BGIOSGA028603

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Revision as of 08:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028603| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028603, complete gene.| tag = P0473F0...")
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Gene Name

BGIOSGA028603

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028603, complete gene.

LocusTag

P0473F05.10

Ensembl Transcript ID

BGIOSGA028603-TA

Ensembl Protein ID

BGIOSGA028603-PA

Length

9041

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19616515..19625555

Sequence Coding Region

19616515..19616993,19617307..19617442,19624215..19624336,19624664..19624733,19624824..19624973
,19625069..19625204,19625293..19625389,19625486..19625555

Genome Context

<gbrowseImage1> name=IndicaChromosome08:19616515..19625555 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:19616515..19625555 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTCCTCCGCGCCGCCGCCGCCGCCGACCTCGTCCGCCGCCACCGCCGTGTCCCGCATGCTAGTCTGATCCTCCACCCCGCCCTCTTGCCGCCGCCGCCGCCACCAAGCATGGAGTCCTTCCCCGACGGTCCCAGTACTCCTGGCCCCGTCGCCCAAAACGACATCTTCGCCGCCACACCATGCCACCGCCACCGTCATCGCCGGTGGCCGCGTCCGCTAATTCCAATCTCCTCTTCTTCCTATGATAGCAGTGGGGCTCGGCTTCCCGCCACCGTGTCGTTGTACTCGCACCTCTCCAGCACCAGCTGGGGCGCCGGTGGGGATTCCACACCTCCGCACCAGTCGCCACCAGCGCCGCCACCTCCTTCGCCGTGGGTGGACAGGTGGGTCCCACTGGCGGCACGGCCATATGCCATGCTCGCCCGCATCGACAAGCCCGTTGGCACCTGGCTCCTTGCGTGGCCCAGCTTCTGGTCAATCGCGATGGCAGCGATGCCAGGGGAGCTGCCGGACATGAGGATGCTGGCGCTGTTCGCGTGTGGATCCGTGCTCATCAGAGGCGCCGGATGCACAATCAACGATCTTCTTGATCGAGATATTGATAGAAAGGTTGAGCGTACCAAAAGCAGGCCTCTTGCATCAGGTATTCTAACACCTACGCAAGGAGTGGGTTTCCTCGGATTCCAGCTTTTACTGGGATTACCAATTCTTCTCCAACTAAATAACTTAAGCCAAATACTTGGGGTATTTTCACTTCTTTTGGTCTTCTCTTATCCCCTGATGAAGAGGTTCACATATTGGCCTCAGGCATATCTTGGCTTGGTATTCAACTGGGGAGCTTTGATAGGATGGGCTGCCATGAAAGGAACCATAGATCCAGCCATCATCCTTCCGCTGTATACAGCTGGTATATGCTGGACACTGGTGTATGATACCATATATGCACATCAGGATAAAGAAGATGACGTCAAAATAGGAGTCAAGTCCACAGCATTAAGGTTTGGAGATTCAACCAAGCCATGGATCAGTGGATTTGGTGCTGCATGCATTGCCAATTTAGCACTCAGTGGCTATAATGCTGACCTTGCATGGCCTTACTACCCTTTTCTGGCAACTGCATCTGCGCACTTAGCATGGCAAGTTTCAACTGTTGATTTATCTGACCGCCTAGATTGCAACAGGAAATTTGTGTCCAATAAGTGGTTTGGAGCTTTGATATTTGGTGGAATTCTATGTGGACGACTTGTATCATGA</cdnaseq>

Protein Sequence

<aaseq>MAFLRAAAAADLVRRHRRVPHASLILHPALLPPPPPPSMESFPDGPSTPGPVAQNDIFAATPCHRHRHRRWPRPLIPISSSSYDSSGARLPATVSLYSHLSSTSWGAGGDSTPPHQSPPAPPPPSPWVDRWVPLAARPYAMLARIDKPVGTWLLAWPSFWSIAMAAMPGELPDMRMLALFACGSVLIRGAGCTINDLLDRDIDRKVERTKSRPLASGILTPTQGVGFLGFQLLLGLPILLQLNNLSQILGVFSLLLVFSYPLMKRFTYWPQAYLGLVFNWGALIGWAAMKGTIDPAIILPLYTAGICWTLVYDTIYAHQDKEDDVKIGVKSTALRFGDSTKPWISGFGAACIANLALSGYNADLAWPYYPFLATASAHLAWQVSTVDLSDRLDCNRKFVSNKWFGALIFGGILCGRLVS</aaseq>

Gene Sequence

<dnaseqindica>1..479#793..928#7701..7822#8150..8219#8310..8459#8555..8690#8779..8875#8972..9041#ATGGCGTTCCTCCGCGCCGCCGCCGCCGCCGACCTCGTCCGCCGCCACCGCCGTGTCCCGCATGCTAGTCTGATCCTCCACCCCGCCCTCTTGCCGCCGCCGCCGCCACCAAGCATGGAGTCCTTCCCCGACGGTCCCAGTACTCCTGGCCCCGTCGCCCAAAACGACATCTTCGCCGCCACACCATGCCACCGCCACCGTCATCGCCGGTGGCCGCGTCCGCTAATTCCAATCTCCTCTTCTTCCTATGATAGCAGTGGGGCTCGGCTTCCCGCCACCGTGTCGTTGTACTCGCACCTCTCCAGCACCAGCTGGGGCGCCGGTGGGGATTCCACACCTCCGCACCAGTCGCCACCAGCGCCGCCACCTCCTTCGCCGTGGGTGGACAGGTGGGTCCCACTGGCGGCACGGCCATATGCCATGCTCGCCCGCATCGACAAGCCCGTTGGCACCTGGCTCCTTGCGTGGCCCAGCTTCTGGTACTATACTACTGTACCTCCTTAAGCCGTTTTTATTTTTTTATAAATCAATTTTTTTTAAGTTTGAATAAATTTATAAAGTATAGTAAATTAGTCTAACTAAATATAACACGCTGAATATGTTTTCATGTAAATGTTGATATGTTTGTTTATAAATTTATTCAAACATAAAATGGTTTAATTTAGAAAAAAAAATTAAACGACTTATAATACAAAATAGAGTGGGTACTGTTGCTACAGCTACCAGCTAGGCACCATTGTACGCTAGTTTGTTTCGGATTTGAAGCGAGGCTGCACACTGTTTCCTTGGTAGGTCAATCGCGATGGCAGCGATGCCAGGGGAGCTGCCGGACATGAGGATGCTGGCGCTGTTCGCGTGTGGATCCGTGCTCATCAGAGGCGCCGGATGCACAATCAACGATCTTCTTGATCGAGATATTGATAGAAAGGTGATTAATTTGTGGTCATCTCTGTCCATTAATTTTTCTTCCACTTTGTCTTTCAATGAAGAAAAAAAGGCTTTTAAGTTCTTGCAAATAGTGAAGCTGAAAGGCCAAACTGTGCCGACAGCATGGTTCGAAATTTCGGACCCTACCCACAAGCACAAATCTCCCTCAAATTTTTCAGATTTTTTTCATTTTTTTGTGATTTTAGTCAAAATTTGTTCAAATTCAATCAAAATATATTAAAATTTCAAATAATTTTGGTTAAAAAGCCACCAAAGTTTAAGAAATTTACAAAAAATTTGTCAAAACCCTGGCTGACAATGATACCAAGAAATCTTTGTGGCTTACAATAATAACATGCAGTGATATTATTACTGGCTTATTATGAACACTCAATAAAAGCATTACCGTTGTGTGTTCGACGTGAACCGATAATAATAAACCTATCCTACTTCGACGTAAACCGACAGTAATAAATCGATCTGTAACCTACTGTATGGAAATGATACCTTAGAGATGATTATATTAAACAATATATATATACATGTGATCTCAACTATGATATTGAGGATATAGGGTTCGGCTAGTACGAAAGGTGCGCATGTATCCTATACATATTCTAACTCTGTCGTGGGTGATAGTTCTACTCATGTTTATATGTATTGATGAGGGTGTATCACACCGGCTAGAATATGTTGATCAAGTAAGTTACATCTATCTGACTAAACTAATCTTAACGGAATATGCAAGTAATAGCTAGGTTCTTCCATTGGCGCATGCTCAATGTGGTGTTGGCTTGTACAACTTATGATGAAATGTCCTCCTCCAATGGGAGACATTGTATTTATATCGAAGTACGATTTCCTCGTCCAAATAGAAATTAGGAAGTCCAAACAAGATAACCCGCTATGCTCTTATTATCCTTAAGTCAGATTAAGGAATTTTTCCTTAGTCTTGTTCGATTAATCATACTTAGAAGTGGATTAAGGAGTATTTGGAGGGGAATAATCACTGATGGAGAAAGGGTTTTTACTCCCGGTTCGTAACCCTCTGTAGTCCCGGTTTTCCAACCGGGCTGATCCGGTTGCTACTTTATTCTTTTCTTTTCTTTATTGTTTTTAATATATTGATTTTACTCTATCCCATCCCCAAAATCCTAAATCAATCATCCCCGAATCACCTCCAAATCCTCAAATCGATAAAATTCATCACAAATACATCACACACAAATCAAATACATCACATATTCACATCACACACAAATCTCAGATCCGAATCACAAATTCTAAAAAAAAAGAAAGAAAAAACGAACAGCCACCGGCGCTACACCCGCTGCCACGCCGGGCGCTCCGCCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACACCGGCCTGAGTACTGTAGATCCGCCGCTGATCTTGACGGTAGATTGTTGTAGCCCACTAATTCCCGGCACCGAGCAACGAGGCTACCAGATGCATCAATAGGACGAGCCTATGTAACACCAGCTATTAAGCTACACTTGTGGTCTTCGTCTTCAAAATAATCTGCTTGCTAAAGGTGTTAAGGATGGTGTAGATTTAATGCTGAGTATGGTAGAATGGGTGGCTTTGCTTCGCCAAACCCGGTTACGATACGTTGTTATTATGTCGGTGTATAGAACAGGTGGCACGATGAATGGGATGACTTTTGCCTTTGTCTGTGCCCAGTCGTTTATTTCGACCTTCATCGGATATGGATTTGTGGTTGCTTTTGCGTCGTCGGTGCCCAACAACTGCGCCTCAATTCTATTTGTTTGGACGTATTACCAATGTAGCGTCATAACCTTGATGGCGCTCGGCCATAATTTTGTCTAACAATAGACGCATGTGGTGGCCATAGCTTTGTCAACTTTAGCCAATGCATCATCCAGCCTTCTTGGCAGTGCGAGCTCTCCGGTCGGGGTGTGAATGGGAGGAACTCTTCGATTGGTTGCACTCTTGGGGAGGAGTTGCTGGCTGCGCCGCAAGTGGGGGTAGGAGCTTGTCGACCGGCTGCGGCATGCGTGGGGGAGGGGCTCGCCAGCCTGCTGCACTCGGGAAGAGGAGTAGCCAGTTGTGGCGCGAGCAAGGGAGGAGCTCACCAGCCGTGGTTGCCAAGTTGGTGTTGTCTCCCTATCATCTCTGTTGCCACCACTGCTCGAGCTCGAGCTCTGAGCCCTCTACCGAGCCGCCGCTACCTAATTTGCTCAGCATTGGTTGTTGTTGGGCGCACCCACCACTTTCGAGGACAATGATCATGACCGCTGCTTCCTTGGCTTGTGTAACTCGAGCTTGGTGGCGGGACGACGCAGATTGAGCTCGGCGACACCGTCGCTTGTGCCCCTCGAGAGAGAGAAGATAAAAGCGAAGAAGAGAGGTGGTGCCCCATACGACTGTAGGAAAAGACCAAAAGGCACCCCACCCCTTTTTAAGTTGGCCAAGGGAGAAACTCTCATTTAGTAATACTTTCAAAAATAAAAACGCTATGTTTATAAAACTCTATACGATTTTCATCTTACTCTTAACTATTTTTCTTCACAAAACAAGTTTTTACTCTCAGCTGACTTTGGGTTTTTCTTAAACTTAGATGGCAGATCAGGATTCACCCGCTACCTGGGAGATGGGCGTACCCCGCTCAGAGGGATACGTCATTGAGCTGCATCGGTTGATGAGGCGTCTACGGTACCCCAGATTTCCGATCTACCGAGTGAGACAGTGTGGATCCGTTTGGGAGGCCCGGGTCGAGGTTCACACGAGTCCCTTCAGAGTCAGACTACAGCTTCCCGACACGCCACCGTCGCGACTTGCTAGAGACCGCGATGCAGGATGCAGCCCGGGAGGCCTTCCTCCGACTTAGCTCTATCCACCGAGCTGAGTTGGCGAGTACTGAGTTTGCTCACCACCCGTTTCGAGAGGAGAGCAACTCCATCTGCGCAGTTCAGGACACATCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGATGGTTTCTCCACCAGTGAATTCCACACCTATTAAGTTGTGGAATCAATCCCCGCTCAAATCCTCAATCCCCTCTAATCCCTTTTTCATATGGAATAATCGAGCAAGGTCTTATTGGGATGAGATCTCTTACTTTCCTGTATAGTTATCCATATCAAGGTATTCATAGTTTTGGGTGTGAGATATTCCTGGTGAGTGTATAAGTATCGGGTATCCCAAATATACTACACTAATAAGATAAGACCAAACTCCTTGACTTTGTACTGCTATACACATCTAGTTCATATCTCTGTGAATGCTGATCAATATCATAGATCACAATGATCAGGCCACGCTGTTCGGATCTTGTATTCGTGTCATGAGATCAACTTTTCGGTTAGGCCTCGTGCTGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCATTTTGCCCGTGTAAAGGGGAAAATTTTTCTTCATTCTTTTTCACTGGTGCATAAAAAGATAAAAAAAAAAATGAAACTGGTGTAGCAACACTTTGCTTTCCTTTTGCTCTTTTTACTAGCGCGTGTAAAGGTGAAAAAAATTGGAACCAGAAATTAAGCTCGGTGTAGAACCATTTCATACTTGCTTGTAATCTGTTGTCTTGATTTTAAAAAAACATAGCGGTGGACTGGTGGTTCATGGTCTATCTCTCGTAAGCCTCTATCCCTTTTCATTTCCAGAATACCATGCATATCGTCTCGAAAAATTCAAAAAAAGAAAACAACTCATTTTCCTTTTTCTTTTTCTTATGTGTAATGCGTCTTTGCTATTTGGGATTTGCTAAATATCATGTGACAGAAAATTGGTATAGCAATTTTTGAATTTTGGGACACTAGATGGTCTTTAAGATTCGTGCACGGGAAAGAGATAAAAATAGTCCCGCGCTTGGCGGAGGATTGAACCCTCAATGCTCATGTTGCGCTCGAGCAAAGCTACCCATTATGCTAGCACATGTTACTTATTTGTTAGCAAAGCACAAATTATAAATCACTTATATTATTGTTACAAAGTTATATCGTAATTACCCCACTATTATAATAAGTTTTCTTAAAAAAAAGCTATAGAAAGTTATATATATAGCTAGTCCAGCTTATTTTTAAAACAAGTGCAGGGTTTATGGTCTGATGCCCCCTCTTCTTTTCCTTTCACGAATCCTACACGCATGGTCTTCACAATTTTAGAAAAAACAGCTGCTAACATAAAAAAAATTACTGCTTGTGAACTCGCTGCGCTACACCATCCTTTTCCCTATTTTCCATCTCGTTGTTTGCGATGACTATATTCAAGGAATTTCCCTTTTGCTCTAATGATATTATATTTTTTCTCGTGGGGCCAAAGACAAGCGCATTGACTTTCGAATTGTTGTTTGCGATGACTATATTCAAGGAATTTCTCTTTTGCTCTAATGATATTATATTTTTTCTCGTGGGACCAAAGACAAGCACATTGACTTTCGAATTATTGTCCTCGGATGCTACAAGACTCGCCCATGTACTTCGAGTTTAATAGCATGTCATAGAAAGTTTTTAGAGCATTACTAACAGTCTATTTATTCCATCCCCAATTCTATTTTTTTTGGGATTTTGGTTAAAAAAACTGGTCCAACAGATTCCCAAAAGAGCTATGGACGTTTTGGAGTTCTCATCTCCAATTTTCTCGGTACGTGTATTTGAGGGTGAGAGAACGACTCCCAATCCCCTCCTTTCCGCGCGTTTCTGCCCTCCTTCCGCGTTTCTCCTCTCCTTCCCGCGTTGGGGCGATCTCCTTCTGCGCACGGGAAAGGAAAAAAAACTAGAATTTATGTTGGTAGTTTAACAGAAGGGCTCACTTTTAGTTTTTGGGGATTGAATTTAGGCTATCTCTTGGAGGAAGGGGTTTTTCACCACCTATTTTCAGTTTAGGAAACCCAAAAATTAAATTTTGGAGATAGGTTATTGATAGACTGTTCGTGATGCTCTTATATTGGTAGAACAATATTTTTATCTTTTTCCCCTTAACTAAGGATGCGATTGTTAAAAGAGAAAAAGGACTCTGGCAGTAAAAGTAAAAAAAAGGGACTCTGGTAGTAAAAGGGAAACAAACTTTTTATATTGATAGAACAATATTTTTTTTCTTTTTCCCTTCACTAAGGATGTGATTGTTAAAAGAGAAAAAGGACTCTGGTAGTAAAAGTTTTAAAAAAAGGGGACTCTGGTAGTAAAAGGGAAAAAAAACGTATGTATGGATTGGCTCAGCATTGCACCATGTTTTCATCCTAAGATCGGAGAGAATGCGCAGGACCCTCAGCGCAGGTGCTTCTCGTCATCGCCTCCCGACGATGCAAGCTCGTATGGACTATATAAAACGTCTGAAGCAATATAATCGAGCGGTATGGTACAAAACTTGAGAGGAGAGGCTAGCGGGCCTACCTTAGTCCATAACTACAAACGCAATGGGGGCCTGGTGGCTGCGTCGCTGGTTCAAATCGAGCCCAACTCTGCACAAGACGACGCTCACCCATAGGCCCAAGACGAGCCCAACTCTGCTTCTGGTAGTTTCCTACTACTACACTGCTGGTAGGGATGAAAACGTCGGGAAGCCGTCTCAACCATTTTCATAACGGAGTTGCTAGAAATATGGCGCCATATGCTATAGTCGATTTTTTTTCAGCCACTTACACAGTAGTTACACCTCATTTACACGCCACTTACATATGTAATTAGTATGCAATTTTTGAATTTACATATGTGATTTTAGTACTTACATATGTAATTTTGAGACTTACATTGTAAATACACTAAAATTACATATGTAATTTATGGACTTACAATGTAAATACATGCCGACTATTTTTTAATGAAAAATATGGCGCCATAAATATAGCTACACTCTTTTCATAATCATATTTTTCTTATAAATAAAGCCAAAAATAGTAAATTTAGAAATAAAACCAATATTGAAAATATCGAAAAACTGGAAATAGAACTATACGGACAGAAAAATATTAGCGATCGGAAACTTGTAATAAATGTCAGAAACATTTAACTACAAAATATCACATTTAACTTTACTTAACTATATAATATGATGAAATAAGTAGTTATAGATTATCTTCATTTTAACCTTGTGTTCAAGTTAGTGATTTGGTTGAGGAGTTGATGGGTCTCTAAACTATGGATGAAATACATAAATGGACCATAAATATTGGCGTATTTAGAAATACCATGATTACCATAAGAATACAGTAATATTCGGAAATGGTCGGTATAATCGTTTCTGTTTCTGTTCTCATATTTTTCACCATTTTCATTTTTGTTTCTTGTTAACCATTTTCATATTGCTTGACCTAGCCGTAAAAATCGAAAACGAACCATCGACTGGTTGGGAATTTCCATGGCCACTTTTACTCCTTCAGTCACAATTCCCGAGCAAAACTGCATTACTAGTAGTATTACTGTAGTAGTGGCACTACTGCAAGTCTGCAAATCTGCTCCTCTGATTTGGAGTTCAGAGAGGCTGAAACCTGCTCGGATCGATCAAATGCCATCATGATATCGCCAGTTGCTTGAAGAACAGTGTAGGGAAGTAGTCAACCAGCAACATAAAATAAATTTACCCATTGATGAGATTTAACGCTTGGATCTTTGATATGAGGGTCATTTTTGTATTGTTCTTTTCTTGTAGGTTGAGCGTACCAAAAGCAGGCCTCTTGCATCAGGTATTCTAACACCTACGCAAGGAGTGGGTTTCCTCGGATTCCAGCTTTTACTGGGATTACCAATTCTTCTCCAACTAAATAACTTAAGGTACATTTGGCCTTGTTTGACTGAAATTGATGCAGTTAATTTGCATGTTTTAAATGTATATAGTATAGCATTGCACTGTTTTGTGCAGAAAAGAACAATGAGATATTCGGTTATTTTGGTAGAATTCTTTGCCTTTTAAGTTTGGAATGCAAAAATTGAATATGTTTAAGTCAATTTTACTTTTGTGCTGTGTTTTCTCCTTCTTAATAAAATGACACTCGGCTCGACGGCTCTCATGCGTTGTTTGGGGAAAAGAACACTTCACAAAACTCAAAGGGTCTTTACATTACTATTCACCTCTATCTTCTATGATATTTGTTTGTGCAGCCAAATACTTGGGGTATTTTCACTTCTTTTGGTCTTCTCTTATCCCCTGATGAAGAGGTTCACATATTGGGTATGCACTAATTAATTAAGCATGTGGATTCTTAATAATGTGAACTTATTTACCGAGGATGATCCAACAATTTCAATGCATTTGTTACAGCCTCAGGCATATCTTGGCTTGGTATTCAACTGGGGAGCTTTGATAGGATGGGCTGCCATGAAAGGAACCATAGATCCAGCCATCATCCTTCCGCTGTATACAGCTGGTATATGCTGGACACTGGTGTATGATACCATATATGCACATCAGGTGACTTACTAATGGCATTATTTTTTTTTCATATTTGATCTTAGTGATGCCATCTTTGTGGATGTTTGCTAATTTCTTATCCAACTATTTGATAGGATAAAGAAGATGACGTCAAAATAGGAGTCAAGTCCACAGCATTAAGGTTTGGAGATTCAACCAAGCCATGGATCAGTGGATTTGGTGCTGCATGCATTGCCAATTTAGCACTCAGTGGCTATAATGCTGACCTTGGTTAGTGAACATTATCAGAATGTCTTGTTTAGTGAAATATTTGTTGGTATGCAAGATATTGACTGCGGACTTTCCTCACATTGGACAGCATGGCCTTACTACCCTTTTCTGGCAACTGCATCTGCGCACTTAGCATGGCAAGTTTCAACTGTTGATTTATCTGACCGCCTAGATTGCAACAGGAAGTAAGTTGTTCCTTAATTTACATGAAACAGAAGAAATCAGTTAATCTTGTTATCTATGAGATTATTAACTTTCTTAGCTGAAATGGTTCTCTGCAGATTTGTGTCCAATAAGTGGTTTGGAGCTTTGATATTTGGTGGAATTCTATGTGGACGACTTGTATCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028603