BGIOSGA028653

From RiceWiki
Revision as of 08:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028653| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028653, complete gene.| tag = P0042B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028653

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028653, complete gene.

LocusTag

P0042B03.17

Ensembl Transcript ID

BGIOSGA028653-TA

Ensembl Protein ID

BGIOSGA028653-PA

Length

2924

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20886030..20888953

Sequence Coding Region

20886030..20886296,20886389..20886529,20886611..20886682,20886776..20886874,20886966..20887019
,20887155..20887256,20887436..20887513,20887716..20887785,20887913..20888076
,20888888..20888953

Genome Context

<gbrowseImage1> name=IndicaChromosome08:20886030..20888953 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:20886030..20888953 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGAAGCAGAGCGTGGTGCTGCCGGAGGTGGCGGTGCCGGTGCCGCCCAACTCCGCGCCGCTGCTCCCGTACCCGCCGCCGCGGGCCGCGCCGGGCGTCGCCGTGCGCAAGAAGTACCTCCAGGCGCAGCTCGACCTCGGCGCGGGCCTCCCGCTCATCAACGGATGGGTGGAGTCCATGCGGGCCTCCTCCCCCACCCACGCCAAGGCCGCCGCCGCGCTCGCCGCCGCCGGCGCCGTCGACGACGAGCGCGCCGCCTGGATGGTGAGGCACCCGTCGGCGCTGAGCAAGTTCGAGCAGATCGTGGCGGCGTCCAAGGGGAAGAAGATCGTCATGTTCCTCGACTACGACGGCACGCTGTCTCCCATCGTCGACGACCCGGACTCCGCCTTCATGTCCGACACGATGCGGCGGGCGGTGCGCAGCGTCGCCAAGCACTTCCCGACGGCGATCGTCAGCGGCCGGTGCCGCGACAAGGTGTTCGAGTTCGTGAAGCTGGCGGAGCTCTACTACGCCGGTAGCCATGGCATGGACATCAAGGGCCCCGCGAAGGCCTCCCGCCACAACAAGGCCAAGGCGAAAGGCGTTCTCTTTCAGCCGGCTAGCGAGTTCCTCCCCATGATAGAACAGGTGCACGATTCTCTGATAGAAAGGACCAAGTGCATACCTGGAGCCAAGGTGGAGAACAACAAGTTCTGTGTGTCTGTCCACTTCAGATGTGTCGATGAAAAGAGCTGGAGCACATTGGCTGATATAGTGAAGGCAGAGCTCAAGGACTACCCCAAACTGAAGCTCACGCAGGGGAGGATGGTGTTCGAGATCCGGCCCACCATCAAGTGGGACAAGGGCAAGGCCCTCGAGTTCCTCCTCGAGTCGCTAGGGTTCGCCGACTGCACCAACGTGCTGCCGGTGTACATCGGCGACGACCGGACCGACGAGGACGCGTTCAAGGTGCTCCGCAAGAGAGGCCAGGGCATCGGCATCCTCGTGTCCAAGTACCCCAAGGACACCAACGCCTCCTACTCCCTGCAGGAGCCAGCCGAGGTGATGGAGTTCTTGCTGCGGCTGGTGGAGTGGGAGCGCCTCTCCCGTGCTCGCCCCAAGTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MTKQSVVLPEVAVPVPPNSAPLLPYPPPRAAPGVAVRKKYLQAQLDLGAGLPLINGWVESMRASSPTHAKAAAALAAAGAVDDERAAWMVRHPSALSKFEQIVAASKGKKIVMFLDYDGTLSPIVDDPDSAFMSDTMRRAVRSVAKHFPTAIVSGRCRDKVFEFVKLAELYYAGSHGMDIKGPAKASRHNKAKAKGVLFQPASEFLPMIEQVHDSLIERTKCIPGAKVENNKFCVSVHFRCVDEKSWSTLADIVKAELKDYPKLKLTQGRMVFEIRPTIKWDKGKALEFLLESLGFADCTNVLPVYIGDDRTDEDAFKVLRKRGQGIGILVSKYPKDTNASYSLQEPAEVMEFLLRLVEWERLSRARPKW</aaseq>

Gene Sequence

<dnaseqindica>1..267#360..500#582..653#747..845#937..990#1126..1227#1407..1484#1687..1756#1884..2047#2859..2924#ATGACGAAGCAGAGCGTGGTGCTGCCGGAGGTGGCGGTGCCGGTGCCGCCCAACTCCGCGCCGCTGCTCCCGTACCCGCCGCCGCGGGCCGCGCCGGGCGTCGCCGTGCGCAAGAAGTACCTCCAGGCGCAGCTCGACCTCGGCGCGGGCCTCCCGCTCATCAACGGATGGGTGGAGTCCATGCGGGCCTCCTCCCCCACCCACGCCAAGGCCGCCGCCGCGCTCGCCGCCGCCGGCGCCGTCGACGACGAGCGCGCCGCCTGGATGGTCCGTGCATTTCTTTTTCATCGATTCTTGCGTCGCCGGTGCATGCTCTGTTTTACTGAAATGGGCGCTGGTTGTCTCTGATCGGTGTGCAGGTGAGGCACCCGTCGGCGCTGAGCAAGTTCGAGCAGATCGTGGCGGCGTCCAAGGGGAAGAAGATCGTCATGTTCCTCGACTACGACGGCACGCTGTCTCCCATCGTCGACGACCCGGACTCCGCCTTCATGTCCGACACGGTAACCACCCACGCATCGAACACTTCAACCACACCGCCGTCCACGATCGAGCTCACTCAATCTCTCTCTCTTCTCCCTCAGATGCGGCGGGCGGTGCGCAGCGTCGCCAAGCACTTCCCGACGGCGATCGTCAGCGGCCGGTGCCGCGACAAGGTACACACATTATCCCCAATGCCATCCCAGGAGATCGGTGGGTGCAGCGCTATGTTCTGAGTTCAGATTCTTGCCGTGTCCGTGCTTCGTCAGGTGTTCGAGTTCGTGAAGCTGGCGGAGCTCTACTACGCCGGTAGCCATGGCATGGACATCAAGGGCCCCGCGAAGGCCTCCCGCCACAACAAGGCCAAGGTGAGCATCCTCCACTGCCGCACTTGTCAACCACAGCGAGGAAAAGCAAAACTTATCTTTCTCTGCTTTTGCACCTCTGTGTGATTCTCAGGCGAAAGGCGTTCTCTTTCAGCCGGCTAGCGAGTTCCTCCCCATGATAGAACAGGTTAAAACATAGTACTACTGCTGCGACGCAATTATGCAAACTATAGCTGAAGGAGAAGTTTAGCTTTTTTTCTTTTAATTTTTGGGTTCGATCTGATGTTAAACTTGGTTAATTGTGGTGTGTATAATTTGTTAGGTGCACGATTCTCTGATAGAAAGGACCAAGTGCATACCTGGAGCCAAGGTGGAGAACAACAAGTTCTGTGTGTCTGTCCACTTCAGATGTGTCGATGAAAAGGTGCGGCACAACACAATTAGTGTGTGAGCCCCATCCTAAAATTGTCACTATTCAGCAGTAATAATTATTATTAGTACTATTAGAAAAAGAAGACATCAACTAATCATCAGCCTCTTCGATCTCCTTAATTTGTTTCTCTCTGTAACTAGATGATCAATTAACCGATTTCATGCATGCAGAGCTGGAGCACATTGGCTGATATAGTGAAGGCAGAGCTCAAGGACTACCCCAAACTGAAGCTCACGCAGGGGAGGATGGTGAGTTTTTTTTTTTCTTTCAAATCTCACTCTCTTTTCTTTTCTTTTTTCTTTTTTTTTTGTTTCTGCAGACATGTGTAGCCATCAATCGATTCTTTGCTAGGTAGAGATATATGCTTATTATTATTAAGCTTTGATATGTTGCGGCCGTGAGACGATCACTGAGTCATTGTCCTCCGATCATTGGATGCTTCTCCTGTAGGTGTTCGAGATCCGGCCCACCATCAAGTGGGACAAGGGCAAGGCCCTCGAGTTCCTCCTCGAGTCGCTAGGTAATGGAATTTTTTCTCTTTTTTTTTTTGTTCAGGCTTAATCTGTCGCCGTCGTCTTCTTCTTCCCTGGGCTTGGCACTGATTGTTTTGTGTGCTCGTTGTGAAACGAATAATAAAAATAATGCAGGGTTCGCCGACTGCACCAACGTGCTGCCGGTGTACATCGGCGACGACCGGACCGACGAGGACGCGTTCAAGGTGCTCCGCAAGAGAGGCCAGGGCATCGGCATCCTCGTGTCCAAGTACCCCAAGGACACCAACGCCTCCTACTCCCTGCAGGAGCCAGCCGAGGTAATGACCACCCCCCTTGCATTTCTTTCAATTTTTCTTTCTGATTTCTCATCTCAAAACTGTCAACACGTACATCACACAAAAATGTTCAGATCTTTTTTTAGAAAAGAAAACTCTTCTACTTTAAATAAATAAAAACGCAGTCGTCCTTATTCCATCCCCTCCTGATCACCTCATGTTTCTCATGTTTCTTCTTGGGTGTGTAACAATTATAGGATCCTATTTTATTATCAATCTACCCACCCAGCCAATTCACGATAATATGGGCTTAGCTCGTGCTTTATCTCAATCCACACATCCTGTAAATCCCAAATTATATGGTTTGGCCCGTTGTAAATCACTTCTAACTTTTCCATCGCATTAAAACTTTTTCTTCAAACTTTCAACTTTTCCATTAAATTAAAACTTTTCTACACACACAAACTTTTAATTTTCCATCAGATCATTCTAATTTCATTTAAACTTTCAATTTTGACGTGAACTAAACGCGCCCGTAGTAAAAGAGATGAAAAAGGAAAGGAAATACTAGTACACTACACTGTTATGTTCTACTGGCGCGGCGCTGCGCGCGCGTCGCGGCTATTATTATTATCTTTAGTCGACGTCAATGCGCGCGAAGCTTTCGTTCCCGGGGACCACCGCGCGCCGCGGGGGACGGACAGCCGGCGCCGTCGGTGTCGACCGGTCGGTCGACTCGGGAGGGCGGCGCGGCCCGGCGTCCACCAACTTGTTTCTGCACTGCACCAGCACCACCGTGTGTTTTCTACTCCGGCTAAAATTTTTTTTTCTCCCATTTTCTTTTCTCTTGCAGGTGATGGAGTTCTTGCTGCGGCTGGTGGAGTGGGAGCGCCTCTCCCGTGCTCGCCCCAAGTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028653