Os11g0162900

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0162900| Description = Conserved hypothetical protein| Version = NM_001072361.1 GI:115484334 GeneID:4349862| Length = 2512 bp| Definition ...")
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Gene Name

Os11g0162900

Description

Conserved hypothetical protein

Version

NM_001072361.1 GI:115484334 GeneID:4349862

Length

2512 bp

Definition

Oryza sativa Japonica Group Os11g0162900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3046737..3049248

Sequence Coding Region

3047076..3047097,3048096..3049087

Expression

GEO Profiles:Os11g0162900

Genome Context

<gbrowseImage1> name=NC_008404:3046737..3049248 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3046737..3049248 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaatccccaatcagatcagcggcggcggcggcggcggatcggttgttatagaaatcccggccgccacggagatcgccggagtggataccgcgccggcaaaggtatgtgacgatgatccccgtgctcaacccctccgcgaccgcgagtgggtgtcgcagctgcccccggaccaccccctacgctacacctgcggccttccgaacggggtcttcctctccatgtccttcgtcaccatcatctacgccgtgattgctccatggatgctgtggcgcgttgctaccgatcatgtgtccctcatgtggacatcgtcgatcctcgcgtgttcctacggcgcactgtggactatagccttgtccgaacggctagcaggtgccttcttggctatcatcttccgcgtctcctatgttgccttggtggccttcgcgtccacgcacctgattggtaccgccaatgggatctcgatcgtgtatctcgacacgttctacgttgctgggatgctcgggtacgccgtcgcggagtatcgtctccgtcgtggtaccgagcaatgccctagcgccatcttagccgccaaacctcctccattggaggaccaagagcgaggcgacgaggaggccgggctctactacatgggcttcttgtttggttcggtatccctctgtttggtggggaggatggcgtggctgcttctctacccctgcggcggcaagtgtctcatctcttacgtcatcgaggagctctcgtttgaggcatcaatgctgatctacatatgggttatctttgtttcccttactcagttggaaggggctctggtctgttacaacactctgttctgcaagatgccaatttgttttggtgcatggttcgttcttggcgtgcttcttggcgtacctgtgagtggtgctattgagatgctaatcttttggattggcactatggctctggctggattctttggatactgtctcgcggttcacgcatattgcaaaaggaatcagaagacaccagcttag</cdnaseq>

Protein Sequence

<aaseq>MEIPNQISGGGGGGSVVIEIPAATEIAGVDTAPAKVCDDDPRAQ PLRDREWVSQLPPDHPLRYTCGLPNGVFLSMSFVTIIYAVIAPWMLWRVATDHVSLMW TSSILACSYGALWTIALSERLAGAFLAIIFRVSYVALVAFASTHLIGTANGISIVYLD TFYVAGMLGYAVAEYRLRRGTEQCPSAILAAKPPPLEDQERGDEEAGLYYMGFLFGSV SLCLVGRMAWLLLYPCGGKCLISYVIEELSFEASMLIYIWVIFVSLTQLEGALVCYNT LFCKMPICFGAWFVLGVLLGVPVSGAIEMLIFWIGTMALAGFFGYCLAVHAYCKRNQK TPA</aaseq>

Gene Sequence

<dnaseqindica>2152..2173#162..1153#atcgacaaatcgacacagccaaagccgtcgtcgtcctgcttcctcctcccccgcagtagtcgccgtcgccgccgcgcaatccccaatcccttggtgttcttccccgcctctcgccacccaaaaccctaacccccctctctcactccacccgtgctgtgcacatggaaatccccaatcagatcagcggcggcggcggcggcggatcggttgttatagaaatcccggccgccacggagatcgccggagtggataccgcgccggcaaaggtatgtgacgatgatccccgtgctcaacccctccgcgaccgcgagtgggtgtcgcagctgcccccggaccaccccctacgctacacctgcggccttccgaacggggtcttcctctccatgtccttcgtcaccatcatctacgccgtgattgctccatggatgctgtggcgcgttgctaccgatcatgtgtccctcatgtggacatcgtcgatcctcgcgtgttcctacggcgcactgtggactatagccttgtccgaacggctagcaggtgccttcttggctatcatcttccgcgtctcctatgttgccttggtggccttcgcgtccacgcacctgattggtaccgccaatgggatctcgatcgtgtatctcgacacgttctacgttgctgggatgctcgggtacgccgtcgcggagtatcgtctccgtcgtggtaccgagcaatgccctagcgccatcttagccgccaaacctcctccattggaggaccaagagcgaggcgacgaggaggccgggctctactacatgggcttcttgtttggttcggtatccctctgtttggtggggaggatggcgtggctgcttctctacccctgcggcggcaagtgtctcatctcttacgtcatcgaggagctctcgtttgaggcatcaatgctgatctacatatgggttatctttgtttcccttactcagttggaaggggctctggtctgttacaacactctgttctgcaagatgccaatttgttttggtgcatggttcgttcttggcgtgcttcttggcgtacctgtgagtggtgctattgagatgctaatcttttggattggcactatggctctggctggattctttggatactgtctcgcggttcacgcatattgcaaaaggtaccatctctgttcctggcaagattattttacttttacgtttaattagctgatcagatttatgcagtcaaatataaaactagttgtgaatcatgttcttttttttctatggacaattacatgcaaactatgttttcaacgcttttcaatgtgagctgatgagatttagacaatttgaatatgctgcatgtaccattgcatgtctaacactagacttgttcttggtgggattgtgaggagccaaaatgatatcaatgtttatatcctagactgttctttatactctctccatctacttttgatagccatatttcatcttgatacacagaccaaggataagtaattctacttatcatcaatttaaacatgctactagccattcctcgtaaacaagcgattcattaatatttacatttcttaatgtccatgtagccaatcatgtgtggaagaatgaatagtcacgcattaaattcgagaaaatcattaagatgatagattgttggattgaaatatacctatcaaaaataaaattttcagatttggaaatatgactatcaaaagtagatggagggagtaattcagaacactagacccattcttaatgttgaactgaatatcagtttttgagcaaattgttctgttttttttacgaaacttttaataattagactattgcaaaactgtgcatgattatttatgacattgttggtgtctcttgtggtttttttctgaattttgaacatcatgattcacgaatgccccttttttaataagctgtaagtttgaaaacatatatatgttttagttttcttggatatgttgctatagtaatcttctatgctgaacttaattgttagcgatcatgttgtttctgttcacctaggtaggttgatactattctaaagattttaccatgcatatattatgtgttcaacatttcagtgaatcttgcgtatattgcttaagacattgaaattttgttgtcgacgattgaataggaatcagaagacaccagcttagagatttgcgggagctttgatgaccgttttgagaagccaggctttactctttgttgctcttagagaccaaagagcgattttaaagtatgatcaagatctcattctctaggtgtttggttgagtgctcttagaggcagagtaacgccaatgcctattgtgtgtagtattaacttacattgtatggtaaagtttattgtaaatgttgctgattgtgcataattggaaggtggtgactggatgaagaaatacactgtgttaggttcaggacgaaaaaggttaaggatatgcagaagtagcatatctgatgcaggcgtatatatatattgcaatatccgtcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0162900, RefSeq:Os11g0162900