BGIOSGA028625

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Revision as of 08:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028625| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028625, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA028625

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028625, complete gene.

LocusTag

OSJNBA0086F04.1

Ensembl Transcript ID

BGIOSGA028625-TA

Ensembl Protein ID

BGIOSGA028625-PA

Length

1722

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20278996..20280717

Sequence Coding Region

20278996..20280717

Genome Context

<gbrowseImage1> name=IndicaChromosome08:20278996..20280717 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:20278996..20280717 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGATTGCCTCTACATCTGGATTGGCGGGCAAGGACAACCTTACCGATGAAAAGGCTTTGAGCTTGGAAGATGATGATATTTTGAAGGCACTAGTTGTTCATGATGGAAAGCTTGAGGTGTATCTTAATGTTCCCTCATGCGTTCAGCTTCATAGGCAACATGGAAGTGGGAATGCTGATGATAGGAGCAAAATCAGGATGTTGTGCAGGAGGTTTCAGTTTATATGCAGGGCTCTCTTACATGCCGTCGAACAGGGTTCATTGAAGATTCGAAGAGTTGACCTTGCAGCTGATAAAATCATCAGGAAATTGCCAGGCTTTACCAAACCTGGACCTACTGTGGGAAATGTTAATGGAGTGGAAGTTGGTGACGAATTTATGTACAGAGTTGAGCTAGCCCTTGTTGGTCTCCATCGCCCATACCAGGGAGGAATTGATACCACCGATTATAATGGAGTGCTTGTTGCAATAAGCATCGTTTGTTCTGGAGGTTATCCTGATGAATTGTCAAGCTCAGGTGAACTAATATACACTGGTTCTGGAGGAAAGCCTGCTGGTAAGAAGAAAGATGAGGATCAAAAGCTAGAGAGGGGGAACCTTGCCTTGAAGAATTGCATCGAGACAAAGACACCTGTCCGAGTGATTCATGGATTCAAAGGTCAAAATAGAGAGGACAACAGTCATTCAAGAGCTAAACAAATCCTAACATTTACTTATGATGGGTTGTACCTTGTGGTGGATTGCTGGACAGAAGGACTAAAAGGTTCAAGGATCTTCAAATACAAATTACAAAGGATTCCTGGACAACCAGAACTTCCTCTGCACATAGCTAAAGGGCTGAGAAGGTCTCTTTCACGTCCAGGCCTCTGCATAGCTGATATATCTCAAGGGAAAGAAATGGATCCCATCTGTGTGATCAATGATGTTAGTAATGTCCATCCAACATCTTTTCTCTCTAGAATCAAGTACCCGTCATGGCTTACAAAAAGACATCCTCAGCATCATGGTTGCGATTGCTCAGATGGCTGCATAGATTCTACTAAGTGCTTTTGTGCTGTGAAGAATGGAGGAAAAATCCCATTCAACTCCAATGGTGCAATTGTCCATGATAAACCCCTCATTTTTGAGTGTGGTCCATCCTGTAGGTGCCATTCTTCATGCCACAACAGGGTAAGTCAGAAGGGTATGAAAATCCACCTGGAAGTTTTCAGGACAGCCAATAAAGGTTGGGGTGTAAGATCCCTAAGGTCCATCTCTTCTGGCAGCTTTATATGTGAGTATGTTGGTATCCTGTTGACTGACAAGGAAGCTGACAAGAGAACAAACGATGAATACTTGTTTGATATAAGCCATAACTGTGATGATGAGGATTGCTCCAAGGGGAGGCCATCAACTATTTCTAGTCTAAACTCTTCTGGTGGTTGCTCTCAGACCATGGAAGATGTGTGCTTCACGATAGATGCGTCTGAGTACGGAAATATTGGAAGATTTATCAACCATAGTTGCTCACCTAACCTCTATGCACAAAATGTGCTTTGGGATCATGATGACCAAAGGGTGCCCCATATCATGTTCTTTGCTGCAGAGAACATTCCTCCACTCCAAGAGCTCACTTATGACTATAACTATAAAATAGGTGAAGTCCGCGACCTGAATGGCAGAGTAAAAGTTAAAGATTGCCATTGTGGTTCTCCACAGTGCTGCGGCAGGCTCTATTAG</cdnaseq>

Protein Sequence

<aaseq>MKIASTSGLAGKDNLTDEKALSLEDDDILKALVVHDGKLEVYLNVPSCVQLHRQHGSGNADDRSKIRMLCRRFQFICRALLHAVEQGSLKIRRVDLAADKIIRKLPGFTKPGPTVGNVNGVEVGDEFMYRVELALVGLHRPYQGGIDTTDYNGVLVAISIVCSGGYPDELSSSGELIYTGSGGKPAGKKKDEDQKLERGNLALKNCIETKTPVRVIHGFKGQNREDNSHSRAKQILTFTYDGLYLVVDCWTEGLKGSRIFKYKLQRIPGQPELPLHIAKGLRRSLSRPGLCIADISQGKEMDPICVINDVSNVHPTSFLSRIKYPSWLTKRHPQHHGCDCSDGCIDSTKCFCAVKNGGKIPFNSNGAIVHDKPLIFECGPSCRCHSSCHNRVSQKGMKIHLEVFRTANKGWGVRSLRSISSGSFICEYVGILLTDKEADKRTNDEYLFDISHNCDDEDCSKGRPSTISSLNSSGGCSQTMEDVCFTIDASEYGNIGRFINHSCSPNLYAQNVLWDHDDQRVPHIMFFAAENIPPLQELTYDYNYKIGEVRDLNGRVKVKDCHCGSPQCCGRLY</aaseq>

Gene Sequence

<dnaseqindica>1..1722#ATGAAGATTGCCTCTACATCTGGATTGGCGGGCAAGGACAACCTTACCGATGAAAAGGCTTTGAGCTTGGAAGATGATGATATTTTGAAGGCACTAGTTGTTCATGATGGAAAGCTTGAGGTGTATCTTAATGTTCCCTCATGCGTTCAGCTTCATAGGCAACATGGAAGTGGGAATGCTGATGATAGGAGCAAAATCAGGATGTTGTGCAGGAGGTTTCAGTTTATATGCAGGGCTCTCTTACATGCCGTCGAACAGGGTTCATTGAAGATTCGAAGAGTTGACCTTGCAGCTGATAAAATCATCAGGAAATTGCCAGGCTTTACCAAACCTGGACCTACTGTGGGAAATGTTAATGGAGTGGAAGTTGGTGACGAATTTATGTACAGAGTTGAGCTAGCCCTTGTTGGTCTCCATCGCCCATACCAGGGAGGAATTGATACCACCGATTATAATGGAGTGCTTGTTGCAATAAGCATCGTTTGTTCTGGAGGTTATCCTGATGAATTGTCAAGCTCAGGTGAACTAATATACACTGGTTCTGGAGGAAAGCCTGCTGGTAAGAAGAAAGATGAGGATCAAAAGCTAGAGAGGGGGAACCTTGCCTTGAAGAATTGCATCGAGACAAAGACACCTGTCCGAGTGATTCATGGATTCAAAGGTCAAAATAGAGAGGACAACAGTCATTCAAGAGCTAAACAAATCCTAACATTTACTTATGATGGGTTGTACCTTGTGGTGGATTGCTGGACAGAAGGACTAAAAGGTTCAAGGATCTTCAAATACAAATTACAAAGGATTCCTGGACAACCAGAACTTCCTCTGCACATAGCTAAAGGGCTGAGAAGGTCTCTTTCACGTCCAGGCCTCTGCATAGCTGATATATCTCAAGGGAAAGAAATGGATCCCATCTGTGTGATCAATGATGTTAGTAATGTCCATCCAACATCTTTTCTCTCTAGAATCAAGTACCCGTCATGGCTTACAAAAAGACATCCTCAGCATCATGGTTGCGATTGCTCAGATGGCTGCATAGATTCTACTAAGTGCTTTTGTGCTGTGAAGAATGGAGGAAAAATCCCATTCAACTCCAATGGTGCAATTGTCCATGATAAACCCCTCATTTTTGAGTGTGGTCCATCCTGTAGGTGCCATTCTTCATGCCACAACAGGGTAAGTCAGAAGGGTATGAAAATCCACCTGGAAGTTTTCAGGACAGCCAATAAAGGTTGGGGTGTAAGATCCCTAAGGTCCATCTCTTCTGGCAGCTTTATATGTGAGTATGTTGGTATCCTGTTGACTGACAAGGAAGCTGACAAGAGAACAAACGATGAATACTTGTTTGATATAAGCCATAACTGTGATGATGAGGATTGCTCCAAGGGGAGGCCATCAACTATTTCTAGTCTAAACTCTTCTGGTGGTTGCTCTCAGACCATGGAAGATGTGTGCTTCACGATAGATGCGTCTGAGTACGGAAATATTGGAAGATTTATCAACCATAGTTGCTCACCTAACCTCTATGCACAAAATGTGCTTTGGGATCATGATGACCAAAGGGTGCCCCATATCATGTTCTTTGCTGCAGAGAACATTCCTCCACTCCAAGAGCTCACTTATGACTATAACTATAAAATAGGTGAAGTCCGCGACCTGAATGGCAGAGTAAAAGTTAAAGATTGCCATTGTGGTTCTCCACAGTGCTGCGGCAGGCTCTATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028625