BGIOSGA028649

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Revision as of 08:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028649| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028649, complete gene.| tag = WDRP-L|...")
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Gene Name

BGIOSGA028649

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028649, complete gene.

LocusTag

WDRP-L

Ensembl Transcript ID

BGIOSGA028649-TA

Ensembl Protein ID

BGIOSGA028649-PA

Length

5704

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20767802..20773505

Sequence Coding Region

20767802..20767942,20768057..20768225,20771445..20771569,20772127..20772261,20772354..20772458
,20772543..20772634,20772722..20772827,20773092..20773505

Genome Context

<gbrowseImage1> name=IndicaChromosome08:20767802..20773505 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:20767802..20773505 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGAGAATCCGCTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCCAGGGGATCCCCTGGGAGAAGATTGTGTTCCGGAGGGATCAGTATCGGGAGATGAAGATGAAGAATTACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGTCAGCTTCTTAAAATCTCTTCCTGTTTATGTTATACAGGACTGCAAGAAAGTTGAAAAGGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCATTGGACCAGACAAGTACTGAGCTAATCAATGCGGATGACTGCATTATACCAAAACAGAGAGGGCATGGTTCACAGTCCGTTGCAATGGTCCAGGTCACAACTATGGCTGTAGATGATAGTTTATTGGTAATTGGTGGTTTTCAGGGGGAGCTTATATGCAAGCGCCTGGAAGATGATGGAGTTCTTTTCAGCACAAGAGTTACAGATGATGAGAATGCTATTACCAACTCTTTGGAGATATATCAGGATCCCACTGGATCTAGACGGTTGGTGGCTGCTAACAATGACTGCTCTGTCAGAATTTTTGACATTGAGTACTTTGATTTGCTGAAGCACCATGTCTTCCCATGGTCTGTGAATGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGGCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MDEFELEDNLELLLQSIQELIEDQGENNPFGAANHDELIASLLHNNQENPLTDVSVEDVRDGKDMPGDPLGEDCVPEGSVSGDEDEELQELSEPELCPGGSSEVSFLKSLPVYVIQDCKKVEKDSPYYDFQYNTRRARPSIVHFQLRNLVWATTKHDVYTVHNQSVTHWSSLDQTSTELINADDCIIPKQRGHGSQSVAMVQVTTMAVDDSLLVIGGFQGELICKRLEDDGVLFSTRVTDDENAITNSLEIYQDPTGSRRLVAANNDCSVRIFDIEYFDLLKHHVFPWSVNAIGALKGHLDYSFASAWHPDGNILATGSQDTTCRLWDIRNLSESVAVLGGRMGSIRCIKFSSDGRFLATAEPVDFVHIYDSYADYGRSHEIDLFGEIAGLSFSPDAEALYVGIADPTYGGLIEFNRRHQHHYLNCMW</aaseq>

Gene Sequence

<dnaseqindica>1..141#256..424#3644..3768#4326..4460#4553..4657#4742..4833#4921..5026#5291..5704#ATGGACGAGTTCGAGCTGGAGGATAACCTAGAGTTACTCCTCCAGAGCATCCAGGAGCTCATCGAGGACCAGGGGGAGAACAACCCCTTCGGCGCGGCCAACCACGACGAGCTCATCGCTAGCCTCCTCCACAACAACCAGGTGCGACGCCGCCGCCGCCGCCAGCGCTGGTGCTTCCCAATTGCTGCGGTTGCGGTTCCACATGCGGTGGAATTAAGTTTCTGTTTATTTATTATTTTTTGTGTTGCTTTGCAGGAGAATCCGCTGACTGATGTGTCCGTGGAGGACGTTAGGGATGGGAAGGACATGCCAGGGGATCCCCTGGGAGAAGATTGTGTTCCGGAGGGATCAGTATCGGGAGATGAAGATGAAGAATTACAGGAATTATCAGAACCTGAGTTATGCCCGGGAGGAAGCTCTGAAGGTACCTTGTTTATGCTCTTGGACTATCCTTTTATTATTTGTCGAATCACTTAGGCAAGCTATGGTGTGAGGTTCATGATGATCCATTAGGCAATTAGAGTGTCCAACGTCTCAATCTGTGTCATCAGTTCTTGAGTTCAAAATCATGGGAACATGATAGGCTGCATTATGGGCATGATAGTATGGGAAAAAAAACATAAACGGGTTGAAATAAACATATTGTGCATGTGCTATTGTGCTACATGCTTGTGTATTGTGGAGACACTTATGTGCATAAAGTCCTAAACAAATGTTTCTATGTGGTAGTTGGAATGCCTCAATTGCCTACTAGCATACTAGGCATATAGATACTAGTTTGTATGAGAATTTGATGCTTGTTATTTATTTTCCCCCTGTAGAATGGATGTGTGTTACTTGGTTTAGTTTTCAGTAAATCTTAAAAAGTTGGCTATTGGATTGCACATAATCTACAGTAATACAGATAAATGCCAACTTTTTATTTAAATCTTGAGTATCTACTTTGTCGATCCCCCCCCCCCCCCCTGTTTTCGATAGTTTGTCAATATAAATGGAGGAATCTCATGTCATTCTTTTTCTCCAGTAACTGCTTAGATTTTCTGAATGAGCAATCCTCATGTGTTGTTTGGCTGATCCCATGAAGTGCCAAGTGTTCTGTAATGAATGATTCCAGCTATGACTGGTTACCTCCAAACATTAACATACACATAAAATATACGAGTATATACTAAATTGCTACTGAACACCATTAGTTACCTACTGACCTGTTACCACCATGCGAGTCAATCCATTTTATGGGCAGCTTATCCAAATGCCATGGCATACTCAAGAGTTCAGACAGCCAATCAAACACAACATGTAGATGATTTATGGTGGTTTGTGTGCTTATGAGTTATGAGTGCTCATCCATCATGGTGTTGATTACTTATCCTGCATTAGCTATTTAGGGGTTTATTTGATTAGGTGTACATGTGATAGCATGAAATCTTGTTCCCATAATCCCATTACTTAGGGCTTCTTCTGAACGCAGGGATTTTACAGGAAACAGTTTAGCTCCGCCAAAATTCCCGCGAAAATCCTCCAAACCGAATAGGCCCTTAAATTGTTTTCTTTATATGTTTACATGGTTTTTATGTTGATTGTGTTTAGTTGATTATAAACCTCCTCTCAATTGTTTCTATTGAAATTCAACCTTTTGAAACAATTGAAATTCAACCTTTCGTTTCACATAGCAAATTGATACTTACAACCATCACTAGTTCACTTAGTCATCAGTCATGAATGTCATGCCTTAATATATTTAGCATGAGCCACCCTTGGACTCGGTGTTGATAGCTGTTCATACTCAATTAATCAATCTCTTAAGTATCACTGCTCACCACTAACAATTGATGATCACTAGTGACGAACAAAAGATAACATTAAGAATGAGCTTGTCTTGTAACCATCTGAAAAATATAACTCATGTATGAAAACGTTTACCTTTTAACATGATATAAATGCATAAAGCATATTAAGGTAACATTCCAAAATCCTTTCTCCATTTCCTATCATGGGTTTTCTCAGCACACCAAATAGTCAAACAGTCTGTCCCTCATTTGTCATTTGCATCAGTGGCTGCAGGGATGATCTTATTTATTCAAGTGAACTCCCTTATGCGTGGTTCATTAATATTGTAGAGTTAGCCTTATGAGATTCTTCATTGATGTCCAATGATCTATGCATGGCACATAATCAGTTGTCTGTGATAGAGTTTGAAAGAAATGCTGGAAGGTTTTCACATTTTCACACAGATAATCTAGTAAAATTAACATTAGAAAGCAAGCATTAAGGAGATTTTATTTAATCTACTCTCTTCATTGGAGTTAATATAGGTGTTTGATGATTCTGGTCAGGATCTTTTTCCCCTAATCCCCTATTATCTGCATTCTTTTCTATTACGATGTTGGCAAATTACATCTATTAATGTTTGTAAAGCTAGCTTGAATTAAAATTTTGGATGATATGCATGGGCCATAGATGAATCTATAAAATCCAATGGAATCATTATGATCGTTGTAGTTTTGTATCTGTATCATTATATGCACTTCAGATAGTTGGAGATATCCACTTTCACATTATTGACCTGTCATTTGTTTAGGGCAACATATGTAAAGACAGTATCAATTTGGGGTAGGGTAATTATTTCCTCTTATATTCATGAAATCAGAGAAATTCTGATAATCCTGCCACATCCCAGAAGTTAAGTTATTTAGGTCAATTTGAATCAAAAGGAGTATTTTAGAAAGAATTGTATGCTGTTGATTTGACTGAATGTATTGTACTAACTCCCACTTAAAAGTTATGTGAGCTATGGCAATTTTAGTATTTTCTTTTTAATCGATAAAAAAAACCTCAAAAGATATACATGAAGCCCAAGGTTGATCAAACCTCCTTAAGGAAACACTGTTTAAATCTATAGTTATATGAACTTTTGTCATGTGACTCATTTTTGTCATGTTCTCCTTGATAAATATTGTTTAGCAACTGTTGTCTAAAGTATGATAATAGTTATGTACTTAGAGCGTTAGACATGAAATGAATATGCTGACGTGTATAAAATGGGTTGCAACATTTATGATGTTCCTGACATGATTTTCACACTGTATTATTCTTACCCGACTGAAATTACCTAAAACCAGGATGCTTTCCTTGTGTGAACTCAGACAATTGATCCCTCACAAACAGTTGGAACAATCATTTCTTACTTTCTGCTTAAACTATGAACTGTTTAGCATGGAAAACAGGTGGAAATACTGTTAAGACTTTTTTTTTTTTGGTTTTGCTGCAAGTTTCTTTGCACCTTAATGTGTAACTGTAACTACATGCAACTATCTGTAGAAACAATTAATTCTTAGGGACTGAGGAGGAAAGTTGTTTCTATTGTTTGCTGTTGTTTAGGGACAGGAAGATAGCTGTGTTTATATCCAATTAATTTCATATGATATATGTAGGGAACCAATTTTCAAAAGCCTTTGTGTAGTAGCACACCAACCATAGGTTGTTGCATGAGCTCATATAATGTGTTAACGGAACTTCTCCACAAGTCCTTAGTCTTTGTTTACTAACTTTATTGTTATGGTTACAGTCCAGCGCCTACTGTTGGAAATTCACAGTACAGTCAAATCCTGAAAAATAATTTATATCATCATTTGCTTGTCAGTCAGCTTCTTAAAATCTCTTCCTGTTTATGTTATACAGGACTGCAAGAAAGTTGAAAAGGATAGTCCTTACTACGATTTCCAGTACAATACAAGGCGTGCTCGCCCATCAATTGTACATTTTCAGGTTTGTAATCACTCTGTTGACATTCCAATATCTGTAGCTCAGTTATGCCACGGTTGATCTTATTTGAACTTGACCAGCCATGTTGTCCTTTGGTACTACTTGGTCATAGCAGTAAATGATAAACCTTTTCAAAATATCTGGCTTGTAGAGATCATATAGGTCCTAATAGGAATTGATGGAAAAGAAGTTGCAGGTAGTTGTTAAGAGTTACAATATATCTGTGAAAAGTTTTACCATCAATATAGTGAACTCCCAATAATTAACATTTTAATAGTTATTTCGGCAAGTGGCATAACTTTTGCTGAAATGACACACAAGACAAGATATCGAAGGAACAACTTTATTTTACTGTTAAAAGATGGATGGACTAAGTGTTGAACGTCCAACATGCTAGATGTGATATCATTCTTCTATACATGCATGCATCAAAATACATCAATCTGCTACTTTTATGTCATCAAGGAACACTAGATCTACTCATAGATCTCAATATAAGACAGAATAGTTCCTGCATAGATAAATGGATGTGGTTTCTAGTTCTGATTTTAAGTTTTCAGTTAAGGAATCTGGTCTGGGCAACAACCAAGCATGATGTTTACACGGTGCACAACCAATCAGTGACACATTGGTCATCATTGGACCAGACAAGTACTGAGCTAATCAATGCGGATGACTGCATTATACCAAAACAGGTACCTACTCCATCCATAGCCTTAGCTCTCATTGTTGTTGACTCATCATCTCGTTGGTCCCTAACTTGCAAAATTATCTTCTTTGTGGACAGAGAGGGCATGGTTCACAGTCCGTTGCAATGGTCCAGGTCACAACTATGGCTGTAGATGATAGTTTATTGGTAATTGGTGGTTTTCAGGGGGAGCTTATATGCAAGGTATCTTCATAGAAAAACATATACTTAAACTTTGCAATTTCATCTAGTAACTTGCAAACTGACAAAATTCTTTGGTTTTAATAGCGCCTGGAAGATGATGGAGTTCTTTTCAGCACAAGAGTTACAGATGATGAGAATGCTATTACCAACTCTTTGGAGATATATCAGGATCCCACGTAAGACTTGTTGCTTTTGGAGTTAGCATGTTTTTACTTCCAGGCCTTGTAACAACTCTTAACAAATGTATGTTTTGATATTTTCAGTGGATCTAGACGGTTGGTGGCTGCTAACAATGACTGCTCTGTCAGAATTTTTGACATTGAGTACTTTGATTTGCTGAAGCACCATGTCTTCCCATGGTCTGTGAATGTAAGTAGCCTCTCTATACTTGTTTATCCCCTTGGTTATGTGCCTTCTTTTGTCTCCCAAGTCTCAGATTTTAGTTTTCAATCAGAGCGTTTCGGTGAGCCCAAAAGGGGGGACTGTTTGCTGTCCTTGGGGACCATAAGGATGGCTTGGTAGTGGATCCCAAGTGTGGCAAGGTAAGTGCATGACTATTTTGACCCAATGTGTGAGGTTGTAGCGGCTTCTGATTTTTTTTATCTTAATCTGTAATTGCTTCTCTTGCTTTAGGCAATCGGTGCACTTAAGGGTCACTTGGATTACTCTTTCGCATCTGCCTGGCATCCTGATGGCAATATCTTGGCTACCGGCAGTCAAGATACAACCTGTCGGCTGTGGGACATTAGAAACCTATCAGAGTCTGTGGCTGTACTTGGCGGAAGGATGGGCTCGATACGTTGCATCAAGTTCTCTTCAGACGGGCGGTTCTTGGCTACTGCAGAACCTGTGGATTTCGTCCATATCTACGATTCATATGCAGACTATGGCAGATCTCACGAGATTGACTTGTTTGGAGAGATTGCTGGATTGTCATTCAGCCCAGACGCCGAGGCCTTGTACGTTGGCATAGCAGATCCAACATACGGTGGCCTCATAGAGTTCAACAGGAGGCACCAACATCATTATTTGAACTGCATGTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028649