BGIOSGA028594

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Revision as of 08:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028594| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028594, complete gene.| tag = P0434E0...")
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Gene Name

BGIOSGA028594

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028594, complete gene.

LocusTag

P0434E03.16-1

Ensembl Transcript ID

BGIOSGA028594-TA

Ensembl Protein ID

BGIOSGA028594-PA

Length

4410

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19480663..19485072

Sequence Coding Region

19480663..19480938,19481031..19481105,19482225..19482353,19482448..19482507,19482996..19483166
,19483321..19483414,19483585..19483676,19483796..19483945,19484132..19484190
,19484943..19485072

Genome Context

<gbrowseImage1> name=IndicaChromosome08:19480663..19485072 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:19480663..19485072 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGGCTGTTCCAGAGGGGGGGGCCTCCCCTCCTGGATGACCGCCGCCGCCGCCCGCGTCGATCTCTCCAGCGCCGGCGGAGGCGGCGGCATACCCGGCTCGGGGGCCTCCTCCTCCTCCTCCTCACAGCCCGGATACTCGGGGCCGCATCAGCAGGCTGGGGTTGCGGGGGCGGCCGCCGACCAGGAGCTCGGGATGGCCGAGCGCGCGCTCTCCGCCGCCGGCGCCGCGTTCGTCTCCGCCATCATCGTCAACCCTCTCGACGTCGCCAAGACGAGATTGCAGGCGCAGGCGGCGGGGGTGCCCTACTACCAGCCGTCGCAGATGGCGTCGCTCGGCCCGGACGCGATATTATCTGATTTCAGATGTTCGCCGTCATGCACACGTGGTGTCATTTTGGGAAGTGAGCCTATTTGCCCACCTGACTGCTTTCAGTACAAGGGAACACTTGATGTATTCTTGAAAGTTGTTAGACAGGAAGGATTTGGTAGATTATGGAGAGGTACAAATGCAGGCTTGGCGTTAGCAGTACCAACTGTTGGAATATATTTGCCTTGCTATGACCTATTTCGCAACTGGATTGAAGATTTTACACAAAGTAATGCTCCTGGTTTGACACCATATGCCCCATTAGTAGCAGGATCAGTCGCACGTTCTTTGGCTTGCATTGCTTGTTCCCCAATTGAGTTGGCAAGGACACGGATGCAGGCATATAAAGAATTTCGTCCTGGAGTAAAGCCTCCTGGAATGTGGAAAACATTGCTTGGCGTTGTTTCACCACTTGCAAGCTCAACTCAGAATGCACAAAATTATCGTGCTCTTTGGACGGGTGTGGGTGCACAACTTGCTCGGGATGTTCCTTTCTCTGCTATATGCTGGTCAACACTGGAGCCGATTCGAAGAAAGCTGCTTGGTATCGTCGGAGAAGAAGGTGATGCAGCTAGTGTGCTGGGTGCAAACTTTGCAGCTGGCTTTGTAGCAGGTAGTCTTGCTGCTGGTGCTACATGCCCTCTAGATGTTGCTAAGACAAGGAGACAAATAGAGAAGGATACGCAAAAGGCAATGAGAATGACCACAAGGCAAACATTAGCTGATATTTGGAGCTCTGGAGGTATGAAAGGCTTGTTCACCGGTGTTGGTCCACGTGTAGCACGAGCTGGCCCATCAGTTGGAATCGTCATTTCTTTCTACGAGGTTGTGAAGTATGCTCTTCATCAAAGGCACATATCATGA</cdnaseq>

Protein Sequence

<aaseq>MVGCSRGGGLPSWMTAAAARVDLSSAGGGGGIPGSGASSSSSSQPGYSGPHQQAGVAGAAADQELGMAERALSAAGAAFVSAIIVNPLDVAKTRLQAQAAGVPYYQPSQMASLGPDAILSDFRCSPSCTRGVILGSEPICPPDCFQYKGTLDVFLKVVRQEGFGRLWRGTNAGLALAVPTVGIYLPCYDLFRNWIEDFTQSNAPGLTPYAPLVAGSVARSLACIACSPIELARTRMQAYKEFRPGVKPPGMWKTLLGVVSPLASSTQNAQNYRALWTGVGAQLARDVPFSAICWSTLEPIRRKLLGIVGEEGDAASVLGANFAAGFVAGSLAAGATCPLDVAKTRRQIEKDTQKAMRMTTRQTLADIWSSGGMKGLFTGVGPRVARAGPSVGIVISFYEVVKYALHQRHIS</aaseq>

Gene Sequence

<dnaseqindica>1..276#369..443#1563..1691#1786..1845#2334..2504#2659..2752#2923..3014#3134..3283#3470..3528#4281..4410#ATGGTGGGCTGTTCCAGAGGGGGGGGCCTCCCCTCCTGGATGACCGCCGCCGCCGCCCGCGTCGATCTCTCCAGCGCCGGCGGAGGCGGCGGCATACCCGGCTCGGGGGCCTCCTCCTCCTCCTCCTCACAGCCCGGATACTCGGGGCCGCATCAGCAGGCTGGGGTTGCGGGGGCGGCCGCCGACCAGGAGCTCGGGATGGCCGAGCGCGCGCTCTCCGCCGCCGGCGCCGCGTTCGTCTCCGCCATCATCGTCAACCCTCTCGACGTCGCCAAGGTCGGGGTCGGGGGGCTTTCGCTTCCGCCGCGTGCACTTGTGTGATTGGTGGCTGAAAGTTTTTTTGTGTTTTTTTTTTTCGTTTGCTGCAGACGAGATTGCAGGCGCAGGCGGCGGGGGTGCCCTACTACCAGCCGTCGCAGATGGCGTCGCTCGGCCCGGACGCGGTAACGAATCTGATGATCTCGATGCGGGTGCCGTGTGGGTGGTTTGCAATTTAGTTGTAGTTAGCCTCCGATTTCATGTGGTGTGGGGGATTCTTGCTTTTTGGGTTTTCGTGATTTCAGGCTAGTACATGATGTTTGTTGTGTGCTTCTACAGTTGACCAGGGTGATACTGTGTGGAATGCAGTTAGTGTTTCTGTCTGTTTTGCCATCTAATTATTAATATTACCCAAGCTGAATGTTGAGGTTCATTAGTTGAATGCAGGGGCATGCTAATCTGCTTGTTGACCCAGAATACCCAGAATTATATATGGTTTAGTACCTTGTTTTGTTGATTTGCATCGTCCTCTAGAGGAGCAAGTAGTCATATTGCTTGATTTCTGTGACGGGCAATCTCTTCTCTAGCCCGAATCAGTCCACGAGTTTGATTTCTTTTTTTTCTGTCATTCAATAACCATTTGAAGATGAGTCCTTTATAGCTCATGAGTGCCTGTGCAACGTGGGGTATAGGGTGCATGATGTTAATTACATTCGTAACATCGTTATGCTAGAGGATGCTTGGGTACTCAATTAGTCACCTGCACTGTATGTTGGTGAGGAAGTTGTGATTATTTTAGCATGTTTAAGGACTGTGTTTCAGTACTAAACTTGGCCACACACTACTGTGGTCAACACCATTTTGTTTAAAGCTTTAGGCAAATAATGTTGATGAATGGTATCAGCTATGGCAAAGATTAATTGTTCTGATCACCTATTTTGATCTTCTTTTCGTACATGCTATCTTCATTTCTGTAGTGCTACTTGCTGTTTTGTTTGATGTTGGCATATGAAGTATTTTCCTGCTTATATTATGCCTCTCAAAGCAAGATTGCTTTTGTGTCTGCTATATTTACCTATGGAGAAAGTATTTATGTAAGATTTGTTGGAACACCATTTTCCAGATCCACAATTCTCATGTTTGTTTGTCACTTTGTTTTATTTTATCATATGCCTATTCTTGTTTTGATCTGTTTTTGCTGATCAACAATCTCATTGCTTTTATGCTAATTGTAGAAGATCTTATTGGTCTTAACTCTTGAGCTTATTTGAAGAATACTGCTTATGTCTTGCAATGCTTTCCAGATATTATCTGATTTCAGATGTTCGCCGTCATGCACACGTGGTGTCATTTTGGGAAGTGAGCCTATTTGCCCACCTGACTGCTTTCAGTACAAGGGAACACTTGATGTATTCTTGAAAGTTGTTAGACAGGTAATGTGACTTTAATTCCTTTTTATAGTTTTATGCAAGTATCGATTTCTAGAGCACAGAGAATTTAACACTTTTGGTTAATTGGTTGTTACAGGAAGGATTTGGTAGATTATGGAGAGGTACAAATGCAGGCTTGGCGTTAGCAGTACCAACTGTGAGTTTTTTTTTTCTCAATGTATTCCATTTTTGTTTATGTTGTATTTGACAAATGTTCTATGATGTATTTTTACATGTGACTAGCATCTGTTGATTAGTTCTGGTCTTTGTGGCAAATACTATGTGAAATAGGCATTGCCTGCACTTCTCTATGTCATTTGGACTTTACTAGTATAGTGCGTTCCACATATTTCTGCTTAGGTTTGTTGTCTTATATTAATCTACCTAAAAAACTCAAGCCACTAGCTTATATGACCATCTTTTTCCCCTGAATAAGGTATACCATGCCATTTCTGAGTTGGGCCTTAATCTTTAGACATATCAACCTGCTAAAATTAGATATATCACCTAATACTCCAGTCTGCACATGAATCTGACGTTATTTCTTCATGTTTTCTTTTTCACACCCTAATTTTTGCCTGTCATGTGACCCTTTAATGTTTGAACTGAATCTTGTCTTTTACTAATGAGTTTGACCATAAACAGGTTGGAATATATTTGCCTTGCTATGACCTATTTCGCAACTGGATTGAAGATTTTACACAAAGTAATGCTCCTGGTTTGACACCATATGCCCCATTAGTAGCAGGATCAGTCGCACGTTCTTTGGCTTGCATTGCTTGTTCCCCAATTGAGTTGGCAAGGACACGGATGCAGGTATATCTCCATTGGAAGTTTCTGGTTATTAGTATTTGTGTTTCTGTGAAACCAATTATGTCTATAATTTTTATTTTTGGGCATACAATTTGACAAATGTAATAATTTCTTTCTCACTTAAAAGCACCTAACAATCACTATTCTATGTTCACAGGCATATAAAGAATTTCGTCCTGGAGTAAAGCCTCCTGGAATGTGGAAAACATTGCTTGGCGTTGTTTCACCACTTGCAAGCTCAACTCAGAATGGTTAGTTTGTTCATTTCAATACATAATGGATTATTCTTGTTCATGTTTATTGCAACCTTGATATTCATAGTAGGATTTGTCAATTTCAAGTATCTATATCTCTGTTCTAACAAATGAAACAGTCTATTAAGGAAATGAATCGTACTATTAATGCATTTATACTGAAACAGCACAAAATTATCGTGCTCTTTGGACGGGTGTGGGTGCACAACTTGCTCGGGATGTTCCTTTCTCTGCTATATGCTGGTCAACACTGGAGCCGGTAAATCCCTGTTCTGTCACTTAGTAGTTATGTTTTTGTTTGCTAATGTGCATGCCAGTATCATTTGCTAAATTCATTTTAAAATTAATGGTATCTTAACTTACTATCATTGTATGCAGATTCGAAGAAAGCTGCTTGGTATCGTCGGAGAAGAAGGTGATGCAGCTAGTGTGCTGGGTGCAAACTTTGCAGCTGGCTTTGTAGCAGGTAGTCTTGCTGCTGGTGCTACATGCCCTCTAGATGTTGCTAAGACAAGGAGACAAATAGAGGTCTGCACATTCTTTCCCACTTCCTTCGTTTTTTTCTGCAATAAATATTCAAAAGAATATTGTTTCTGTTTTAACATCCCAATCACATGCCCCATGGTGCACTATTTATTTAATTTTCTTGCCATTGTGTACATCTTGTTTGTTTCTTTTCTGTTTATACTTCGCATTAATTATATCATTTTTCAGAAGGATACGCAAAAGGCAATGAGAATGACCACAAGGCAAACATTAGCTGATATTTGGAGGTATGTCTTCCACATGCTATGAAAAGGCATTTCATTCCAGCCAAATGAAAATTATTTTCTAGTGGTGCTATAGTGGTATATATTTTCAAACTTGATCTACTTACAAGTCAATGTATTGAGCCTATACGTAAAACTACGTTTTAGCAGACATTTCTGCCTGGGTCACCTTGTTTGAAGAGAATGCAGGTTATCTGAACTGGTCAAAGAGTTAGCAACATGCCTAGCGAGAGCAATCAATGGCTTTCTTCTTAGAAATGGCTGTTGATAGAGAATAACAATTGGACGATTAATGAGATCCTGATTTTATTTTTTTGAAACGAAGAGATCACTGAAACTTTGACTGTTGCATCCATAGGAAAACTAACATAGAACTACACTGGAAAACGAAAGGCTTTTTTTTTTTGGTACAACAAATACATTACTGAAAATAAAAGCAGAAGAGCTAATCCTCACACTGAATACATTGCTGTGACTCTGTGAGATGGCAATGGGTGCTTGAACCAGCTGTGGCCCACCCAAATTATGTTTGTTTTAGCTGGTTTGGCTAATGCCCTAATTTGTTCTAGAAAGCATGTTTTGCTTGTTGCAAAAGAAAGGTGGGTTTGATCAAGTTTAGTGGTTGCTCTCCATTTTAGTTTTATCTTCTAAAATGTAGGTGTAATTTCTTGTATTACATTTTCATTATTTACCCCTGAGAGGTCTTGGCTTGGGGAGTCGATTTCAGTTGGACTGATTTAATTTTAACCTGGCAGCTCTGGAGGTATGAAAGGCTTGTTCACCGGTGTTGGTCCACGTGTAGCACGAGCTGGCCCATCAGTTGGAATCGTCATTTCTTTCTACGAGGTTGTGAAGTATGCTCTTCATCAAAGGCACATATCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028594