATATTGACTGATTTGATACATTTTAAACCGTTTGCACTTGATCGATATGTACAATATTGTTTTGGTAAATTGTTTGGCAAGTGTAAATTAGTTTTTTTTTGCTTTTGTTTAGGACATTGAAGTGAATAGCAGGAAGGTCGAGGTTTATGATGGCACCCAATCATTTCATCAGACAGAATGGAAGAAGCTTCAAGTTGGTGATATAGTTAAAGTGAAGAAAGATGAGTTCTTCCCTGCTGACCTTGTTTTGCTTTCTTCGAGCTATGAGGATGGAATATGTTATGTTGAGACAATGAATCTTGATGGAGAGACAAACTTGAAGCGAAAACAATCATTGGACGTGACTGTGGGCTTGAATGAGGATCATTCTTTCCACACCTTCAAGGCTTTCATTCAATGTGAGGATCCAAATGAGAAATTATATTCCTTTTTAGGGACATTGCACTATAATGGGCAACAATATCCTCTATCCCCACAACAGATCCTGTTAAGGGATTCAAAGCTTCGGAACACAAATCAAATTTATGGCATTGTAATTTTCACGGGGCATGACACAAAGGTAATGCAGAATGCAATGGAACCACCATCAAAGAGGAGTTCTGTTGAACGAAGAATGGATAAGATCATTTATCTTCTTTTTGTAATTCTCTTTGCTATTGCATCGTTTGGGTCGGTTATGTTTGGTATCAGAACGAGGGCTGAATTAAGTGCAGGGAACTATGCCTGGTACCTAAGGCCAGATAACTCAACTATGTACTTTGATCCAAACAGAGCAACATTAGCAGCTATTTGCCATTTTCTGACAAGTCTCATGCTGTATGTGTGCTTGGTGCCCATTTCCTTGTATATATCGATAGAGATCGTTAAAGTCTTACAGAGCACATTCATAAATCAAGACCAGAACATGTATTGCGAAGAGTCTGATAAACCAGCAAGGGCTCGCACATCAAATTTGAATGAGGAACTTGGTCAAGTGCACACCATACTCTCTGACAAAACAGGAACCTTAACATGTAATTCGATGGAGTTCCTGAAATGTTCCATTGCTGGTGTTGCTTATGGAAATAGGCCTATAGAAGTGCAGATGCCTTATGGAGGAATAGAGGAAGAATGTGTTGATATTGGGCAGAAGGGTGCTGTTAAATCTGTAAGACCGGTAAAGGGATTCAACTTTACTGATGACCGCTTGATGAATGGACAGTGGAGCAAAGAGTGCCATCAAGATGTTATAGAAATGTTTTTCCGTGTGTTAGCTGTCTGTCATACTGCAATTCCTGTTGCAGATAGAACTTCTGGTGGGATGTCTTATGAGGCGGAATCACCTGATGAAGGAGCTCTTGTTGCAGCTGCAAGGGAACTTGGTTTTGAATTTTATCATAGGTCACAGACAAGCATATCAGTGCATGAATATGATCCTGTCTTCGGTAGAAAGGTGGATAGGTGCTTATCGTTTCCACTGTTCTTAGTGCTTATTCTTCAAAATGGTGATGATTGCTTCCTACATGATGCCTAATTTTTATTTCAGAACCTATAAGCTACTGAACACCCTAGAGTTTAGCAGTGCCCGCAAGCGTATGTCTGTCATTGTGAGTACAGAAGAGGGTCGGCTATTTCTGTTCTGTAAAGGGGCAGACAGGTTTGATATGTTCCTTCTCACATGCGATGGAAATTTTTTACGCTTTACGAAATAGGGAATTGTTAGTTTATCTTTATTTATTGCACCCTTGATAAGTTCATCACATCTCCAAATCACACTACTATTTTCTTGTAAACTGGGTCAGCCAATAGATTTTGTGTTACTACAGTTTTCTGTAGAGTGAAATAAGCTTGAATTGTCAACCTGTACTCTTGCAAGACACAAATTTCACATGCTAGCTTTTTGCTTCTAAAAGTTCTATTAATGTTATCTTCTATCTGCTGACATTTTATTCCTCAGCATTCGCTTAAAATTTATATTCTATCTTTGTGCTTCAGTGTTATTCTTGAGAGGCTCTCTAAGGATAATAGCAAAGCTTGTCTGACAAATACAAAGTGCCACATCGACGAGTATTCTGAGGCAGGTTTGCGGACTCTGGCACTTGCATATCGTGAACTTACTGAGGACGAGTATGTTGCGTGGAATATGGAGTACTCAGCTGCAAAGAATTCTGTACATAATGATCATGATGTAGCTGTTGAGAAGGCATCAGAAAATATCGAGAAAGATTTGGTTCTTTTAGGTGCTACTGCTGTGGAGGACAGATTGCAAAAGGGGGTATGTCGATTTCATTTGAGACTTTAAAGTTATCCTCTTCTCTTTTTTTTTTTCATTTACTATGCTTGCTCACGGTGTAACATGGCCTCCTGTTCAGTCTGAAAAGCCCCAAATGATTTTTCTATTTGGTTGCTGTCACATAGCTTGCACTTTTCATATTTTGTGCCATTGCTCTCATATCTGTTGATGGTAATTTCTCCTGAATTTTTTCGTACGTAGACAAAACACCCTACTCATTTTGTGGGACATGTTCAATGCATGTGTTGACTCTGTAGGTCCCAGAGTGTATTCACAAACTAGCTCAAGCTGGAATTAAGATCTGGATTCTCACAGGTGACAAATTGGAGACAGCTGTCAACATAGGGTTAGTACCATATGTTGCTTACGTTCCTGACAAGTAAGATCTCACAGGACTATATAGTTTTCACACATATTTGTGCTTGATATGCAGTTATGCTTGCAACCTTTTGAGGAAAGGGATGGAGGAAGTTTATATAACTCTGGATAACCCAGGCACGAATGTTCCTGAGGAACACAATGGAGAAAGCAGTGGAATGGTATATAAATATTTAACTAAGAGTGGATGCATTGACCTATTTGCAATTATTTTCATGTCAGCACAATAACAGAATTTTAAGCTGTTCTTGAAATAACAGTATGTAACTGCTAAATATGAGTATCTAATGTGCACGACAACGTCAATTAGTATGAATACATCTTGTCATCTTGAAAGCAAATAAAACAGAGGATGTATAGTATCAGTTTACTTCATGTGCACTCTACTGTTTCTTACCTTCTGTATTTGCTCATGTAGGCTCCATACGAACAAATTGGTAGAAAGTTAGAAGATGCTCGAAGGCAAATTTTGCAGAAAGGAACTTCAGCCCCTTTTGCCCTTATAATTGATGGCAATGCTCTAACACATGCTCTCATGGGTGGTCTTAAAACCGCATTTCTGGATCTAGCAGTTGATTGTGCGTCTGTTTTATGCTGTCGCATATCCCCGAAACAGAAAGCGCTGGTGAGTAGTAAGCACCAGGTGCTGCTTCATCAATTATTTCTAACAAGATAATGTGGATATATCCACATTTCTATCTTTAAATGCTATTGGCTATTTGGAAGAATTGCAGATTACCAGACTGGTTAAAAATAGGATAAGGAAAACCACACTAGCAATTGGCGATGGAGCAAATGATGTCGGTATGCTACAGGAGGCTGACATTGGGGTTGGAATAAGTGGTGCTGAAGGAATGCAGGTCTGTAGTTTTGCATTCGACGCTTTTTTTGGTCTTCTGTTTTAGGGAAGACAGTATGGGGGAGCATGCTTCTAGAATATATTAGAATAGGTTTAAACTTTACAGATATATAATTAAAAAGACAAATAAAGATTACATTCAATGGCAATATTTCCAATTCAATAGTTGTGCTTAGACAGTACAAACTATATATATTTTTCCTCGTTACAAACTATTACTACCTCTGTTTTGAAATGTATGATGTTGTTGACTTGTGGATATAACATTTGACCATTCATCTTATTAAAAAAAATCGTTTACTCCGTATTTTGTTGCGATAACTTATATTTTTGCATATTTACAATTAATTTTTCATAAGGCGAATGGTTAAATGTCATTTTCAAAAGTCAACAGCGTCATACATTTAAAAACAGCGGTAGTATAAGGTTTATCTGTTTTCTGACGTTTGATTTGCTTTGTATTGCAGGCTGTGATGGCAAGTGACTTTGCAATAGCTCAATTTCGTTTTTTAGAACGGTTACTCCTTGTCCATGGTCATTGGTGTTATCGCCGAATTGCAGCGATGGTAAAGTGCTTCCATCTCTGTTACAATTTTACGGTCTATGAGGTCACTTAAATATTGCAGACATGTTACAGTTTTCCTTTCAATAATTGAAGGTTCCTTGGTTTACATATAGACTTTCCATACAGCATACCTGCTGTAGTGTACAGCATCTTATGCAGTTTCTTATTTTAGAGATTCTGTTATACTTGTTGATATTTTCATCACTATGAAATACTTCCTCCGTTTCACAATGTAAGTCATTCTAAGGTTTATATGTCATAATTAATAGCACTTCCAATCTGACCACTTGATATATTCTGTTTGTGCTATGAACAGATATGCTACTTTTTCTTCAAGAATATCACATTTGGCTTTACACTTTTCTGGTTTGAGGCTCATGCTATGTTCTCAGCCCAACCTGGTTACAACGATTGGTTCATATCTTTCTACAATGTTGCCTTTACATCTCTCCCGGTCATTGCTCTAGGTGTCTTTGATAAAGATGTCTCTTCCCGTGTTTGCCTCGAGGTACATAATCTCCCAGGCTTGTGCAGTCGTAATGTACACCTGGCCTTACTTCAGAGCTGGTTTGGTATTTGTGCTGAGTCCTTGGCATATTTCAGGTCCCTTCATTACATCAAGATGGCGTGAATAATTTATTCTTCAGCTGGTCTCGTATACTCAGTTGGATGCTGAACGGAGTTTGCTGTTCAATAATAATATACTTTGGAGCCCTCCATGCTGTCCTCATTCAAGCTGTCCGACAGGATGGCCACGTTGCTGGATTTGACATCCTTGGAGTGACTATGTATACTTGCGTAGTTTGGACTGTCAACTGCCAACTAGCACTCTACATCAGCTACTTCACCTGGATACAGCATTTCGTCATCTGGGGCAGCATACTGATTTGGTACACTTTTCTGGTCATCTACGGCTCGTTTCCTCCAACAATATCAACCAGCGCATATCATGTTTTCTGGGAAGCTTGCGCTTCTAGCCCTTTATACTGGTTATCCACTCTAGTCATTGTTGTGACAGCCTTGATCCCATACTTCCTCTATAAAATCACACGGTCGCTGTTTTGTCCACAGCATTGTGATCAAGTTCAGAGACCTAACTCAAAAGAATTGGTGGCTCAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028578

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028578&oldid=34835"