Os09g0317700

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Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0317700| Description = Homeodomain-like containing protein| Version = NM_001069386.1 GI:115478511 GeneID:4346703| Length = 4392 bp| Defini...")
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Gene Name

Os09g0317700

Description

Homeodomain-like containing protein

Version

NM_001069386.1 GI:115478511 GeneID:4346703

Length

4392 bp

Definition

Oryza sativa Japonica Group Os09g0317700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9445165..9449556

Sequence Coding Region

9445475..9446554,9446637..9447044

Expression

GEO Profiles:Os09g0317700

Genome Context

<gbrowseImage1> name=NC_008402:9445165..9449556 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:9445165..9449556 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcctcacccacctagtagttattcagataaaaaaacttgccaaaatgtcccaccagaaaaacccagctccacgagtttctgccatccacaatttccgcagcacttactttcacatccagcatatgcaatgaatttccctttcccgccgtttcctcactatcctccatactcgcaaaatttccaatatgctgttccaccacaatatgctccatactcattaccgccacctgatggagctatgccatcaccatatgtaccagctacagttatgccatccaaggcaccctctgatcaaggcaccccacattcagtaactggtccaggacaacaagatgatgacgatgctgaacctgagaggactgctaggcgactagcatggacagaagaggaagacattagattgataagcacttggttgattaactacaagactgacaagtactgggataaggttgcagcagaatacaacagtgcaacccccggagctcggagaagggaagtgaagcatttgaagaaccgctggcagaggatgatcaataaggtggcacatttcaatgattgttggtgccgggtcatggcaaaatatcctagtggccagtcagagggcatgcaacagatggacaaaacttggctgatgtataataaggaagcacatgtgatgtatctcgaagaagcgaagcataagttcacctttggccattgctggaacgctgtttgggaccaacccaagtggaaagaatacatctcttctttctccgcaaaaagagtgatgcgatctgagtccggtggttacgtgtcatcttcggaagactctgaagatatgcaagaaggaaaatgcttagtggatcctctggacatgcttcccaagaaccatgaagatatgacagaagtccagccgtctgtctcaaatcaaaagaagcaattagaactattgacagctgatgcgtcgtggcctattgaatttcagcttgggaggcaccaattgatgactggaacatcaaaattgaacgaacatcagcagggggtggcagtgagggatgaaatgcttgaaaaagaatcgggcccacaagattttgaggtgctagacaatgagagagtggcaagggaagatgaacctaaaaaagaaacacagcctcatcaaggtttcaaggcgcgaaaggtcaatcggaaacgtaaaggcaaggcatcatcttcttcatgtgaggtgcaggaagacatcaaacatgcattatatcttcagaccatgcttaacaatgatcgtgagaaaatgtcagaggtacagctccgcctctcgaaagagcagcttgaattggccagaataaagcaggatgaagcgaatgtaaagaaagaaacagcactttacatgaaatacacagagctgttgctggcagacacttcaaggtttgatgagtttcagaaggcagagtatgagaaagcattgaagcatataggagggatactatttagcaaggatgtcaattag</cdnaseq>

Protein Sequence

<aaseq>MGPHPPSSYSDKKTCQNVPPEKPSSTSFCHPQFPQHLLSHPAYA MNFPFPPFPHYPPYSQNFQYAVPPQYAPYSLPPPDGAMPSPYVPATVMPSKAPSDQGT PHSVTGPGQQDDDDAEPERTARRLAWTEEEDIRLISTWLINYKTDKYWDKVAAEYNSA TPGARRREVKHLKNRWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKE AHVMYLEEAKHKFTFGHCWNAVWDQPKWKEYISSFSAKRVMRSESGGYVSSSEDSEDM QEGKCLVDPLDMLPKNHEDMTEVQPSVSNQKKQLELLTADASWPIEFQLGRHQLMTGT SKLNEHQQGVAVRDEMLEKESGPQDFEVLDNERVAREDEPKKETQPHQGFKARKVNRK RKGKASSSSCEVQEDIKHALYLQTMLNNDREKMSEVQLRLSKEQLELARIKQDEANVK KETALYMKYTELLLADTSRFDEFQKAEYEKALKHIGGILFSKDVN</aaseq>

Gene Sequence

<dnaseqindica>3003..4082#2513..2920#attccgcctgaaccccacacccggattccgccgtcagccaaaaccctcgccgccgccgccggctgcatgcgtggtacctcggcaccggagaactcccctgtcctcctggccgtccgcgcgtagcctccgctctccgacgcagcgcccgcccgcccgcccgcccgcccgagcaccggcggcccttcgtttctccggcacctccgccgccgcgcgacgtcggttggtattccggaaacggcatctttacttcccaatcttaatttttatctcaaagagatctctcctcccgttgccgtgtaaatctcttgctcgcagtgttgcgatcttattgagtttttgtttttgttttctttaggagggatcgcaacaggaggccagaacacaagaattctgctggattaggtatttgtttttttttccccaaatcggattgcacgcttttgcagattatgcgtgtcgatttttgttatgataatgtaggtgttttttcttgctgctgtttgatacatatttgtcccagtaggcaaaataatgtggttaaattgtgcaattaaccaatctatatgtccatttatattcccaacttggcagatgacatgcatgtattttcccccaatctgcaggttattctcattgtggtctatgtacatctcaggttttgtttgggagaatattactttgtaagaccgtcagagagtgaataatggacctttgattcctctgtttttttttgagtgactgaaccatccatgtcatgtttttatggtaactgttttcttttatacgacatttgtttatatgacattgtggcctgtaggacagactattaggaagctccttcaaacaggtcgcactaaagttttggatgttgtgtggctaattaattgttatgtttggcataaaaccgataaatagtcaatattgagttgagtgatagcatcatgcacctcctgctttgttgaacagccagtgctttttcttcttgtatcacatcttattagttttcatgtttagttaattgagttgtggagatggattgctactttctaaaataacttgaccttcctcttctcccttgatttgtcttgtttttagaactgatgtttctatccagtctcttactctggtcctaccacaatatatgccacacttgaactgggaaaaataatttaggaggtgattatttctagttcatgttctgtttagcatgtcctttatgaaagatgaggtaattagttttccttaatattttgacattaaatttgcacaagtgagctagatcttatcattgtaaagaacaggtttatgttcttctatgattaacgagaatgtcatgtagaaattgtgcaagaacttcttgttacaaatggcatagcctttttttttccagaagccttactgtgaaaagaactgaaaaccagtatcaagactccaacagcgtctactttggtttgagagtgacgtttccggtgtaattgatcttgcatcaagttctatatttatatttaacgctgattcctttcaataaaatgtcacagttagcttttgaaaagaagaaatagcagattctgttccatataattgtaccttttggtctactttttatctgacaaatcttttccctgaatctgttgtctggagttacttaagacccatatgcatttgttccaagtgcatcacatttgttttccaccactggaatcagactaaattcattttgaccttactgttcaagttcgcatgttttgctagtgtaacaaaaaaaattgctgagatcattcttttttccaaaaaaaacggggtgtgagttggcagaggggaggggtgcatcacaggttttaatcaacagtaggcagatagttttttgccaactcagtgggcagttttatgcttgcctcgactgattcttgacttctcgatgggagcagcattttggtcactctccatggcccttgtggaaatgggaaatgattctttagtttgccctttcagctctagaaaatagatcctaactcaatacaattcaacgccaaaggaattaataagttatttgaactatttcattagtactgtattacaatttcttatcatttgtagtactacctccgtttcaggttataagactttctaccattgtccacattcatatagatgttaatgaatctagtacacatatatgtctagattcattaacgtatatatgaatgtgggcattgctagtaagtgtaataatatgaaacggacgaagtaaatctgattgtttacatgatttgaaatcttatttttacaacatatgtttctgcagggttgttgctctcctccaagtggcatccaacggaacagtaaatgaaattagagctgaacaagatatctcttgggtgtattcttatttatctgttgggaacttcaaccaaataggttctcagaattggcttcaaagttcaaacccatgtgctttctgctcgtttgacatacccactatatacatttcacaccattccactcatttgcaatggggcctcacccacctagtagttattcagataaaaaaacttgccaaaatgtcccaccagaaaaacccagctccacgagtttctgccatccacaatttccgcagcacttactttcacatccagcatatgcaatgaatttccctttcccgccgtttcctcactatcctccatactcgcaaaatttccaatatgctgttccaccacaatatgctccatactcattaccgccacctgatggagctatgccatcaccatatgtaccagctacagttatgccatccaaggcaccctctgatcaaggcaccccacattcagtaactggtccaggacaacaagatgatgacgatgctgaacctgagaggactgctaggcgactagcatggacagaagaggaagacattagattggtaagcattcctcttcctttttctatttctaatttttggacattgcaaatggtatcctaacatctccgtgctggaactacagataagcacttggttgattaactacaagactgacaagtactgggataaggttgcagcagaatacaacagtgcaacccccggagctcggagaagggaagtgaagcatttgaagaaccgctggcagaggatgatcaataaggtggcacatttcaatgattgttggtgccgggtcatggcaaaatatcctagtggccagtcagagggcatgcaacagatggacaaaacttggctgatgtataataaggaagcacatgtgatgtatctcgaagaagcgaagcataagttcacctttggccattgctggaacgctgtttgggaccaacccaagtggaaagaatacatctcttctttctccgcaaaaagagtgatgcgatctgagtccggtggttacgtgtcatcttcggaagactctgaagatatgcaagaaggaaaatgcttagtggatcctctggacatgcttcccaagaaccatgaagatatgacagaagtccagccgtctgtctcaaatcaaaagaagcaattagaactattgacagctgatgcgtcgtggcctattgaatttcagcttgggaggcaccaattgatgactggaacatcaaaattgaacgaacatcagcagggggtggcagtgagggatgaaatgcttgaaaaagaatcgggcccacaagattttgaggtgctagacaatgagagagtggcaagggaagatgaacctaaaaaagaaacacagcctcatcaaggtttcaaggcgcgaaaggtcaatcggaaacgtaaaggcaaggcatcatcttcttcatgtgaggtgcaggaagacatcaaacatgcattatatcttcagaccatgcttaacaatgatcgtgagaaaatgtcagaggtacagctccgcctctcgaaagagcagcttgaattggccagaataaagcaggatgaagcgaatgtaaagaaagaaacagcactttacatgaaatacacagagctgttgctggcagacacttcaaggtttgatgagtttcagaaggcagagtatgagaaagcattgaagcatataggagggatactatttagcaaggatgtcaattagtgccctcgcaacaatttatcttaagcatgcatttctgtgcaaatatcatcccaacaactagtaatagatcgttttgttctacttaactgaaggattgcctccactaacacctgtgtctgtgttaggtttaatcatctctagcaagatttaacagagattagtactgattgaatcgtggaagtgatggatcaatatgtatttagctattagtggcttatctaatttgcaactgacctgtgcaaagaatgaactagtggcttgtcttggagtgatggttgaaggcaaattgcaaatacttgaaagttaaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0317700, RefSeq:Os09g0317700