BGIOSGA028647

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Revision as of 08:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028647| Description = BGIOSGA028647| Definition = Oryza sativa Indica Group BGIOSGA028647, complete gene.| tag = | tid = BGIOSGA028647-TA|...")
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Gene Name

BGIOSGA028647

Description

BGIOSGA028647

Definition

Oryza sativa Indica Group BGIOSGA028647, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA028647-TA

Ensembl Protein ID

BGIOSGA028647-PA

Length

3372

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20704879..20708250

Sequence Coding Region

20704879..20705175,20705247..20705385,20705784..20705905,20706210..20706413,20706506..20706565
,20707150..20707288,20707402..20707520,20707711..20707935,20708056..20708250

Genome Context

<gbrowseImage1> name=IndicaChromosome08:20704879..20708250 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:20704879..20708250 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGCACGGAAACGTGTCGTGGGGCTGTGTCTTGTGGGTACAGTTGTACACCTCTGATCAGAGTAAAACTATTCGAATAGCCGTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGGGGATCTGTGCGGCTATCCGGCCCCGACGCGGCCCCCGTCGCGGGGCGCGTGTTCCGGCCGGCCAGGAGGGCGGTGCCGCCGTGGCGGCCGCGCAGCCATTTCGTCGAGTACGGGGTCGCGCTCGACCGCGATGGCGGCGTCATCGACGAGGTCTTAGTGGTGCCGATGCTAGCTCCGAGATCGTACACGCGGGAGGATGTGGTGGAGCTCCAGTGCCATGGGAATGACCTGTGCTTGCGGCGTGTGCTCAGGGCCTGCTTGGAAGCTGGTGCTAGGCTTGCTGACCCTGGTGAGTTCACTCTTCGTGCGTTTCTGAATGGGAGGTTGGACTTGGCACAAGCGGAGAATGTGTCAAGGCTCATTTCAGCCAAATCTGCAGCTGCGGCGGACTCAGCATTGGCTGGCATACAGGGAGGCTTTTCTGCACTAGTAAAATCACTGAGATCAAGGTGCATAGAATTGCTCACTGAGATTGAGGCCCGTCTAGACTTTGAAGATGAATTGCCTCCTTTGGATCTAACAATGCTGGTCAGCAAAATTAATGGTATGAGGCAAGAGGTTCAGGATGCTTTGGACACTGCTAATTATGATAAGCTGCTACAATCTGGTCTGCAGGTAGCAATAATTGGCCGCCCAAATGTTGGCAAGTCAAGTCTGCTGAATGCTTGGAGTAAGAGTGAAAGGGCTATTGTTACTGAAATAGCTGGAACCACAAGGGATGTAGTAGAAGCAAATGTCTCAATTCATGGCATCCCTATTACCCTTCTAGATACTGCTGGTATAAGAGAAACTGATGACATCGTGGAAAAAATTGGTGTGGAACGATCAGAAGCTGCTGCACTGGGAGCTGATCTGATTATTATGACAATAAGTGCAGTTGATGGGTGGACTGAAGATGACACTAAACTTATTGAGCATGTGTTGATCAGTAAGAAATCTTCAGGTGCTCCAGTGCCAATGGTCCTTGTAATCAACAAGGTAGATTGTGCACCATTTATTTCAGGAGAACAGTTTGAACAATTCCATGGAGTTTTCAAAAAACATGTGCAAACATGTGCAGTCACTGGTAAAGGCATTTCTGAGTTGGAGAAGGCTATAATAGAGGTCAGAGGTCTTGAGCCTGTACCATCAGAGGGACGGCGATGGACTGTAAATCAGAGGCAATTTGAACAGCTATTGAGGACCCAACAAGCTTTTACTAGGCTAGAGTCATCTATCAACGAGCAGTTGCCGATGGACTTCTGGACTATAGACTTGAGGGAAGCAGCATTGGCTCTTGCAACAATCAGCGGGGAGGATATCTCTGAAGAAGTCCTGAGCAGCATATTCAGCAAATTTTGCATTGGAAAATGA</cdnaseq>

Protein Sequence

<aaseq>MSAHGNVSWGCVLWVQLYTSDQSKTIRIAVPXXXXXXXXXXXXXXXXXWGSVRLSGPDAAPVAGRVFRPARRAVPPWRPRSHFVEYGVALDRDGGVIDEVLVVPMLAPRSYTREDVVELQCHGNDLCLRRVLRACLEAGARLADPGEFTLRAFLNGRLDLAQAENVSRLISAKSAAAADSALAGIQGGFSALVKSLRSRCIELLTEIEARLDFEDELPPLDLTMLVSKINGMRQEVQDALDTANYDKLLQSGLQVAIIGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEANVSIHGIPITLLDTAGIRETDDIVEKIGVERSEAAALGADLIIMTISAVDGWTEDDTKLIEHVLISKKSSGAPVPMVLVINKVDCAPFISGEQFEQFHGVFKKHVQTCAVTGKGISELEKAIIEVRGLEPVPSEGRRWTVNQRQFEQLLRTQQAFTRLESSINEQLPMDFWTIDLREAALALATISGEDISEEVLSSIFSKFCIGK</aaseq>

Gene Sequence

<dnaseqindica>1..297#369..507#906..1027#1332..1535#1628..1687#2272..2410#2524..2642#2833..3057#3178..3372#ATGTCGGCGCACGGAAACGTGTCGTGGGGCTGTGTCTTGTGGGTACAGTTGTACACCTCTGATCAGAGTAAAACTATTCGAATAGCCGTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGGGGATCTGTGCGGCTATCCGGCCCCGACGCGGCCCCCGTCGCGGGGCGCGTGTTCCGGCCGGCCAGGAGGGCGGTGCCGCCGTGGCGGCCGCGCAGCCATTTCGTCGAGTACGGGGTCGCGCTCGACCGCGATGGCGGCGTCATCGACGAGGTACACTACTGCGCGTTGGTTTTGTTTTGATTTGATTATCCGCGCGTGCTAAATCTCGCGATTCCTGTCAGGTCTTAGTGGTGCCGATGCTAGCTCCGAGATCGTACACGCGGGAGGATGTGGTGGAGCTCCAGTGCCATGGGAATGACCTGTGCTTGCGGCGTGTGCTCAGGGCCTGCTTGGAAGCTGGTGCTAGGCTTGCTGACCCTGGTTGGCTTCCTACTTAATCGATGGATATGTTGATTTCCCCTTCTTACCATGCTTGTCCTACAAATTTCTTAGCTCATAGAGCTAACAATGACAGATAATTTGTTGCTATATACTACCTCCATATTTTAATGTATGACGCCGTTGATTTTTTGTCCAACGTTTGACCATTCGTCTTATTCAAAAAATTTATGTAATTATAATTTATTTTATTGTGACTTGATTCTTCATCAAATATTCTTTAAGCATGACATAAGTATTTTCATATTTGCACAAAAATTTTGAATAAAACGAATGGTCAAACGTTGGTTAAAAAGTCAACGGCGTTATTCATTAAAATACGGAGGGAGTATGTTTTTTCAATGCATTACGGCTCATCGCCAAATTTATGTCTTTTCCAGGTGAGTTCACTCTTCGTGCGTTTCTGAATGGGAGGTTGGACTTGGCACAAGCGGAGAATGTGTCAAGGCTCATTTCAGCCAAATCTGCAGCTGCGGCGGACTCAGCATTGGCTGGCATACAGGTACGTGTGAGTATGTCATGAGCTTATGTTGTGGCAACTTGTTTTGGGTACACAAAAACAAAATAAAATATAGGTGGGGAAGTGTTAGAAAGGTTTGGGATTTAGCAGAGATACCGAATGGTTAAATACTCGAGAACAGGAAGTAACTGAAACTGTTGTTTCTTTCTGTAAATTTTGAAAATTTTTACATCACGAGCTTCAGTTCAGCTCCTTTGAGAAGCCCATTGTGGAAAGCTTTATTAAGAAACTGAATGCTTGCACAACATGCGTGGTGGTCTGAATTCTAAATATGTTTTGGATGCAGGGAGGCTTTTCTGCACTAGTAAAATCACTGAGATCAAGGTGCATAGAATTGCTCACTGAGATTGAGGCCCGTCTAGACTTTGAAGATGAATTGCCTCCTTTGGATCTAACAATGCTGGTCAGCAAAATTAATGGTATGAGGCAAGAGGTTCAGGATGCTTTGGACACTGCTAATTATGATAAGCTGCTACAATCTGGTCTGCAGGTATTTTCTTTGTATTGTATATTTCTATTTAAGGGTTGAAATAAAAACACGATGAATATGAAAATAAAAAATGATTTTATAATTTCTGGCAGGTAGCAATAATTGGCCGCCCAAATGTTGGCAAGTCAAGTCTGCTGAATGCTTGGAGTAAGGTATGTGCTTAGATATCCCTCCTATATCTTTTGCATAGTTAACCGTCGTGTGTTTTCCAGTTGTCTCTTTTTATGTTAGCATGCTCATGAAACCTATGTCCATACTAAGACACTGATGTGCATGCCCTATGCTCCTAATGCCATCTGATTTGTATGAGTAATTGTTTTACTTTGTGTAACGTCATGGGACCTAGATTCACTTGAATCCCAGATGTGGACGGGGTTGCGCATGCTTAGCAACTCGCTTGATCTTTTATCCTCACATAGGCCAACATGCACTTTTTGTCAGTAGCTTAGTACTGCTTACCAAATGGCACAGACCCATGGACTACATGAGCCACACATAAATTTGGACGGGTTTCACTTTGTTCCTTTTCAGCAAATTCTGAACTAAATACAAAACTAAAATTTGTTCTTTTTTCAGCAAATTCCTACAGTGTGGATAGTTAGGAGTAATGTTTGCAGTTCTCTTTTTTTTTTTCATGCACCACATTCCTTATACGTGGAATGCCATACGTGGTTGTGATTTCTCTTGGATTGCATCCAAAATAGTTGATATTGGAATTTAAATGATTAGCTTGCAGAGTGAAAGGGCTATTGTTACTGAAATAGCTGGAACCACAAGGGATGTAGTAGAAGCAAATGTCTCAATTCATGGCATCCCTATTACCCTTCTAGATACTGCTGGTATAAGAGAAACTGATGACATCGTGGAAAAAATTGGTGAGATATTATCTTGGAAATATTCAATGCTGCACAGTGCATACTTGTATAATGGTAAAGGCTTAGGCGCTTAGCTTGTCCTGACATAAGTCTTTAATTGGGCTCTTACACAGGTGTGGAACGATCAGAAGCTGCTGCACTGGGAGCTGATCTGATTATTATGACAATAAGTGCAGTTGATGGGTGGACTGAAGATGACACTAAACTTATTGAGCATGTGTTGATCAGTAAGGTACGTTCAGTTTCATCTTCTTGCCAGTTTTCCTGCCTTGTTCAGTATTGCTGCCTAGCTGACTTTGGTATAAGTTTTACGTTCCTTGTTCGGTAGTCCTTACAGTTATAGAACTCCTATTAGATATCTTGTCTGTGTCCATTCAACAGTACTATATAGTGACTATTTTATGTTCTCTTTTGAATATCAGAAATCTTCAGGTGCTCCAGTGCCAATGGTCCTTGTAATCAACAAGGTAGATTGTGCACCATTTATTTCAGGAGAACAGTTTGAACAATTCCATGGAGTTTTCAAAAAACATGTGCAAACATGTGCAGTCACTGGTAAAGGCATTTCTGAGTTGGAGAAGGCTATAATAGAGGTCAGAGGTCTTGAGCCTGTACCATCAGAGGGACGGCGATGGACTGTAAATCAGGTAGGTAACATAGTATTCTCAATAACAGAAGGGAAATAGTTCAGCTGTTAAGAAATTCAAAATGTTGCATATGCATGATGCTTTAACTGCTTGTGAAACTCTTTTGTATGCATTATGCAGAGGCAATTTGAACAGCTATTGAGGACCCAACAAGCTTTTACTAGGCTAGAGTCATCTATCAACGAGCAGTTGCCGATGGACTTCTGGACTATAGACTTGAGGGAAGCAGCATTGGCTCTTGCAACAATCAGCGGGGAGGATATCTCTGAAGAAGTCCTGAGCAGCATATTCAGCAAATTTTGCATTGGAAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028647

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028647&oldid=34904"