BGIOSGA028655

From RiceWiki
Revision as of 08:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028655| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028655, complete gene.| tag = P0042B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028655

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028655, complete gene.

LocusTag

P0042B03.30

Ensembl Transcript ID

BGIOSGA028655-TA

Ensembl Protein ID

BGIOSGA028655-PA

Length

2461

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20939567..20942027

Sequence Coding Region

20939567..20939857,20940397..20941142,20941538..20942027

Genome Context

<gbrowseImage1> name=IndicaChromosome08:20939567..20942027 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:20939567..20942027 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAGGCGGCGAGGCGGACGCTGGTGCTGGTCAACCTGGCGGCCATCATGGAGCGCGTCGACGAGGCGCTCCTCCCGGCGGTGTACCGGGAGGTCGGGGAGGCGCTGCGCGCCACGCCCGCGGCGCTCGGCGCCCTCACGCTGTGCCGCTCCTCGGTGCAGGCCGCCTGCTACCCGCTCGCCGCCTACACCGCCGTCCGCTACGACCGCGCCCGCGTCGTCACGCTCGGGGCCTTCCTCTGGGCCGCCGCGACCTTCCTCGTCGCCGTCTCCGACAACTTCGCGCAGGTAGCTGTAGCAAGAGGAATGAATGGTATTGGGCTAGCACTTGTAACCCCTGCTATTCAATCTTTGGTGGCAGACTACTCCGATGACAATTCACGGGGATCAGCATTTGGATGGCTTCAACTTACTGGAAATTTGGGGTCTCTGATAGGAGGGTTGTTCTCCATCATGCTAGCATCTACTACATTCATGGGCATTGCTGGTTGGCGCATTGCCTTTCATGTTGTTGCTCTCATCAGTGTCACAGTTGGTATATTGGTTCGCCTATTCGCGGTGGATCCTTATTATATCAATTTTGGAAACAAAAAGCAGCATGTCCGCAAGTCTGCTTGGAGAGAAATGAAGGATTTGGTGGTGGAAGCTAAGGCTGTTGTGAAAATACCATCTTTTCAAATCATTGTAGCGCAGGGAATTACAGGTTCATTTCCATGGTCTGCCTTATCATTTGCTCCAATGTGGCTGGAGTTGATGGGTTTTACGCATAAGGGAACTGGAATTCTCATGGTCACATCTGCAGTAGCAAGCTCACTGGGAGGACTGTTTGGTGGAAAAATGGGGGATTATCTTGCTAAGCACTATCCAAATTTTGGTAGAATAGTCATATCTCAGATAAGCTCCGCTTCTGCAATTCCTCTTGCGGCTCTTTTACTGCTAGGCTTGCCTGAAGACCCATCTACAGGTTTTTTGCATGGTTCAGTCATGTTCATTGTGGGATTTTGCATCTCCTGGAATGCTCCTGCTACAAACAACCCTATATTTGCAGAGATTGTTCCTGAGAGATCAAGGACTAGTATTTATGCACTCGATCGTTCCCTTGAATCTTTATTTGCTTCATTCGCTCCACCAGTTGTCGGGTATCTAGCAGAGCATGCATACGGCTACAACCCAATCACTTTTGGAGTTGGCATAAGCAGTGTTGAGAGGGACAAGGAAAATGCCGCTGCCCTAGCCAAGGCTCTTTACACGGCAATAGCCATCCCGATGCTACTCTGTTGCTTCATCTACTCCCTGTTGTACCAAACATATCCTCGAGACAGGGAGAGGGCAAGAATGGATTCGCTGATAACTTCAGAGCTGCAGCGGATTGAACCGGACAGATCTCATCGGACCAGTGATTATTACAATGGGGAAGGTGTGTCGGTGATCAATATTGAGTATGGGGAGGAAGGGGTGGATGCTGACGATGATGAGAAACCATTAATGCAGTTCCGAATTGAACAAAGCGCGGCTGACAAATGA</cdnaseq>

Protein Sequence

<aaseq>MEEAARRTLVLVNLAAIMERVDEALLPAVYREVGEALRATPAALGALTLCRSSVQAACYPLAAYTAVRYDRARVVTLGAFLWAAATFLVAVSDNFAQVAVARGMNGIGLALVTPAIQSLVADYSDDNSRGSAFGWLQLTGNLGSLIGGLFSIMLASTTFMGIAGWRIAFHVVALISVTVGILVRLFAVDPYYINFGNKKQHVRKSAWREMKDLVVEAKAVVKIPSFQIIVAQGITGSFPWSALSFAPMWLELMGFTHKGTGILMVTSAVASSLGGLFGGKMGDYLAKHYPNFGRIVISQISSASAIPLAALLLLGLPEDPSTGFLHGSVMFIVGFCISWNAPATNNPIFAEIVPERSRTSIYALDRSLESLFASFAPPVVGYLAEHAYGYNPITFGVGISSVERDKENAAALAKALYTAIAIPMLLCCFIYSLLYQTYPRDRERARMDSLITSELQRIEPDRSHRTSDYYNGEGVSVINIEYGEEGVDADDDEKPLMQFRIEQSAADK</aaseq>

Gene Sequence

<dnaseqindica>1..291#831..1576#1972..2461#ATGGAGGAGGCGGCGAGGCGGACGCTGGTGCTGGTCAACCTGGCGGCCATCATGGAGCGCGTCGACGAGGCGCTCCTCCCGGCGGTGTACCGGGAGGTCGGGGAGGCGCTGCGCGCCACGCCCGCGGCGCTCGGCGCCCTCACGCTGTGCCGCTCCTCGGTGCAGGCCGCCTGCTACCCGCTCGCCGCCTACACCGCCGTCCGCTACGACCGCGCCCGCGTCGTCACGCTCGGGGCCTTCCTCTGGGCCGCCGCGACCTTCCTCGTCGCCGTCTCCGACAACTTCGCGCAGGTCTGATTCCAATTCCCCTCGGAATATCTCGATTCCTGCTTTTTAGTTGTTACCAAATATTCCAGTCTGTTTCACTTTACCTTGCCAAAGATCTAGGCCCGTTCATAGCAAAATTTGTCCAATTCTGCTGTTCAGAACTCCAGATCGCATTTCGGATCGAAGGATGGACGCATTTTGTACCTCTAGGATTCAGTAGTCTCAGCTGGCCATTTTTGTTGATTATTCAACATGTGAGTATTTGACCGTGCTATTCTAAGCTTGTGTGCTATAAATACATTCATGTATTGGGCACACCGATCTGAGCTGACGAATCATACGATGCAGACCTCTATTTGAATCCAGCTTTAATTTTCAGGCATGAATTTCCTGTCTGTTTATTTTTCTTGTTATGTTACTAGGTGAGATCTGATATTAGAATAGGCTGGTGTAACCAATAATGTTGGCAAGTTACAGCAGTTAAATAGAGAAAACTATTCTGCCTATAGAATTAAGAGTTGGCATGACCTTATCTTACTTGAAATGACAATTATTTTGTGTAGGTAGCTGTAGCAAGAGGAATGAATGGTATTGGGCTAGCACTTGTAACCCCTGCTATTCAATCTTTGGTGGCAGACTACTCCGATGACAATTCACGGGGATCAGCATTTGGATGGCTTCAACTTACTGGAAATTTGGGGTCTCTGATAGGAGGGTTGTTCTCCATCATGCTAGCATCTACTACATTCATGGGCATTGCTGGTTGGCGCATTGCCTTTCATGTTGTTGCTCTCATCAGTGTCACAGTTGGTATATTGGTTCGCCTATTCGCGGTGGATCCTTATTATATCAATTTTGGAAACAAAAAGCAGCATGTCCGCAAGTCTGCTTGGAGAGAAATGAAGGATTTGGTGGTGGAAGCTAAGGCTGTTGTGAAAATACCATCTTTTCAAATCATTGTAGCGCAGGGAATTACAGGTTCATTTCCATGGTCTGCCTTATCATTTGCTCCAATGTGGCTGGAGTTGATGGGTTTTACGCATAAGGGAACTGGAATTCTCATGGTCACATCTGCAGTAGCAAGCTCACTGGGAGGACTGTTTGGTGGAAAAATGGGGGATTATCTTGCTAAGCACTATCCAAATTTTGGTAGAATAGTCATATCTCAGATAAGCTCCGCTTCTGCAATTCCTCTTGCGGCTCTTTTACTGCTAGGCTTGCCTGAAGACCCATCTACAGGTTTTTTGCATGGTTCAGTCATGTTCATTGTGGGATTTTGCATCTCCTGGAATGCTCCTGCTACAAACAAGTAAGCAACATGTACCAGTTCGTTGCTTTCTTTGATATTGAAAGAATTTGTCAAAGAAACTAAAATTTTAGTACTCTAAAGTCATGTTTTGTGCAAAACCGTAATCCATTTTGGAATTTTGGAAAAATAGTAGTTCTTTCCGAAGGTAAAATATAATCTTGAGATGGAAAACTAAAGATATGTTACAAAATTTATGTGTTCTGGATGATGTACCAGCCTTTTCATAATTTCTTGATTAGAGAAAAAAGGCATAGCATAAGTTTTTTGAAAAGGAGGAATCATATTATATATCATGTCATGAGAATAATAGCAGTAAACTTCCAAATTCCTACTGATTTGACTATATGTGTTTGTGATTATTCCTACTGATTTGACTAATTTGTTTTTGCCTGTAGCCCTATATTTGCAGAGATTGTTCCTGAGAGATCAAGGACTAGTATTTATGCACTCGATCGTTCCCTTGAATCTTTATTTGCTTCATTCGCTCCACCAGTTGTCGGGTATCTAGCAGAGCATGCATACGGCTACAACCCAATCACTTTTGGAGTTGGCATAAGCAGTGTTGAGAGGGACAAGGAAAATGCCGCTGCCCTAGCCAAGGCTCTTTACACGGCAATAGCCATCCCGATGCTACTCTGTTGCTTCATCTACTCCCTGTTGTACCAAACATATCCTCGAGACAGGGAGAGGGCAAGAATGGATTCGCTGATAACTTCAGAGCTGCAGCGGATTGAACCGGACAGATCTCATCGGACCAGTGATTATTACAATGGGGAAGGTGTGTCGGTGATCAATATTGAGTATGGGGAGGAAGGGGTGGATGCTGACGATGATGAGAAACCATTAATGCAGTTCCGAATTGAACAAAGCGCGGCTGACAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028655