BGIOSGA028619

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Revision as of 08:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028619| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028619, complete gene.| tag = OsI_291...")
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Gene Name

BGIOSGA028619

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028619, complete gene.

LocusTag

OsI_29141

Ensembl Transcript ID

BGIOSGA028619-TA

Ensembl Protein ID

BGIOSGA028619-PA

Length

6860

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20195811..20202670

Sequence Coding Region

20195811..20195903,20196062..20196455,20197673..20197776,20199201..20199359,20199460..20199622
,20199884..20200009,20200138..20200490,20200781..20200981,20201180..20201289
,20201391..20201475,20201675..20201803,20201906..20202011,20202137..20202225
,20202368..20202670

Genome Context

<gbrowseImage1> name=IndicaChromosome08:20195811..20202670 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:20195811..20202670 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGGTTCTTGCCGCGTGCGACGACGGCTTGCGAGGTTCTTCAGGCAGGTCCACGCGCTCCTCCTCAAGAACCTCTCTTTCCAGAGGAGGAACGCCAAGGCGAACGCGGCGATCGCGGCGTTCCCGGCGCTGCTGTGCGTGCTGCTCGTCGCGATCCAGGCCGTCATCGACGGCGAGCTGGACCGGCCGCCGTTCCGGTGCGGCTGCGCCTGCGTGCGCCGCGACGACGGTGGCCGCGCGGGGGCGTGCGCGGCGACGGAGTGCGGCGTGCAGCACTCCACGGCCACGCAGGCGCTCAGCTGCGCCGTGCCGGCGCCGCCGAGGTGGCCGGCGGTGACGCAGGTCCCGGACGCGCCGTACCGCGCGCTGACGCCCGTGCACCCGGCGAGGTGTCGCGGCGACGGTGGTGGCGGCGCGTCGGAGGCGCCGTGCCCGGTCGCCGTGCTCACCACCGGCCAGAACCGCAGGCTGACTGAAGGCCTTGGAAGGGGATTGTTCCCAGATGTCCCTGCTTCATACTATCCTGGTGCGCCCAATTCCAACAATTCATCTTATCTTGATGAGTTATCAACAATAGTCCCTGCATCCACCGCATATCTGAAGTTTCTTCGAGGACCCAATGTGGAAATGCGCCTGGAATATTTGAAAGAAATGCCAAAAGCTGCAATGAAAATCAGGCTGGACCTTACCACTCTCCTAGATGCATTATTCTTTACATGGACAGTTCAACTTCTCCTTCCAGTAATGTTGACATATCTTGTTTATGAGAAGCAGCACAATTTAAGACTGATGATGAAGATGCATGGGCTAAAGGATGGACCTTATTGGATGATATCTTACGCCTATTTCTTGTCCCTTTCAGCAGCTTACATGATGTTCTTCGTGATGTTTGGGTCCCTTATAGCTCTTCAAATGACCTCAGAATCAAATATTTTCTGTGTTACAGTAATTAGTTACATTTATGTCTTTGGATCAAGCCTTCTTGGAGAAGCACTTCTGCAATTGTTCATTGAAGATATTACATTCCCAAGACAATGGCTTGTGACAATGGAGCTTGTTCCCGGGTTCGCCCTCTACCGAGGATTTTACGAGCTCGCAGAGTATGCATTTGCAGGAAGGCAAATGGGAAAGCCTGGGATGCAATGGAGGGACTTGAATGACCCCATCAATGGGATGAAAGATGTTTTGCTTCTAATGTCTATAGAGTGGATACTTCTGCTTCCTGTGGCATTTTTACTGGATCATAGACCTACATGGCATCCATTGTTCCTCTTTGGGTTTATGTCAACAAAGCACTCTTCACCAACAATGATACCAGACAAAGTGAAACAGAGGTCCAGAAAGGTGTTTGCTGATATGGCAAAACCTGATGTTTTCCTTGAGCGCAAGGCGGTGAAAAAATTGCTGAAGGAAATGGACATGAGGAATATGATCATATGCCATAACCTGAAGAAGGTGTACCCTGGAAAGAATGGAAACCCTGATAAGCTTGCTGTTAAAGGATTGTCGCTTGCTTTGCACAAAGGACAGTGTTTTGGAATGCTTGGTCCCAATGGGGCAGGGAAAACATCCTTCATCAACATGATGATTGGACTTGTGGCGCCAACTTATGGAACTGCCTACATACATGGGATGGATTTGAGGAGAGATATGAATGAAATATATGCAAACATTGGTGTATGTCCACAGCACGATTTGCTTTGGGAAACTCTGACAGGAAGAGAGCATCTAATGTTCTATGGCCGACTGAAGAATCTCACAGGTGCTGCTCTACTGAAGGCAGTGAATGAATCCCTGAAGAGTGTAAATCTGTTCCACAGCGGTTTCGGCGACAAATCGGTGAACAAGTACAGTGGTGGCATGAAAAGAAGGCTTAGTGTCGCCATCGCACTGATTGGCAACCCAAAGGTTGTTTACATGGACGAACCGAGCACCGGATTGGACACGACATCGAGGAGCAATCTCTGGAATGTCATTAAGAGAGCAAAGAAGAACTGCACCATCATTCTCACCACACATTCCATGGAGGAGGCTGAGGAGCTCTGCGATCGCGTCGGCATCTTCGTCGACGGCAATTTCCAGTGCCTCGGAACTCCAAAGGAGCTGAAGGCGAGGTACGGCGGCGTGCGGGCGCTGACGATAACGACGGCGGCGGGGCACGAGGAGGCGGTGGAGCGCGCGGTGGCGCGGCGGTGCCCCGGCGCGGCGAAGGTGTACGGCGTGGGCGGGACGCAGCGGTTCGAGGTGCCCCGGCGAGGGGCGCGGCTGGACGGCGTGCTGGGCGCGGTGGAGGCGGCACGGCGGGCGGCGCCGGTGGTGGCGTGGGGGGTGGCGGACGCGACGCTGGAGGACGTGTTCGTCCGGGTCGCCATGGACGCGCGCGCCGCCGCCCACGTCCTCTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAGSCRVRRRLARFFRQVHALLLKNLSFQRRNAKANAAIAAFPALLCVLLVAIQAVIDGELDRPPFRCGCACVRRDDGGRAGACAATECGVQHSTATQALSCAVPAPPRWPAVTQVPDAPYRALTPVHPARCRGDGGGGASEAPCPVAVLTTGQNRRLTEGLGRGLFPDVPASYYPGAPNSNNSSYLDELSTIVPASTAYLKFLRGPNVEMRLEYLKEMPKAAMKIRLDLTTLLDALFFTWTVQLLLPVMLTYLVYEKQHNLRLMMKMHGLKDGPYWMISYAYFLSLSAAYMMFFVMFGSLIALQMTSESNIFCVTVISYIYVFGSSLLGEALLQLFIEDITFPRQWLVTMELVPGFALYRGFYELAEYAFAGRQMGKPGMQWRDLNDPINGMKDVLLLMSIEWILLLPVAFLLDHRPTWHPLFLFGFMSTKHSSPTMIPDKVKQRSRKVFADMAKPDVFLERKAVKKLLKEMDMRNMIICHNLKKVYPGKNGNPDKLAVKGLSLALHKGQCFGMLGPNGAGKTSFINMMIGLVAPTYGTAYIHGMDLRRDMNEIYANIGVCPQHDLLWETLTGREHLMFYGRLKNLTGAALLKAVNESLKSVNLFHSGFGDKSVNKYSGGMKRRLSVAIALIGNPKVVYMDEPSTGLDTTSRSNLWNVIKRAKKNCTIILTTHSMEEAEELCDRVGIFVDGNFQCLGTPKELKARYGGVRALTITTAAGHEEAVERAVARRCPGAAKVYGVGGTQRFEVPRRGARLDGVLGAVEAARRAAPVVAWGVADATLEDVFVRVAMDARAAAHVLS</aaseq>

Gene Sequence

<dnaseqindica>1..93#252..645#1863..1966#3391..3549#3650..3812#4074..4199#4328..4680#4971..5171#5370..5479#5581..5665#5865..5993#6096..6201#6327..6415#6558..6860#ATGGCGGCGGCGGGTTCTTGCCGCGTGCGACGACGGCTTGCGAGGTTCTTCAGGCAGGTCCACGCGCTCCTCCTCAAGAACCTCTCTTTCCAGGTAGGTGATGGTGATGCAAATGCTGTTTCATCCATCCACGAATCCGGTTCTTGAAATCGATTTCAAACTTGTTCTTGGATGAAGATAATGTTTGATTCTTGAGACGTTAATATGTTATCAAGAACTTGCTGAATTGTTTTCGTGTTCTTGGATGGCAGAGGAGGAACGCCAAGGCGAACGCGGCGATCGCGGCGTTCCCGGCGCTGCTGTGCGTGCTGCTCGTCGCGATCCAGGCCGTCATCGACGGCGAGCTGGACCGGCCGCCGTTCCGGTGCGGCTGCGCCTGCGTGCGCCGCGACGACGGTGGCCGCGCGGGGGCGTGCGCGGCGACGGAGTGCGGCGTGCAGCACTCCACGGCCACGCAGGCGCTCAGCTGCGCCGTGCCGGCGCCGCCGAGGTGGCCGGCGGTGACGCAGGTCCCGGACGCGCCGTACCGCGCGCTGACGCCCGTGCACCCGGCGAGGTGTCGCGGCGACGGTGGTGGCGGCGCGTCGGAGGCGCCGTGCCCGGTCGCCGTGCTCACCACCGGCCAGAACCGCAGGCTGACTGAAGGTGCATGCAAACCAGCAAATGTAGTATATTTTTATGTTGTTCATGTAGCTCCTCTGCATTTTTTCTTTCGATTTTTTAAATTTGTTTTTTCTTTATTATATGAAAGACGCACACCTACACGAGAAATCTGACAGCTATTATCATAAGTGCTATTATCATAAGTGGGTTTCACCCAAATACTACTATCCAAAAGGATTCAATAAAATGTCACATCAACATATGCTTACATGCTAGAATATTATATGGGACCAAATTACCCTCCATTATTCTTCCTCTCGCAGCTGGTCTAAACTTTTCCTCTCCAAGTCGTACATGACGAAGGAGAGGGAGAGAGCGCGCAGAGAGAAGATCAGTGATGGGACCAAATGCTGGTGGGCCAATAACTAGAGGGAGAGGTGGAGTCGGTGAGGCCCAAGGTCGGCAAGATAGGGCACAGTTAGCGAGAAAGCCAAGGCCACGTCATCGGCACTCGGTGTGCACGACAAGGTGACCTACACTGGAGTCGATGGCGGACATGGTCAAGGCAGCGCTTGATGCAGGCCAACCTTGTCACGAGCCGCTTATGCGCAGTGACGAGAAGAGAGGTGTCGTACTCAACTCCCCGCCGCGATGGCCAAAGCTTGCCTAGGTGGTGCCATTGTCCTCGGTGTAGAAGGAGGAGGCGGCGATGGCCGAAGCCCACCGAGGCGCCGCCAGTATCACTGGTGGAGAGGGAGGAGAAGGTGGAGGCGGCGACAGCCGGAGACCTCCGGGCATCGCCAATATCCCAGATGGAGAGGGAGGAGGAGGCGATGGCAAGAGCCAGCCGGCCCGCCGCCGCCTTTTTCCTCGGTGGAGAGGGAATGGAGCTGTGGAGGGATAAAGAAGAGGAGTGAAGGGGTAATTTGGTCCCAAATAGTATTTTAACGAGTAGGCATGAGTTAATAGTGGCATTTTATCGAATTCCTTTTAGAGAATGGTATTTGGGCGAAACCCACTTGTGACGATGGCATAATGTCAAATTTATCCATGTACACGTAGGAAGCAGATCCTCTGACAGTTGAGTCACTAACATGTGAGTCTCATTTTACTATATCTCACATGTCAATGGCTCAATTACACATGCAGTTAAGCCAAAGGATCTTTTTTTTTTGGTACAGATACCACTACACACACATCACACACGTTTTGCTGCAGCTTTTGCTTTTGTTGTTGTGACTGAAACTTTTTTTTGCCAGGCCTTGGAAGGGGATTGTTCCCAGATGTCCCTGCTTCATACTATCCTGGTGCGCCCAATTCCAACAATTCATCTTATCTTGATGAGTTATCAACAATAGTCCCTGTGAGTTGAATATTTGAAATTTTGAGTGATCAGTGGCGTTTTACGCAATAGATTCAATGCTTTTCTAACTCTGATTTGTGATGGAAAGGGTGATATTGAATATTTCTTTTTCCAGGGTACAAGCACATTACCAGCGCATGTATTGTTCATAGAGCCAGGATTTGTGCCCAATAGTACCCTATATGTGGTTCAAAGAAAATGTATATGGGATTCGCACAATACTTCAGGAAGTTCTGATACGATGCCAATTCAACTCGGTAAAAGATTGTTTGTTTCTTGCTTGTATGAAGCTGTAGCAACTAGCATGAAATGTTTTCAACCCTGAATTATTTGTGCATTTTGTGCATAGTATAATAACAGTCTTCACTTCTTTTTATTTTAAAATGTAATAGATGTGAAGTGTGTTCAAGGTTTGTCACTGTGGTGCCGGAATTCAGCGGTGATGAATGACCATTTGTATAAGGGTTATAAGGGTGGAAATAAGAGGAGGACATCGAACGAATATCTCGCTGGTAGCCTTGTCTTAATTTAGTTTTCCTTCCAACTGTACTACTAAAGTAGCAGTTCAGATTTTTTTTTGGGGGGGGTTAACCAAATACTCCCTCCGTTTTTTAATAGATGACGCCGTTGACTTTTTCTCACATGTTTGACCATTCGGTCTTATTCAAAAATTTTATACAAATGTATACGATATATATCACACTTAAAGTATTATGAGTGATACATCTACTCATAACTATATATATTATAATTACGTAAATTTTTTGAATAAGATGAATGGTCAAACATGTGAGACAAAGTCAACGGCGTCATCTATTAACAAACGGAGGGAGTATCTTATTTTAAGGTCCATTTTTGCAGGCTACGATTTTCTTGATACAAGCAAGAGGAGGTTTCATGTGTATGTCTCATACAACTCTACCTTCAGCAGGGACAATGGACACCATCCCATGACAGTTTTGCGTGTTGCACGGTTGGTTAATATGGTACTTAACTTGCCTGTTGTGGTACATTTTCACTTTTAGGTAGAGGAATACTCCATTGAATATTAAAGGGCATTTATCTGAACTAAAGAAATATCAACAATTATATAGTAAGAGCCGGAAAACATGATTTTTACCATTTCGCTTAATGGAAAATGGGGATACCCTCATTCAAAAAATATATGGTAAAAACTAGAAATGGAAGGGCTACATAGAAGGCATGGTGCACTCCTATAGTGTTCCATCAAAACAAGGCTACTGTAGCAAAAACAGCACATCTTCTACAACAGCACTTCATGGTTCTTGTCATTTGTGTTGTTTTTGTTGCCCGGATGGATATATGTGCCAATTTTTTTCAGAGTCCTTTCCTAAAAATGAGTTCATCTGTTATAGGTCCTAAATAACTTAGTATTATCACTACTGATTATGCATTTTCATCAGGCATCCACCGCATATCTGAAGTTTCTTCGAGGACCCAATGTGGAAATGCGCCTGGAATATTTGAAAGAAATGCCAAAAGCTGCAATGAAAATCAGGCTGGACCTTACCACTCTCCTAGATGCATTATTCTTTACATGGACAGTTCAACTTCTCCTTCCAGTGAGTTAATTTTCTCGTATCCCACAAATCGATCTCTTATCAAAGCTATGTTGGATTCATACACATGTTATTTACCAATTTATTTCAATGGTTTTTTCAGGTAATGTTGACATATCTTGTTTATGAGAAGCAGCACAATTTAAGACTGATGATGAAGATGCATGGGCTAAAGGATGGACCTTATTGGATGATATCTTACGCCTATTTCTTGTCCCTTTCAGCAGCTTACATGATGTTCTTCGTGATGTTTGGGTCCCTTATAGGTACTGTGCTAGTTAACTACAGAGTATGGAAATTGAGAATTTAACACATTCGGGTAAGCTTCGAAATCACTGAGAGAACTCTTTTTGGTATTGCAGGGCTAGATATCTTCATATTAAATAGCTACAGCATACAATTTGTATTCTATTTTCTATATATCAACCTTCAGATCGTGTTCGCCTTTCTGCTTGCGTCTTTCTTCTCGTCTGTCAGTCTGCTAGCGGTTAGTAAAATTCAAACCTTCTGTTCTGTTCATTCTGTAGCTCTTCAAATGACCTCAGAATCAAATATTTTCTGTGTTACAGTAATTAGTTACATTTATGTCTTTGGATCAAGCCTTCTTGGAGAAGCACTTCTGCAATTGTTCATTGAAGATATTACATTCCCAAGTAAGTATAAGCACTTCTGCAATTGTTCATTGAAGATACTACATTCCCATGCAAGTTTTTTCCCAGGAATTATTCTGAATATATTTATTGGATACTCATCAAGAACTACCATTCTACCTGTTTATTAGGACAATGGCTTGTGACAATGGAGCTTGTTCCCGGGTTCGCCCTCTACCGAGGATTTTACGAGCTCGCAGAGTATGCATTTGCAGGAAGGCAAATGGGAAAGCCTGGGATGCAATGGAGGGACTTGAATGACCCCATCAATGGGATGAAAGATGTTTTGCTTCTAATGTCTATAGAGTGGATACTTCTGCTTCCTGTGGCATTTTTACTGGATCATAGACCTACATGGCATCCATTGTTCCTCTTTGGGTTTATGTCAACAAAGCACTCTTCACCAACAATGATACCAGACAAAGTGAAACAGAGGTCCAGAAAGGTGTTTGCTGATATGGCAAAACCTGATGTTTTCCTTGAGGTTAGTTAACCATACATTCGAATAGGGTCAGGATCCTCTACCTTCAAAGTCACACGACTTTGTCACTGACATGTCGGACAAAGGCACGGTGATTTCGAAGGTAGAGGATCTCAATCCATTTGAATTGGCATGCTTCTTTTTTTTTTATCTGCAATAGATGTGATTAAATACACGTCTATAGAAGTTAATAGATAGCGTTTTCCAAGATAGAAGTATACTGAAGTAATGCTGAACTATAATATTCAACAAGGATACTGTCATAAATTGTTGTTCAAAATTCTACTTTTCAGCGCAAGGCGGTGAAAAAATTGCTGAAGGAAATGGACATGAGGAATATGATCATATGCCATAACCTGAAGAAGGTGTACCCTGGAAAGAATGGAAACCCTGATAAGCTTGCTGTTAAAGGATTGTCGCTTGCTTTGCACAAAGGACAGTGTTTTGGAATGCTTGGTCCCAATGGGGCAGGGAAAACATCCTTCATCAACATGGTGAATATTTCACTATATTCTTGTGCTTCTTAAGATGTTTTGTCAAAATAGCATTTATATCTGCTTCATCAACACTTCAAAGTAGCTCTCATTTTTCACATGAATCAAGTAGTACTTAAATTTATCCATTTTTCCTAGTAGTGAAATAACATGAAAAAACCTAACAAATACACCTTTTGGACCAATTTATATTTGCAGATGATTGGACTTGTGGCGCCAACTTATGGAACTGCCTACATACATGGGATGGATTTGAGGAGAGATATGAATGAAATATATGCAAACATTGGTGTATGTCCACAGCACGAGTATGATCTCAAGTGGCTAGTTCTTTTGCATTTCTTCTGAAGATGGTTTTGTTAGTGATATCATTGCCAACAAAAAAGAAAATTGTTCAATGTGTGTGCAGTTTGCTTTGGGAAACTCTGACAGGAAGAGAGCATCTAATGTTCTATGGCCGACTGAAGAATCTCACAGGTGCTGCTCTACTGAAGGTAGTTTAATTGAATCCATGAAAAAGGAAAGAGCATGTAAAATTACAGCACTAGCTTTATACAGTCAAACTGCAAGTTTTAAGTCTCATAATACTTCTTACAAGTAAAATTGCAAATGTTCACTCCATTTGTAGTAATACACATGGCATTGGAAACAATTCTAGTATTTGATCATCAGATTTTACTTTTCTTGATCCAGGCAGTGAATGAATCCCTGAAGAGTGTAAATCTGTTCCACAGCGGTTTCGGCGACAAATCGGTGAACAAGTACAGTGGTGGCATGAAAAGAAGGCTTAGTGTCGCCATCGCACTGATTGGCAACCCAAAGGTAGTAAATTTACCATGAACAGTTCTTCATTCCCTTCCACTCACATCTCTGAAAAAACTTCAGCTGTAACTGTCTTCCATTGATTCCATTGATGTTGAACAGGTTGTTTACATGGACGAACCGAGCACCGGATTGGACACGACATCGAGGAGCAATCTCTGGAATGTCATTAAGAGAGCAAAGAAGAACTGCACCATCATTCTCACCAGTAATTAATTAATCCTCCTATTGGTTATTTTTTTCTTTCCAGCAAAATATGCAAACAGCAATATTTGTGGCTAAATTAACAACTAGTAGACCTGAATTAATATATATGAACACTGAACATTTCAGCACATTCCATGGAGGAGGCTGAGGAGCTCTGCGATCGCGTCGGCATCTTCGTCGACGGCAATTTCCAGTGCCTCGGAACTCCAAAGGAGGTAATCAAATTTAAACACCTCAAAAACTCAGTTAAAGAAAACAAATGCAGAATTAATTCATCTGAAAGTTTGAGTTTCTTTTGCCGGCTATTCAGTAATAAGTGCATTGATTGACTGATTGATTGATTGATTGATGTTGCAGCTGAAGGCGAGGTACGGCGGCGTGCGGGCGCTGACGATAACGACGGCGGCGGGGCACGAGGAGGCGGTGGAGCGCGCGGTGGCGCGGCGGTGCCCCGGCGCGGCGAAGGTGTACGGCGTGGGCGGGACGCAGCGGTTCGAGGTGCCCCGGCGAGGGGCGCGGCTGGACGGCGTGCTGGGCGCGGTGGAGGCGGCACGGCGGGCGGCGCCGGTGGTGGCGTGGGGGGTGGCGGACGCGACGCTGGAGGACGTGTTCGTCCGGGTCGCCATGGACGCGCGCGCCGCCGCCCACGTCCTCTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028619