BGIOSGA028618

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Revision as of 08:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028618| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028618, complete gene.| tag = OS08G03...")
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Gene Name

BGIOSGA028618

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028618, complete gene.

LocusTag

OS08G0398300

Ensembl Transcript ID

BGIOSGA028618-TA

Ensembl Protein ID

BGIOSGA028618-PA

Length

5107

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20188115..20193221

Sequence Coding Region

20188115..20188213,20188320..20188704,20188814..20188896,20189001..20189145,20189858..20189986
,20190082..20190206,20190296..20190454,20190538..20190700,20190785..20190910
,20190983..20191066,20191145..20191506,20191607..20191807,20191908..20192017
,20192114..20192198,20192333..20192461,20192540..20192645,20192725..20192813
,20192922..20193221

Genome Context

<gbrowseImage1> name=IndicaChromosome08:20188115..20193221 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:20188115..20193221 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGACACCTCCTCCTCCTCCTCCTCGTCGTCGAGGGGCGCCGCCGGATTCGCCACGCAGGCCAATGCCCTCCTCCGCAAGAACCTCTGCTTCCAGAGGAGGAACATGAAGACGAACGCGTGCATCACGGTGTTCCCGGTGTTCCTGTGCGTGATCCTCGTCGTGCTCCAGGGGGTGCTCAACCACGAGCTCAACAAGCCCAAGTACCAGTGCGGCTGCGCCTGCGTGGACGCCGCGCCGGACGGGACCTGCCGGAGGACGGAGTGCGGCGTCGAGCACTCGACGCTGGACCAGGTGGGGAGCTGCCCGATTCAGAGCCCGACGCCATGGCCGGCCTTGGTCCAGGTCCCCCGCCCCGAGTCCCGGGCCGTCAGGATCGCCTCCCAGCCGTTCGACGGTTTGCCTGACCCGACCTGCAGGGGCACAGGGTCTTGCCCTGCCTCTGTCCTCGTCACCGGAATGAACCGCTCGCTTGCTCAAAGTCTTTCGGGTGGACTGTTCCCTGCTGTGCCTCCCTCTCTGAATTTCACGGATTATCTTGACACGTTCTCCAAGATTGTTGCTGGGTCAGACACATGGACATGGACAACGCAGTTCATAGAGCCGGTATTTACCCCAGGGCATTCTTTATATGTGGTCCAGCCTCAGTGTTCGTCCAATTTATCACGAACAATTTCTAACAAAGCTGGACCTGTACCCATTCAACTCAATATAGACTGCGTTCAAGGCTTATCATTATGGCGTGAAAGTGCATCACAAATCAATAATGAACTATTTAGAGGTTATAGACAGCAAGGTGGAGGAGGTGGAGAAGGAAAGACAAATGAATTTATTGCAGGCTATGATTTTCTGAACACAAACAACAATGGTCTTGAAATAAACATTTGGTACAACTCTACATATAACAACAACACTGCATATGACGTCATCTCATTGCTACGAGTTCCACGCTTGGTTAACACGGCATCCAATGCATACATGAAATTTCTTAAAGGAAGTGGAGTGGAGATGCTGCTTGAATACGTTAAAGATATGCCAAAAGTAGGAACCAAACCAAAATTTGATCTCTCTTCTCTTCTTGGTGCTCTGTTCTTCACCTGGATCATTGAACTACTTTTTCCAGTTATCTTAACATATCTCGTGTACGAGAAGCAACAGAAGCTGAAAATTATGATGAAGATGCACGGCTTGAAGGATGAGCCTTACTGGATGATATCATATTCTTACTTCTTTGCTCTATCAGCTGTCTATATGATAGTGTTTGTGGTATTTGGATCCTTGATAGGTTTAAATTTCTTTAAAACAAATAACTACGGCATTCAGTTTGTTTTCTACTTCATCTACATAAATCTTCAGATCGCACTTGCATTTTTCGTTGCAGCCTTCTTTTCTTCTGTAAAAACAGCCACAGTGGTTGGTTATATATATGTATTTGGTTCTGGCTTACTAGGGGCATTTCTTCTGAGGTTTTTTGTGGAGTCTACTAGTTTTCCGAAGGGTTGGATAGTAGTCATGGAAATCATCCCTGGATTTTCTCTGTACCGAGGGTTATATGAGCTTGGTCAATATGCATTCTCTGGAAATGCAATGGGAACAAATGGTATGGAGTGGACTAATCTGCGCGACTCTGAGAATGGAATGCGCAATGTCTTGATTATCATGGTTGTCGAATGGGCTATACTACTCCCATTAGCATTTTATTTGGATAAAATCTCATCATTGGGTAGTGGAGCACGTAAAACACCCATGTTCTTCTTGAAACGTTTCAAAAATCGTGCTGTATCACTGCGGAGGAGCTTTGGGAGACAAGGGTCTAAAGTAGTTGTTGAAATGGACAACCCTGATGTTTCCCAAGAAAGAGAGGTAGTCGAGCAACTTCTGCTGGAACCAAATGCAAGCCAAGCAATCATATGCGACAACCTGAAGAAGGTTTACCATGGAAAGGATGGAAACCCGGACAAACTTGCAGTTCGAGGGTTGTCTCTTGCCCTCCCTAAAGGCCAATGTTTTGGTATGCTTGGCCCGAATGGAGCAGGGAAAACATCATTTATCAGCATGATGATTGGGCTCATTCCACCCACATCTGGCACAGCATTAGTCCATGGGATGGACATAAACACTGATATGGATAGCATCTACACAAATATGGGTGTATGCCCACAACACGACCTACTTTGGGAAACATTGACTGGAAAAGAGCATCTATTGTTTTATGGGAGATTAAAGAATCTTAAAGGCGCTGAATTAGAGAAGGCAGTTGATGACTCCCTGAAGAATGTTAACCTGTTTCACGGTGGTGTTGGAAATAAGCAAGTGGGGAAGTATAGTGGTGGCATGAAACGAAGGCTTAGTGTCGCAATCTCATTGATTGGGGACCCCAAGGTTGTTTTCATGGATGAACCTAGCACTGGACTAGATCCAGCATCAAGAAATAACTTGTGGAATGTTGTGAAGGAGGCAAAGAAAAATCGTGCTATCATTCTTACAACACATTCAATGGAAGAGGCAGAGGTGCTATGTGATAGACTCGGTATTTTTGTAGATGGTGGTTTTCAATGCCTTGGGAATCCAAAGGAGCTGAAAGCTAGATATGGTGGCACATATGTGTTCACTATGACAACATCTTCAGAACATGAACAGGAGGTCAAACAGCTGGTTCAACATTTGTCACCAAGTGCAAACAGAATATATCACATATCAGGGACGCAGAAATTTGAGCTGCCAAAACAGGAGGTGAAGATAGCAGATGTTTTCCATGCAGTTGAGAAGGCAAAAAGACAGTTCAGCATACACGCTTGGGGCCTCGTCGACACCACCTTGGAGGATGTCTTCATCAAGGTTGCCAAAGGAGCACAAGGAGTCAATGTGATCGCGTAA</cdnaseq>

Protein Sequence

<aaseq>MADTSSSSSSSSRGAAGFATQANALLRKNLCFQRRNMKTNACITVFPVFLCVILVVLQGVLNHELNKPKYQCGCACVDAAPDGTCRRTECGVEHSTLDQVGSCPIQSPTPWPALVQVPRPESRAVRIASQPFDGLPDPTCRGTGSCPASVLVTGMNRSLAQSLSGGLFPAVPPSLNFTDYLDTFSKIVAGSDTWTWTTQFIEPVFTPGHSLYVVQPQCSSNLSRTISNKAGPVPIQLNIDCVQGLSLWRESASQINNELFRGYRQQGGGGGEGKTNEFIAGYDFLNTNNNGLEINIWYNSTYNNNTAYDVISLLRVPRLVNTASNAYMKFLKGSGVEMLLEYVKDMPKVGTKPKFDLSSLLGALFFTWIIELLFPVILTYLVYEKQQKLKIMMKMHGLKDEPYWMISYSYFFALSAVYMIVFVVFGSLIGLNFFKTNNYGIQFVFYFIYINLQIALAFFVAAFFSSVKTATVVGYIYVFGSGLLGAFLLRFFVESTSFPKGWIVVMEIIPGFSLYRGLYELGQYAFSGNAMGTNGMEWTNLRDSENGMRNVLIIMVVEWAILLPLAFYLDKISSLGSGARKTPMFFLKRFKNRAVSLRRSFGRQGSKVVVEMDNPDVSQEREVVEQLLLEPNASQAIICDNLKKVYHGKDGNPDKLAVRGLSLALPKGQCFGMLGPNGAGKTSFISMMIGLIPPTSGTALVHGMDINTDMDSIYTNMGVCPQHDLLWETLTGKEHLLFYGRLKNLKGAELEKAVDDSLKNVNLFHGGVGNKQVGKYSGGMKRRLSVAISLIGDPKVVFMDEPSTGLDPASRNNLWNVVKEAKKNRAIILTTHSMEEAEVLCDRLGIFVDGGFQCLGNPKELKARYGGTYVFTMTTSSEHEQEVKQLVQHLSPSANRIYHISGTQKFELPKQEVKIADVFHAVEKAKRQFSIHAWGLVDTTLEDVFIKVAKGAQGVNVIA</aaseq>

Gene Sequence

<dnaseqindica>1..99#206..590#700..782#887..1031#1744..1872#1968..2092#2182..2340#2424..2586#2671..2796#2869..2952#3031..3392#3493..3693#3794..3903#4000..4084#4219..4347#4426..4531#4611..4699#4808..5107#ATGGCAGACACCTCCTCCTCCTCCTCCTCGTCGTCGAGGGGCGCCGCCGGATTCGCCACGCAGGCCAATGCCCTCCTCCGCAAGAACCTCTGCTTCCAGGTCCCCTCCTCCCTCTTTCTTTCTTGGCGCGTCTCCCCGATTTCGCAGGTTTTGGTTCGATTTCTCACCGTTTCTTGCTTGCTTGCGATTTCTTGCTTTGATGCAGAGGAGGAACATGAAGACGAACGCGTGCATCACGGTGTTCCCGGTGTTCCTGTGCGTGATCCTCGTCGTGCTCCAGGGGGTGCTCAACCACGAGCTCAACAAGCCCAAGTACCAGTGCGGCTGCGCCTGCGTGGACGCCGCGCCGGACGGGACCTGCCGGAGGACGGAGTGCGGCGTCGAGCACTCGACGCTGGACCAGGTGGGGAGCTGCCCGATTCAGAGCCCGACGCCATGGCCGGCCTTGGTCCAGGTCCCCCGCCCCGAGTCCCGGGCCGTCAGGATCGCCTCCCAGCCGTTCGACGGTTTGCCTGACCCGACCTGCAGGGGCACAGGGTCTTGCCCTGCCTCTGTCCTCGTCACCGGAATGAACCGCTCGCTTGCTCAAAGTATGTTCTTAGTTCGAAGACAAACTAGAAGGGGAAAAAACATCTGATTTGTTGTTCAATCTTTGGATCAAAGTGTTCATTAATTCATCGATGCTTTTACTGTTGGCAGGTCTTTCGGGTGGACTGTTCCCTGCTGTGCCTCCCTCTCTGAATTTCACGGATTATCTTGACACGTTCTCCAAGATTGTTGCTGTGAGTTTATTCGTGCCTAATGGCAGAATTGCTTGTACAGTCATTAGTCATGGTTGCCATGTTCTCTAATGTGTGGAGCTCTTGATTGGATTTATTTGTCTTAGGGGTCAGACACATGGACATGGACAACGCAGTTCATAGAGCCGGTATTTACCCCAGGGCATTCTTTATATGTGGTCCAGCCTCAGTGTTCGTCCAATTTATCACGAACAATTTCTAACAAAGCTGGACCTGTACCCATTCAACTCAGTAAGTTGCTTTTCTTTTCACAGTTTTTCGTTCAGCTGCATCTTTGTTTGAAGGAAGCAGGTAGCGAAAACAGGGTAACTTGCTAGGCCTAACTTATTTAATTTAATATGTACTAGGAAGTAAAGGCATATGGTATACTGAATAAGTAGGTAATTATGATAAAATTATAAAAAAATCATTGCCATTTGGAATTACTACCTCAGCACTGGTCACAGTTATATTCTCGGACCTGGAATTGCACAGTATTCCTCGTCATTATCAATAGTCAGACTTAACGCCTGGTAAAAAGAGTAGTAGTCGTACCACGTTATTTGTCAGTTATACCCTCCAGTAAGAAATACAAGTCGTTTTGAAATGCTCTTTTGTAATATTATAGTTCTATCACGTTTTATAAATATATTGCAACAGAAATCAGCGGTCAAAGATGCATTTTAGAAACTGTGTATATGTTCAAGACAACATGTATTTGGGACTGGGGGAGGAATTATTAAATAAGACACCAAAGCCATATTGGCATAAAGTTCTATAACATCATTTGACTATAAAAATCTAGATTTAAATATGTTTGATTAGCAATGTTCTGTTGATGTTGAATTCCAGTGTTATACTTCAACAGTAAGACTAAAGTCTGTCAATGTCCCTTCAATCTTTCATATATGTTTCCTACACCTGTGAAAATGTCCAAATCTGATATGCATTTCGCAATGTCCAGATATAGACTGCGTTCAAGGCTTATCATTATGGCGTGAAAGTGCATCACAAATCAATAATGAACTATTTAGAGGTTATAGACAGCAAGGTGGAGGAGGTGGAGAAGGAAAGACAAATGAATTTATTGCAGGTGATTTCATCTTCTGATCCCCTCAGAGAAAAGTGTCTGCCACTATTGATGTAATGGTTCCTTACCTTATGTCTAAGTTTGCTTTTTTTCCAAAGGCTATGATTTTCTGAACACAAACAACAATGGTCTTGAAATAAACATTTGGTACAACTCTACATATAACAACAACACTGCATATGACGTCATCTCATTGCTACGAGTTCCACGCTTGGTTAACACGGTACGTACACTGAACTTCCACTACCTCAAGTCTAACAATTTTCATATGCACTACAACTACTAATACAACTCATTCCATCTTTCCTATAGGCATCCAATGCATACATGAAATTTCTTAAAGGAAGTGGAGTGGAGATGCTGCTTGAATACGTTAAAGATATGCCAAAAGTAGGAACCAAACCAAAATTTGATCTCTCTTCTCTTCTTGGTGCTCTGTTCTTCACCTGGATCATTGAACTACTTTTTCCAGTGAGTATGAGATGCAACCTTTCTTAACTCTTACATAAGTTGCAGAGGACATCAAATTAGTTGGTACTTCATTTTGTTCCCAGGTTATCTTAACATATCTCGTGTACGAGAAGCAACAGAAGCTGAAAATTATGATGAAGATGCACGGCTTGAAGGATGAGCCTTACTGGATGATATCATATTCTTACTTCTTTGCTCTATCAGCTGTCTATATGATAGTGTTTGTGGTATTTGGATCCTTGATAGGTAATCAACTGGAAATTTCTTCAATCCATTGTATTTTTGCAAATAAATTTATCATGCTTACAAAATTAACTTTCTTCCTTACAGGTTTAAATTTCTTTAAAACAAATAACTACGGCATTCAGTTTGTTTTCTACTTCATCTACATAAATCTTCAGATCGCACTTGCATTTTTCGTTGCAGCCTTCTTTTCTTCTGTAAAAACAGCCACAGGTTTGTGATTCAAATGCTCAACTTCCAAAGAAGACTCGTGGATGACTAATTTGAGAAATTTCTGTGCTGCAGTGGTTGGTTATATATATGTATTTGGTTCTGGCTTACTAGGGGCATTTCTTCTGAGGTTTTTTGTGGAGTCTACTAGTTTTCCGAGTAGGTTTCTTTTCTATTTATTGTAGCTATTGTTTTTTATATCTTATGCATGACAAGCATTGTTTTCTCCATTCAAAGAGGGTTGGATAGTAGTCATGGAAATCATCCCTGGATTTTCTCTGTACCGAGGGTTATATGAGCTTGGTCAATATGCATTCTCTGGAAATGCAATGGGAACAAATGGTATGGAGTGGACTAATCTGCGCGACTCTGAGAATGGAATGCGCAATGTCTTGATTATCATGGTTGTCGAATGGGCTATACTACTCCCATTAGCATTTTATTTGGATAAAATCTCATCATTGGGTAGTGGAGCACGTAAAACACCCATGTTCTTCTTGAAACGTTTCAAAAATCGTGCTGTATCACTGCGGAGGAGCTTTGGGAGACAAGGGTCTAAAGTAGTTGTTGAAATGGACAACCCTGATGTTTCCCAAGAAGTAAGTTAATCCTGATTTTGTATATATGTTGAAATCGTGTTGTTGCATATTCTCAAATTGCATAAATGTTTCATTCCTGATTTTGCTAAATTGTATCCAGAGAGAGGTAGTCGAGCAACTTCTGCTGGAACCAAATGCAAGCCAAGCAATCATATGCGACAACCTGAAGAAGGTTTACCATGGAAAGGATGGAAACCCGGACAAACTTGCAGTTCGAGGGTTGTCTCTTGCCCTCCCTAAAGGCCAATGTTTTGGTATGCTTGGCCCGAATGGAGCAGGGAAAACATCATTTATCAGCATGGTACAGTGGCAACAAGTAGCTCTTCAATTCTGACAAAAAAAATAGACAATGTTACACGATCCTTACTTGGCATATACTTTCCATGTTTTTTCCTCCATAGATGATTGGGCTCATTCCACCCACATCTGGCACAGCATTAGTCCATGGGATGGACATAAACACTGATATGGATAGCATCTACACAAATATGGGTGTATGCCCACAACACGAGTATGATTCTTGCTCTAAAACTAATTTATTTAGTACCATTTTTATGGTTATCCATTGCAAAATATATTGTGGTTGCTAATGCTGCTTAAAATACAGCCTACTTTGGGAAACATTGACTGGAAAAGAGCATCTATTGTTTTATGGGAGATTAAAGAATCTTAAAGGCGCTGAATTAGAGAAGGTATAGTTATCCTCACACTCATCTCTTTATTTTCCTTCACTGTAAATTGGTGTGTTAATTTTGTCTTGTGGTAACAATTCCAATATTACACATGAATATATCAATATTTGAACTGACAAATAGCATACTATCAGGCAGTTGATGACTCCCTGAAGAATGTTAACCTGTTTCACGGTGGTGTTGGAAATAAGCAAGTGGGGAAGTATAGTGGTGGCATGAAACGAAGGCTTAGTGTCGCAATCTCATTGATTGGGGACCCCAAGGTACTAATATGATTTATGTGTGTTGATTTTCAACTGCACATAATGCAATGGAGTGTGCAACTGAAAAAGTTCTTTTAGGTTGTTTTCATGGATGAACCTAGCACTGGACTAGATCCAGCATCAAGAAATAACTTGTGGAATGTTGTGAAGGAGGCAAAGAAAAATCGTGCTATCATTCTTACAAGTAATGAGCTTTTCTGACCTTCTTTAAATTGCCTATATGAACAATAATAGTGGATAATCCAGTATGTTTTTTTTTTCAGCACATTCAATGGAAGAGGCAGAGGTGCTATGTGATAGACTCGGTATTTTTGTAGATGGTGGTTTTCAATGCCTTGGGAATCCAAAGGAGGTAATTTACATAGTTACCTGCAAAAACAAATAAATACACTTAATGTAACATGCCTATTATAAACATTTGTTAATATCTGAACATTTGGATTGCATTCTGTTTTGGCAGCTGAAAGCTAGATATGGTGGCACATATGTGTTCACTATGACAACATCTTCAGAACATGAACAGGAGGTCAAACAGCTGGTTCAACATTTGTCACCAAGTGCAAACAGAATATATCACATATCAGGGACGCAGAAATTTGAGCTGCCAAAACAGGAGGTGAAGATAGCAGATGTTTTCCATGCAGTTGAGAAGGCAAAAAGACAGTTCAGCATACACGCTTGGGGCCTCGTCGACACCACCTTGGAGGATGTCTTCATCAAGGTTGCCAAAGGAGCACAAGGAGTCAATGTGATCGCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028618