Os11g0163500

From RiceWiki
Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0163500| Description = Homeodomain-like containing protein| Version = NM_001072363.1 GI:115484338 GeneID:4349866| Length = 4502 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0163500

Description

Homeodomain-like containing protein

Version

NM_001072363.1 GI:115484338 GeneID:4349866

Length

4502 bp

Definition

Oryza sativa Japonica Group Os11g0163500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3075031..3079532

Sequence Coding Region

3075847..3075899,3076710..3078108

Expression

GEO Profiles:Os11g0163500

Genome Context

<gbrowseImage1> name=NC_008404:3075031..3079532 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3075031..3079532 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctatcctcctttggctatcccatgtactgctgaaacttcattacttgaggttatattcatgtgcatcctcgtgcactcctgtgtccatcttatatggtaccaacaagaagttgaagtgtttgggtgatcgctttggggaaatggaaggcagcaacccacctggtaatatgacacagggaccttcctatgggagtttagatttgcatggtatctccaagcaaatgcatcctccaaactcaggaaatcagggcttcaaccagcctcagataccagggaattttaccattcctatggatagggttacagagcctgataacatctctgatggagttcagttaggacaacatgggaagattgcccatcatcaccatcaccacagacaccactcaaagaaccatgggagtgatgaagaggagcacgatatgaatgaggatgctgctgatggcaaagacaagaagggctctccatggcatcggatgaagtggacagattcaatggtgaagcttttgattactgcagtatcctacacaggggaggatcctggagctgatttaggcggtgggaggaggaactattcaatgatgcaaaagaagggaaaatggaaagcaatatcaaaggtcatgggcgagagaggttgccatgtgtcgccacagcagtgtgaggataagttcaatgaccttaataagagatacaaaagactaacagatatccttggaaggggtactgcttgtaatgttgtggagaatcactcacttcttgatcacatggatatttctgagaagatgaaagaggatgcaaggaagatactgaactccaaacacttgttctatgaagagatgtgttcctaccataataataaccgtataagtctgcctgaagatcccgcacttcagcagtcactacagcttgctcttagatgtaaagaggataatgatttcatgaggcatgcaagtggagatgctgaactagatgatgatcagagtgaagattcagattatgaggagaatgaggaagaacatcgagcagttgataccaatataaggggcccctcaatgcataaaaggatgtggcatgttgtagatcatggtgatgtaggttttgtcacctcatgctcgaatgatggtagtgggaggtctgatccctatgacgtgttggatatcaacaaaccctttccagatggatgtgatttggctttggtgcaaaaagacttggctctgaaagcagcagagattcaaaaacatcgtttgcagattgaaaccaaggctgtgcaactcgcaaagcaacgtctcaagtgggagatgttcaggaagaacaaggacttggaattggaaaagttggcgttggagaatgaacaaatgatgcttcagaataagcggtttgagcttgacctaagacacaaggagctagaacttgagattaagataaagggcaatgctaatcatccatga</cdnaseq>

Protein Sequence

<aaseq>MSILLWLSHVLLKLHYLRLYSCASSCTPVSILYGTNKKLKCLGD RFGEMEGSNPPGNMTQGPSYGSLDLHGISKQMHPPNSGNQGFNQPQIPGNFTIPMDRV TEPDNISDGVQLGQHGKIAHHHHHHRHHSKNHGSDEEEHDMNEDAADGKDKKGSPWHR MKWTDSMVKLLITAVSYTGEDPGADLGGGRRNYSMMQKKGKWKAISKVMGERGCHVSP QQCEDKFNDLNKRYKRLTDILGRGTACNVVENHSLLDHMDISEKMKEDARKILNSKHL FYEEMCSYHNNNRISLPEDPALQQSLQLALRCKEDNDFMRHASGDAELDDDQSEDSDY EENEEEHRAVDTNIRGPSMHKRMWHVVDHGDVGFVTSCSNDGSGRSDPYDVLDINKPF PDGCDLALVQKDLALKAAEIQKHRLQIETKAVQLAKQRLKWEMFRKNKDLELEKLALE NEQMMLQNKRFELDLRHKELELEIKIKGNANHP</aaseq>

Gene Sequence

<dnaseqindica>817..869#1680..3078#gtaggctcgtcgcggccacgtacgccatcccgagctcgggggctaccccggtcggaggcggagcgcttgggggccggggtttaatcgtgcggaggactcggtagggctcgccatacctcgcgccgtccggcggcgcagagcgcggcgtcgccgctggggagaaggacggactcaacgagacgagcgagcgacggccgacaggcgaaggcgttctcgcttcttggcctctcgccgttgaattggagacccacattgggcttgttttgtgtgttactagcatcaccaagagttcccctactactcccaatttcaaattttggggtttttcgagcaaaaaaaatggatccaacagatatccaaaccagcttccaaaaattttgagaccctaatcccgtgtttccgttctccaccagtagagaatacctcccgctcccaatccactgcagccgggcagttttcgcgcgctgccgaggtgcttggttcccccatctccattgattccccatctcgtgcgattggcggagctgatgagtgacgacagccacgggcgagcgggaggtggcacgtcgacaggcggcggagggccgccagcgcagctgcggcagccggcaagggcggctgggtgggctgcaggctgtggctgcagttgggcagcgcggcagtagcaggtggcgggccaacaagtagcagggcaggccggcagcagcagcagatcaacaggatgattcaatctttgctatttgccttatccaccttaaagatagcctattaatcgatccatctttgctaggagtatctgttttgcagattatttatatgtctatcctcctttggctatcccatgtactgctgaaacttcattacttgaggtaatttttagtgtcatgaggggttgttgtcatgcttaatatagacttgttaagataatattgtgtggtacaatgtggtgcaatttgagaatttttttcccattattcttgggttgattctcatgataattcatgagccacacctcttctttttttagtcctctgccactgatcgtgcgtgtgagaatttgatagtttatattttggtgtggttcgtggattattattacacatggacagctaatttgcgcacgacactttgtttttactattttttcttgtgaggtgacaaattgatttatttttccccatgcattttcttctcgttagttatgagtagcatggaaaggttgcaacatttttttgttttggctagtggttgattggttgccacttgccactgcaataatgttttaaaattgttccactcacattacccagtggagtaatatggtttgatttgtcatttgtgctgctgattaattaggttgttggttgatgcagtttagattcttcagaacactctgatttttagtgctccaatattatcttgctttggcaattatgacaactataggaggctgaaattaccctttattgtgtaacactgatttaaaatctcttcaaatttgtgcattagttatttcttattaggtggccctgattacatatggactctagttaagatatattgtgtgattctgaagatctttttcttttagcaaattgattctgaagattgagatgtatagaaatgtgcaatatacatgtgttggatttccaaaaattcataccaaactgccatttcaggttatattcatgtgcatcctcgtgcactcctgtgtccatcttatatggtaccaacaagaagttgaagtgtttgggtgatcgctttggggaaatggaaggcagcaacccacctggtaatatgacacagggaccttcctatgggagtttagatttgcatggtatctccaagcaaatgcatcctccaaactcaggaaatcagggcttcaaccagcctcagataccagggaattttaccattcctatggatagggttacagagcctgataacatctctgatggagttcagttaggacaacatgggaagattgcccatcatcaccatcaccacagacaccactcaaagaaccatgggagtgatgaagaggagcacgatatgaatgaggatgctgctgatggcaaagacaagaagggctctccatggcatcggatgaagtggacagattcaatggtgaagcttttgattactgcagtatcctacacaggggaggatcctggagctgatttaggcggtgggaggaggaactattcaatgatgcaaaagaagggaaaatggaaagcaatatcaaaggtcatgggcgagagaggttgccatgtgtcgccacagcagtgtgaggataagttcaatgaccttaataagagatacaaaagactaacagatatccttggaaggggtactgcttgtaatgttgtggagaatcactcacttcttgatcacatggatatttctgagaagatgaaagaggatgcaaggaagatactgaactccaaacacttgttctatgaagagatgtgttcctaccataataataaccgtataagtctgcctgaagatcccgcacttcagcagtcactacagcttgctcttagatgtaaagaggataatgatttcatgaggcatgcaagtggagatgctgaactagatgatgatcagagtgaagattcagattatgaggagaatgaggaagaacatcgagcagttgataccaatataaggggcccctcaatgcataaaaggatgtggcatgttgtagatcatggtgatgtaggttttgtcacctcatgctcgaatgatggtagtgggaggtctgatccctatgacgtgttggatatcaacaaaccctttccagatggatgtgatttggctttggtgcaaaaagacttggctctgaaagcagcagagattcaaaaacatcgtttgcagattgaaaccaaggctgtgcaactcgcaaagcaacgtctcaagtgggagatgttcaggaagaacaaggacttggaattggaaaagttggcgttggagaatgaacaaatgatgcttcagaataagcggtttgagcttgacctaagacacaaggagctagaacttgagattaagataaagggcaatgctaatcatccatgatctttgttctgttagcacttcatttcgcaatatggtaagcaaatggactagattttcagttacttttactaaaaaatgctcaatgtttataatttgggtagcttcttgtgggagttttttcatgacaagtttttaggtagtactgtgctactagtgtatatggaactatggaaatcatgcattggggctgtttcctattgatagtgtttacttcagctttatagtcccaaacccctgtagtacaaaaattagtcccatccatagatagaggcggcatcagtttttgacggagattttactgttctacagcaaagaaggcatcagttagatatgtactatcaactgggagttatttcgtgactagtattaagatcaactgcaatgactgtggttctatacatggtgtacttgggtgtaaacataatcagcgaataaaagataacaaaagggaagcaactgcatcaccaagatacaaatagtgatgctgctcggatttggtgatcttgtgtgctgtcagattggcacttccaagctgagtttcaatatccaataatcttcatgattcaaagtcaacaatatccaaatttttctttttcccctgattaaacagatattagttcttactcttgtatggataagttgttaatgggtaattggtatggtgtttgttatcttgacaagaagtagcttatatttgttcaattgcacgaacaatgtttacagtttgtctgtatgtagaacactgcttttaaatatgatggtatgctttattacagagagtttactctaaaactcgtaagtatataactgatgagtctagcttagctggttcacctatgcttagccaactccatcgtttgctctttagcttatcaaccacagccaaaatttgaattttaaatcttaaatttatggctaattttagcgaaaatatgtgacttaactctgaacgtttgcctctaaaacagattacattgttatagttttttctaaaatggattgcagatggttatcagggtagcatcctgttattttctgcattgagttttgtttcttccatgctcttccaataattccaagttctctctagaactgaataatggttgtctgaaactcaattcgttccccggattgttaatttcaggttgcagatcaattcaattcaggaccgtgtttatgcaagatggtagaggtggcagattgtttatgcaagatggtagaggtggcagattatctgtgactactgacaagtgacaacaatttcaatgctttatagctagctcagtgatcctctcctcttgttgtttatatatcattatatctcctgattctctctacttgtaaaatttccatgtgatactgggctccatctgtattctaaagttttcatcatttttttctatccaactttgttttactcaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0163500, RefSeq:Os11g0163500