BGIOSGA028648

From RiceWiki
Revision as of 08:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028648| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028648, complete gene.| tag = P0453D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028648

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028648, complete gene.

LocusTag

P0453D01.16-1

Ensembl Transcript ID

BGIOSGA028648-TA

Ensembl Protein ID

BGIOSGA028648-PA

Length

2435

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20718369..20720803

Sequence Coding Region

20718369..20718845,20718922..20719065,20719359..20719599,20719784..20720284,20720394..20720803

Genome Context

<gbrowseImage1> name=IndicaChromosome08:20718369..20720803 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:20718369..20720803 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGCCCTCAGATATTTGGAAGGCGCATGCAGGGTCATCACAGTCAGAGGGATCAGCACTGGATATGGAGAGAAACGGATGCAACCATAACTGTTGCCCATCTCCTCTCCAACCAATTGCATCAGGTGGTCAGCACTCTGAAAGCAGCGCTGCATATTTTTCTTGGCCAACATCTACTCTAATGCACGGGTCTGCCGAAGGCCGCGCTAATTACTTTGGGAACCTACAGAAGGGTGTGTTACCTGGACATCTTGGCCGCTTGCCAACAGGGCAAAGGGCCACCACCTTGCTTGATTTGATGATTATAAGAGCATTCCACAGCAAGATCCTACGTCGCTTTAGTCTTGGTACAGCAATAGGCTTTCGAATCAAGAAGGGTACATTGACTGATACTCCTGCCATCCTTGTTTTTGTTGCTCGGAAGGTGCACAGGAAGTGGCTCAGCACTACACAGTGCCTTCCGGCTCACCTTGAGGGACCGGGGGGAGTGTGGTGTGATGTCGATGTTGTTGAATTCTCTTACTATGGGGCACCAGCACCAACTCCAAAGGAACAATTGTATGACGAGCTTGTTGATGGTCTGCGTGGTAGTGATCCATCTATCGGCTCTGGTTCACAGGTAGCTAGCCTTGAAACATATGGTACATTGGGTGCCATTGTGAAGAGTCGAACTGGTAATAAGCAAGTAGGCTTCCTGACAAACAGGCATGTTGCGGTTGACCTGGATTACCCTAACCAGAAGATGTTCCATCCCTTGCCCCCGAATCTTGGGCCTGGTGTATACCTAGGTGCTGTTGAGCGAGCAACATCATTTATCACAGATGATGTTTGGTATGGTATCTATGCGGGAACAAATCCAGAGACATTTGTCAGAGCTGATGGTGCATTTATACCGTTTGCTGATGATTATGACATAACTAGTGTTAATACCTCAGTCAAAGGAGTTGGAGTCATAGGTGATGTAAAGGCAATCGATCTACAATCCCCAATTAGCAGTCTCATCGGAAGACAGGTTGTCAAAGTTGGAAGAAGCTCTGGTTTGACGACAGGGACCGTTGTGGCATACGCTCTTGAATACAATGATGAGAAGGGCATATGCTTCTTCACAGACTTTCTTGTTGTTGGGGAGAACCAACAAACATTTGATCTTGAAGGGGATAGTGGAAGCCTTATAATCTTAACAGGAAAAGATGGCGAAAAGCCACAGCCCATAGGGATTATATGGGGTGGCACAGCCAATCGGGGGAGGTTGAAGCTCAAAAGTGGCCAGGGTCCTGAGAACTGGACAAGTGGGGTTGATCTCGGACGGCTTCTGGATCTATTGGAGCTTGATCTAATCACTACAAGTGAAGGACTACAAGAGGCCCTAGAGGAACAACGAATTATTCTAGCTGCTGCTGCAGCAGCAGCTAATTCAACTGCTGGGGAATCGTCACCTGTTGCTGGTCCTCAAGAAAATGAGAAAGTTGACAAGATTTACGAGCCTCTTGGAATCAACATCCAACAGCTTCCAAGAGACAATTCAGCCACCTCCACAGGACCCGATGAGTTCCATGTCGACACGGTGGAAGGCGTCACCAACGTCGAGGAGCGCCAATTCCTCATTGGCATGTCTCCAGCACGCGAAGGCCAAGAAGCCAATGGCGACCTGAACAACCTTGCGGAGCTAGAGAATTCACCTGAAGACATTTGCTTCTCCCTGCATCTGGGCGAGAGGGAGCCCAAGCGACTCCGCTCCGATTCGTCGCTGGACATAGACTTGCAGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MRPSDIWKAHAGSSQSEGSALDMERNGCNHNCCPSPLQPIASGGQHSESSAAYFSWPTSTLMHGSAEGRANYFGNLQKGVLPGHLGRLPTGQRATTLLDLMIIRAFHSKILRRFSLGTAIGFRIKKGTLTDTPAILVFVARKVHRKWLSTTQCLPAHLEGPGGVWCDVDVVEFSYYGAPAPTPKEQLYDELVDGLRGSDPSIGSGSQVASLETYGTLGAIVKSRTGNKQVGFLTNRHVAVDLDYPNQKMFHPLPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVRADGAFIPFADDYDITSVNTSVKGVGVIGDVKAIDLQSPISSLIGRQVVKVGRSSGLTTGTVVAYALEYNDEKGICFFTDFLVVGENQQTFDLEGDSGSLIILTGKDGEKPQPIGIIWGGTANRGRLKLKSGQGPENWTSGVDLGRLLDLLELDLITTSEGLQEALEEQRIILAAAAAAANSTAGESSPVAGPQENEKVDKIYEPLGINIQQLPRDNSATSTGPDEFHVDTVEGVTNVEERQFLIGMSPAREGQEANGDLNNLAELENSPEDICFSLHLGEREPKRLRSDSSLDIDLQK</aaseq>

Gene Sequence

<dnaseqindica>1..477#554..697#991..1231#1416..1916#2026..2435#ATGCGGCCCTCAGATATTTGGAAGGCGCATGCAGGGTCATCACAGTCAGAGGGATCAGCACTGGATATGGAGAGAAACGGATGCAACCATAACTGTTGCCCATCTCCTCTCCAACCAATTGCATCAGGTGGTCAGCACTCTGAAAGCAGCGCTGCATATTTTTCTTGGCCAACATCTACTCTAATGCACGGGTCTGCCGAAGGCCGCGCTAATTACTTTGGGAACCTACAGAAGGGTGTGTTACCTGGACATCTTGGCCGCTTGCCAACAGGGCAAAGGGCCACCACCTTGCTTGATTTGATGATTATAAGAGCATTCCACAGCAAGATCCTACGTCGCTTTAGTCTTGGTACAGCAATAGGCTTTCGAATCAAGAAGGGTACATTGACTGATACTCCTGCCATCCTTGTTTTTGTTGCTCGGAAGGTGCACAGGAAGTGGCTCAGCACTACACAGTGCCTTCCGGCTCACCTTGAGGTATACGGATCATGTGGTTTAGCAATATATTTAGGTCATATGCAATTACATAATGAATTTACTGTGTCATACATAGGGACCGGGGGGAGTGTGGTGTGATGTCGATGTTGTTGAATTCTCTTACTATGGGGCACCAGCACCAACTCCAAAGGAACAATTGTATGACGAGCTTGTTGATGGTCTGCGTGGTAGTGATCCATCTATCGGCTCTGGTTCACAGGTTATATTGCCTTTTCATGTTGAAGTTACCATTTTCTTGATTCTGCATGACAAAACAGATAGGTTAATACTGCATCTTTCTTTGACTGTTTTATCAGGTTGGCCATTCTTAAGTACTCGTGTTTTTATTTATATATGTCCTTCTTTGCTGAGAAAAGATTATTTCTGCTCTTTTTCGTTGCAATATATTTTCCCTGTAGAGCACAATATATTTAGTTCACTTCTGTACGTACGCACCCAACTTCATGAAATTGACACAGCTAACTTGCATTTGTTTCTTTTTTTAATCTTCAGGTAGCTAGCCTTGAAACATATGGTACATTGGGTGCCATTGTGAAGAGTCGAACTGGTAATAAGCAAGTAGGCTTCCTGACAAACAGGCATGTTGCGGTTGACCTGGATTACCCTAACCAGAAGATGTTCCATCCCTTGCCCCCGAATCTTGGGCCTGGTGTATACCTAGGTGCTGTTGAGCGAGCAACATCATTTATCACAGATGATGTTTGGTATGGTATCTATGCGGGAACAAATCCAGGTAACATTTTGCTCTGCCAGAACAATTTATTTCTGGAGCCTTCATGTTTTGGCATATGGTTGCAGCTTGTAGCATCTTGTGCCAGATCCTTGTTAAAATGCATTAACTTCTGCTCATTGCTTCTTTAGCTGTCATCTAATTTTTCATAACATATTTGTTCTGTAACAAATCATTTAATCTGCAGAGACATTTGTCAGAGCTGATGGTGCATTTATACCGTTTGCTGATGATTATGACATAACTAGTGTTAATACCTCAGTCAAAGGAGTTGGAGTCATAGGTGATGTAAAGGCAATCGATCTACAATCCCCAATTAGCAGTCTCATCGGAAGACAGGTTGTCAAAGTTGGAAGAAGCTCTGGTTTGACGACAGGGACCGTTGTGGCATACGCTCTTGAATACAATGATGAGAAGGGCATATGCTTCTTCACAGACTTTCTTGTTGTTGGGGAGAACCAACAAACATTTGATCTTGAAGGGGATAGTGGAAGCCTTATAATCTTAACAGGAAAAGATGGCGAAAAGCCACAGCCCATAGGGATTATATGGGGTGGCACAGCCAATCGGGGGAGGTTGAAGCTCAAAAGTGGCCAGGGTCCTGAGAACTGGACAAGTGGGGTTGATCTCGGACGGCTTCTGGATCTATTGGAGCTTGATCTAATCACTACAAGTGAAGGACTACAAGGTTTGTGCTTTCTTAAAACTGAAATCTCTACCACAACATGATATTTAGTCCTTTCGGTTGTAACAAATAACTGAGAAATTCCAATGGAACTCTTTGATCTTTGGTACAGAGGCCCTAGAGGAACAACGAATTATTCTAGCTGCTGCTGCAGCAGCAGCTAATTCAACTGCTGGGGAATCGTCACCTGTTGCTGGTCCTCAAGAAAATGAGAAAGTTGACAAGATTTACGAGCCTCTTGGAATCAACATCCAACAGCTTCCAAGAGACAATTCAGCCACCTCCACAGGACCCGATGAGTTCCATGTCGACACGGTGGAAGGCGTCACCAACGTCGAGGAGCGCCAATTCCTCATTGGCATGTCTCCAGCACGCGAAGGCCAAGAAGCCAATGGCGACCTGAACAACCTTGCGGAGCTAGAGAATTCACCTGAAGACATTTGCTTCTCCCTGCATCTGGGCGAGAGGGAGCCCAAGCGACTCCGCTCCGATTCGTCGCTGGACATAGACTTGCAGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028648