BGIOSGA028601

From RiceWiki
Revision as of 08:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028601| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028601, complete gene.| tag = P0434E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028601

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028601, complete gene.

LocusTag

P0434E03.23

Ensembl Transcript ID

BGIOSGA028601-TA

Ensembl Protein ID

BGIOSGA028601-PA

Length

6209

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19570612..19576820

Sequence Coding Region

19570612..19570824,19571325..19571484,19573060..19573260,19573352..19573416,19573601..19573628
,19573704..19573765,19574021..19574107,19574446..19574496,19574800..19575021
,19576280..19576373,19576497..19576637,19576735..19576820

Genome Context

<gbrowseImage1> name=IndicaChromosome08:19570612..19576820 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:19570612..19576820 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGGAAATGGCACCATGTCGCCGCGGCGCTGGCCGTGGCCTGCGCCGCGACGGCGGCCGCCACCGTCGCCGCCGCGGCCGACAGGGGGCTCTGGTCCGCCGCCGCCGCCGCCGTGGCGGAGGAGGGGGAGGAAGCGAGCCACCTGCGCAAGGTGGCCAACTTTTTGTGGCGGAGCGGCGGCGAGAACTCCTACCACCACGTGTGGCCGCCAATGGAATTTGGATGGCAAATTGTGCTGGGGTCATTTGTCGGATTCATTGGAGCGGCGTTTGGGAGTATAGGCGGTGTAGGCGGCGGTGGGTTCTTCGTGCCGATGCTGACCTTGATCATTGGGTTCGACGCAAAGTCATCCGTGGCGATATCAAAATGTATGATAATGGGAGCCGCTGTGTCGACTGTGTACTGCAACCTTAAGCGGAAACACCCAACTTTGGACATGCCAGTGATTGACTATGATCTAGCCCTTCTTATCCAGCCGATGCTCATGCTAGGAATTAGTATCGGTGTCATTTTCAATGTGATATTCCCTGATTGGCTGGTCACAGTTCTCTTGATCATCCTTTTCCTAGGCACTTCAACTAAAGCTTTTCTGAAGGGTATCGAGACATGGAAGAAAGAGACAATAATAAAAAGGGAGGCAGAAAAGCGATCAGAGCAGACAAGTGAAGAACTAGAGTATAGACCAGTTCCTGCATCTGAGTCAAAACCCCCTTCAGATGAAGCGGTATCTATTTTGCATAATGTTTACTGGAAGGAATTTGGACTTCTTGCCTTTGTTTGGATAGCATTCCTCGCACTTCAGGTTACTAAGAATTACATGCCAACTTGCTCCACGTGGTACTGGGTTTTGAACTTATTGCAGATCCCAGTGTCAGTTGGGGTGACCATGTATGAAGGACTAGGATTGATGCAGGGGAGGAGGGTCATATCATCAAATGGAAATGAGCAGACCAACCTAAAATTTCACCAGCTACTTATGTACTGCTTTTTTGGAATAACTGCTGGAATTGTTGCTGGTCTGCTTGGTGTTGGGGGCGGCTCAATCCTAGGACCCATGTTCTTGGACCTTGGTGTCCCTCCACAAGTCGCAAGTGCCACTGCCACCTTCTCAATGATGTTCTCGGCTTCCATGTCTGCTGTTGAATACTACTTCTTGGACCGATTCCCTGTGCCATATGCTCTTTACTTGACCGTTGTGGCATTCTTTTCTGCGATTGTCGGCCAGCGAATGGTAAGGAAGGTGATCAATTGGTTAGGGCGCGCATCGATCATTATCTTCACATTGTCCATCATGATCTTCCTCAGTACAATCCCTCTAGGTGGAATCGGTATCGTGAACTGGATTGGCAAGATTGAGCGACATGAGTACATGGGATTCGAAGACATATGCAAGTTTGATGCATAG</cdnaseq>

Protein Sequence

<aaseq>MGRKWHHVAAALAVACAATAAATVAAAADRGLWSAAAAAVAEEGEEASHLRKVANFLWRSGGENSYHHVWPPMEFGWQIVLGSFVGFIGAAFGSIGGVGGGGFFVPMLTLIIGFDAKSSVAISKCMIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGISIGVIFNVIFPDWLVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTSEELEYRPVPASESKPPSDEAVSILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTWYWVLNLLQIPVSVGVTMYEGLGLMQGRRVISSNGNEQTNLKFHQLLMYCFFGITAGIVAGLLGVGGGSILGPMFLDLGVPPQVASATATFSMMFSASMSAVEYYFLDRFPVPYALYLTVVAFFSAIVGQRMVRKVINWLGRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGFEDICKFDA</aaseq>

Gene Sequence

<dnaseqindica>1..213#714..873#2449..2649#2741..2805#2990..3017#3093..3154#3410..3496#3835..3885#4189..4410#5669..5762#5886..6026#6124..6209#ATGGGGAGGAAATGGCACCATGTCGCCGCGGCGCTGGCCGTGGCCTGCGCCGCGACGGCGGCCGCCACCGTCGCCGCCGCGGCCGACAGGGGGCTCTGGTCCGCCGCCGCCGCCGCCGTGGCGGAGGAGGGGGAGGAAGCGAGCCACCTGCGCAAGGTGGCCAACTTTTTGTGGCGGAGCGGCGGCGAGAACTCCTACCACCACGTGTGGCCGGTAATTAATGGCTACAAAAAAACTCTACTCGATCTTGAGTTGGTTTTGAGTTCTAGGATTAATTAGTCTGTTCTTTTGCCCCAGTTCAATTAGTTCGTTTTTTTTTATTTTCTATTAAAGATTCCCATTTCCTCCCCGTTAGCAGACCTGTGGTGCCGTAGTGTCCGACTGTTTGATTTAGATGTCTGGAATTTTTGGATTTTTTTATTTTTCTATTTTTTTCTTCTGACTCCATTGCTACCAATTAATCCTAGCATTTGGTAGATCATTTATAAACATGCTATCACTTAATAGAGTGATCTTACCTTCAGTTGTAGCCATGCTGAGAACCTTTTTTTACATTATGATAATGAGGCTTACTGAGAACTGCAGATTTAATTTAATTCTTAGAAGAACATTTTGAACCTTCCTCTTCATCTTTCATATGTGAACCAGACGGTGATCTTTTGTATAGATGTGCTGTTAATTTGTTGAATCACACGGACCAATTTGTTTTGCAGCCAATGGAATTTGGATGGCAAATTGTGCTGGGGTCATTTGTCGGATTCATTGGAGCGGCGTTTGGGAGTATAGGCGGTGTAGGCGGCGGTGGGTTCTTCGTGCCGATGCTGACCTTGATCATTGGGTTCGACGCAAAGTCATCCGTGGCGATATCAAAATGTGAGGTTTTGGTCCTTAATTTAAATCAATTACCAGCATTTTTCATCAGTTGCATGGATTATCTGAAAGCAGCACCCCCATATTGTCCTTCGGTTTCACAATCAGCAGTGCTGCGAAAGCAGTAGTATATCTTCTAATAAAAATATAAAATGATGCATTTTGTGCATTAACTAGGTTGCCTTTCCTAAAATTGTTTTTCATTGATTTGGTCATGTGTCTACGGCTTATAAGCCACACCCGAAATAGTAAGCCAAGGAGGGCCAATGCCTGTCCTTTTCTGGTGTTGCTGAACTTGGCCTGTCAAAACAAAATTGAAGTGAAAACATTGAAAAAGAGGAACTTGTGTTCATGTTTACAGAGATGTATCCTGCTACAATAATAATGATGGACCACTGTGATTAATGTGTCTACAGAATGGTTCTATTTAATTTAATTATGTCCTACCTACAGCTTTCAATATGAGTAGGTAGACCACTGTGATTAATGTGTCTACAGAATGGTTCTATTTAATTTAATTATGTCCTACCTACAGCTTTCAATATGAGTAGGTATCCATTCTGAATCACGCATATGAATGCACATGTATCCATTTCATGTTTCGAATCGTTGATTTAATATATATTATCTCTGTTTCACATTTATTCAACACGGTGATATTGTAATTTTCCGTGTTTTTTGCATCACTGGTGGCTCATCATTTACATTTCTGAATTGTACAATTTGCTTTTACCATTTCTGAATTCAGTTTAAAGAATTGTAAAAGTTGAATGAACTCATACTTTCTTGTTTCCAGAATCTTACAGCCTCATCTTTTCGATTATGCTTATGCTTATCAGCCAAAATTTGAATTTTCAACTTTAAATTTGGAATTGATTTTGAGGTTTTCTCATCGAAGTTTATTTTTCAACCTTTGCTTTTAGATCACTAAGAACACGTATATAAAAGTTTTGTTCACAAATTATTTTTCGTTTGCAAATATGTCATTTGGCTTATTCCATCGATAAGCCAAACGATGGGGGCCTTATTTATACATAATTGTCTTACTGGCATTATATTGGACCATACATATGACAAGCACGCCGCATATTTAAGTTGAAATATTCACAAAGCTGCTGGCAATCTATTGTCTTGAAGAATGGTCTACATCTGAAAATAGATGTTTAGAAATAAAAGATTTAGAGAACATTCAAATATCAGTGTGAATTCTAAACATTTTTTTAGAAAATGAATTAAAATCTGGCTTCTACATGGCAGATTGATGTGTAATGCTCCTGCACTAAAAGTGTCAGCTGTAAACAAGTGCAGTTTGGTACTTGGCACTCGTGATAAGCATTTTAGAATTTGTTATGCGAGATAAATCTCTAAGTAACACATCTCTAAGGAGCATTTCAGGTGGAATTCTGTCTGCTCGAATAATAATAAAAAAGGCTTCCAAAATGATCTCATCCTTTATAACATGATGGTATGTTTTCTTTTTTCAGTAATAAATTGAGAGTAGAAAAACCCTGATACTTTTGTTGATGGTTTGTTAGGTTCATGTATCTAATTAATTAAGATATTATGTCTTTCGAGCAGGTATGATAATGGGAGCCGCTGTGTCGACTGTGTACTGCAACCTTAAGCGGAAACACCCAACTTTGGACATGCCAGTGATTGACTATGATCTAGCCCTTCTTATCCAGCCGATGCTCATGCTAGGAATTAGTATCGGTGTCATTTTCAATGTGATATTCCCTGATTGGCTGGTCACAGTTCTCTTGATCATCCTTTTCCTAGGTACTCCCATGCTTCCTGAATCTGCAAACAGTCGATTGATCTGTTTCCTGCTGTTGTTGACTTCAGTTTACATTTCAAAATTAAATTTTAGGCACTTCAACTAAAGCTTTTCTGAAGGGTATCGAGACATGGAAGAAAGAGACAATAATAAAAAGGGTAATGTTCTGAATTTCTGATTCTGTTAACATCCACACATTATCAGTTATCATCCAACATGGCAACATTCCAATCATGAAGCTTCACACCCCTAGGGGCTAGGGTGCACGTTTCAAATTCCTTTCATTCTTTTCATATTACAAATATGCAAATATAATCTTATTTTGGTTCCACTCAATTTCAGGAGGCAGAAAAGCGATCAGAGCAGACAAGTGAGTACGAAACAGAACTACTTTTTCCCCCATGAAATATGTAGATATTTTGCTCATATCTTCGTAATTTATCAGGTGAAGAACTAGAGTATAGACCAGTTCCTGCATCTGAGTCAAAACCCCCTTCAGATGAAGCGGTAATACAAAATGATGAACTTTATCTTCCATTGACTTGGTAACAATCAGTGGTGAACCCAGAACAAAAATTACCGGGGGTCCAATACATAGTAATTATCTAATTATTGACTGATATACTAATTAAAATAATATAATTTAGTTAGAATTGGATAATCTACCCGGAGTCCTGTGACCCCGGGTAGTTCAACGTGGGAGCGCCACTGGTAACAATCATATGAAGCTCTTATAAGATTAAAGCTTGCCTGATACTGCAGGTATCTATTTTGCATAATGTTTACTGGAAGGAATTTGGACTTCTTGCCTTTGTTTGGATAGCATTCCTCGCACTTCAGGTTACTAAGGTGAGAACCTCAAGTTCAAGTTTGATTGGTGACATGATCAATACTAGGAGCATATATTTAAATTTTCAGTTTGCCCTGATCAGCTTGTTTCTGTAAATATGGATACTTCAATTCTTCCTACCTTGTTAGTTACCAAATCTATCATGTAAAAGTTCTTCCTACCTTGCGATGATCATCTTGTTGACTTGTGTGCTCCCCATACAAAATTAGCATAAACTTTTTTTTTTCTCGAACAAACCTTATATGAATTTCAACTTTTGTAAATATACTGCACAGAACCCAGAAACAGATATACTGCAACATTGAGTCATGCAGCTTTGTTATTTTCATGTTTGCAGAATTACATGCCAACTTGCTCCACGTGGTACTGGGTTTTGAACTTATTGCAGGTATTTTTTTTTAATGTCTTACCTCAAATTTCAACCATAAACTCATAGCTGATGTAGTTTCATGCAAATATTTGTCAGAATAGAAGATATACAACTTGATATTTAAGAACAATCATCATGGTCCATTCCTACAACTTGTCATTGTTTTCTCAGTAGTCTTTCATTAGAACATACCTACATTCGCTTTATATACCATCCAGGCTATAATGTACTTCTTACTACTTGTTCTAATGTCATAAATAATCATAGCATATGTAATGTCCAACTAATTGTTCTAATGTCCTTTTCCTTTTATAAATGCAGATCCCAGTGTCAGTTGGGGTGACCATGTATGAAGGACTAGGATTGATGCAGGGGAGGAGGGTCATATCATCAAATGGAAATGAGCAGACCAACCTAAAATTTCACCAGCTACTTATGTACTGCTTTTTTGGAATAACTGCTGGAATTGTTGCTGGTCTGCTTGGTGTTGGGGGCGGCTCAATCCTAGGACCCATGTTCTTGGACCTTGGTGTCCCTCCACAAGTAACCTATCATGCCTGATTTTCCTTGTTAAAGAATTAGTAGAAACCTAATTGCAAAAAGTGGTCTCCGCCTTAATGTTAGCCGTGCCATACATCTCATTTTGATCCCTTCCTTTGAAAACATTTCTCCAGACCCACAAATTCCAAAATTCCTGGGACCTCTGATACCAACATCCTTTTGAGATTACCTCCAATCTCGTGCCCACAAATCCATACATAATGCGACCCCCTTCAGACACCATTCCTCCATAAATTCCTCTCCAAATTCCCTATAATCACCACAAATTTGTATCTGGAATTTGAGTTGAGTCCCCATTCCAACTTCCCCCTTCAAAATTTCTTTATTCCATTCCCGCCACAAAAATTGAAGATAAATGTTGGAACTTGTTTTAATTCCTTTCCTTCATTATTTTCTGAAGAACTCCATTGAAATCCCCTCTTTGGATATATGATTCAGATCTACTTATACCCAAAAATTCAATTTTGTTCAAATATTTTGTGAAATCCCCAAAGTTCTTTCAAATTTGAATCTCACATTTAAATTCGGAACCTATGAAATTTCATTCAAAATTTCATCTCCACAAGGTTCCTCTTGAAATTTCAAATTTCAAACTTTAGGTCCAAATAATCGAAAATCTCCTGAGATACCTTCCTAGAATCAATTGTCAAATTTGAATTCAACTTCCGAGTTCCCTTCCTTTCCTCCCAACAAATAATCATATATCTAAACTACAAAATTCAAATCCCATAAAAAATATAAAAATTCCGACTCCAAATTCTGCCCTTCAATTGCTAACAATTTATCAATTTCAAACTTCTGATTTGATTCAAAACTCAATCAACACATTCAAATAATATTCCTATTCAATTCCCTGGAAATTCCTAAGAAATATTGTGCAACTGGGCCTTGCTCTCCCCTTTTCTTCGCCATCTTGGTCTGGCCCACACTCTTCCTCGTCTTCTGTTTCCCTGAAGCAGGCAGGTGTTGCCTAGCTCTGCTGAGCTCCCCTCCATTACTCCTCTCCTTCATAGCAGCCCACACCACGTCCCACTTCTGTTGGATGCACGTCATGGCAATTTTGCATTTTATGGTTGTACATTGAACAAGATTAAGGGGGGTCAATATGTATTTTTCAAAGTTTAAGTATGGTCAATGCATTTTACTGCTTTTAAAAAAATAAGTTTAGTACTTCTTGTTTTATAACTGTTGAATTTTGTTCGCCCATTTATTTTCGCCTCTCTAACTGAAACTATCATAGGTCGCAAGTGCCACTGCCACCTTCTCAATGATGTTCTCGGCTTCCATGTCTGCTGTTGAATACTACTTCTTGGACCGATTCCCTGTGCCATATGGTAAAAACTCTTCCCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCTCACCCATATGATCCCAACTACCTGTCATTTAATCTTTCAAACATTTGCAGCTCTTTACTTGACCGTTGTGGCATTCTTTTCTGCGATTGTCGGCCAGCGAATGGTAAGGAAGGTGATCAATTGGTTAGGGCGCGCATCGATCATTATCTTCACATTGTCCATCATGATCTTCCTCAGTACAATCCCTCTAGGTACTTTATTTTCTCCTCCTCGCCCCTCACCGCAGATGATCATATTCGACGATTTCAACACATATATCATCATCATACAACCTTGTGTAATCCGTAGGTGGAATCGGTATCGTGAACTGGATTGGCAAGATTGAGCGACATGAGTACATGGGATTCGAAGACATATGCAAGTTTGATGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028601

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028601&oldid=34858"