BGIOSGA028693

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Revision as of 08:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028693| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028693, complete gene.| tag = OsI_292...")
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Gene Name

BGIOSGA028693

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028693, complete gene.

LocusTag

OsI_29283

Ensembl Transcript ID

BGIOSGA028693-TA

Ensembl Protein ID

BGIOSGA028693-PA

Length

8135

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21596556..21604690

Sequence Coding Region

21596556..21596609,21600098..21600215,21600848..21601029,21601118..21601225,21601330..21601394
,21601775..21601880,21602215..21602298,21602765..21602911,21603170..21603298
,21603610..21603677,21604156..21604189,21604278..21604362,21604527..21604690

Genome Context

<gbrowseImage1> name=IndicaChromosome08:21596556..21604690 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:21596556..21604690 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGGGGAGGCCGGGGCCGGGCCCGGGCCGGCGCCCTCCAGGAGCCAGATGATAATGGATAAGATCTCCAGCGGCGAAGAAGTTGGCGGCGCTGGGGGTGCGTACTCATACAACACATTGAAAAGACTGGATCAAATATGGTCTAGCATATGTGAAGTGCAATCAGATTCCAAAGTCCCAGAAGTTGTTACTCGAGTCCAAGGGCCATTGGTTGATTATGATCTTGGTGATGGCTCAGAGATCTTTGATGTATTAGTGTGTGGTGGCACATTAGGTATATTTGTAGCTACTGCCCTCAGTTATAAAGGCCTTCGGGTTGGAATTATTGAAAGAAACATAATCAAAGGGAGAGAACAAGAGTGGAACATTTCAAGAAAAGAGCTTATGGAACTCGTAGAAGTTGGCATCCTTTCCGAAGAGGAGATTGAACAGATAATATCAAGTGATTTCAATCCTAGTAGATGTGCATTTGAGAGTAAAGGTGAAATTTGGGTGGAGAACATCCTTAATCTTGGAATTTCGCCTGCTAAACTTGTTGAGATCATGAAAGAACGCTTCGTTTCTTCAGGAGGAGCCATATTTGAGGGGAAAAGTTTGTCAAGCATTTCTGTTCATGATGACTTTGCTGTATTAAACTTGAGTGATGGTGGTTCTCTGCCTTGTCGACTTGTTATAGATGCTATGGGTAATTTTTCCCCAATTGTGCGACAGATCCGGTCAGGCAGAAAACCAGATGGAGTATGCCTTGTCGTTGGTACTTGTGCTCGTGGATTTGACAGAAATACAACAAGTGACATTATTTTCAGTAGCTCATCCATAAGGAGAGCTGGAAATTCAGGAGTACAACTGTTTTGGGAGGGTTTTCCTGCTGGTTCTGGTCCCACTGATCGCACTACATACATGTTCACCTATGTTGATCCACATTTTGGGGGCCCAAAGCTAGAAGAACTTTTGGAGACGTTCTGGGATCTTATGCCTGCTTACGAGGATGTGGTTCTTGAAAACCTGGATATAATGAGAGTCATATTTGGAATTTTCCCAACCTATCGGAATAGCCCCTTGCCAGCTGCATTTGACCGTGTCTTGCAGGTTGGTGATGCTAGTGGAATCCAGTCACCTGTTTCTTTTGGAGGTTTTGGAAGCTTGACAAGGCATCTTGGTCGTTTGTCAAATGCCTTTAGAATTTGTCTAAAATATAACTTCTTCACCAACATTCTCTTCTCAACCAATCACAAGCCTCCACCATTCAATTTCTCTACCTACCTCCACTTCTCAACCAATCACAACCTTTCACCATTTAACTTTTTCTACTTTCTTAATAACCGTGTTGAACTCTAA</cdnaseq>

Protein Sequence

<aaseq>MAAGEAGAGPGPAPSRSQMIMDKISSGEEVGGAGGAYSYNTLKRLDQIWSSICEVQSDSKVPEVVTRVQGPLVDYDLGDGSEIFDVLVCGGTLGIFVATALSYKGLRVGIIERNIIKGREQEWNISRKELMELVEVGILSEEEIEQIISSDFNPSRCAFESKGEIWVENILNLGISPAKLVEIMKERFVSSGGAIFEGKSLSSISVHDDFAVLNLSDGGSLPCRLVIDAMGNFSPIVRQIRSGRKPDGVCLVVGTCARGFDRNTTSDIIFSSSSIRRAGNSGVQLFWEGFPAGSGPTDRTTYMFTYVDPHFGGPKLEELLETFWDLMPAYEDVVLENLDIMRVIFGIFPTYRNSPLPAAFDRVLQVGDASGIQSPVSFGGFGSLTRHLGRLSNAFRICLKYNFFTNILFSTNHKPPPFNFSTYLHFSTNHNLSPFNFFYFLNNRVEL</aaseq>

Gene Sequence

<dnaseqindica>1..54#3543..3660#4293..4474#4563..4670#4775..4839#5220..5325#5660..5743#6210..6356#6615..6743#7055..7122#7601..7634#7723..7807#7972..8135#ATGGCGGCGGGGGAGGCCGGGGCCGGGCCCGGGCCGGCGCCCTCCAGGAGCCAGGTGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGATCGGAGCGTGTGCTTTCGGTGGCGACACGATGCGGTTATACCCTTGTGAGGACCGAGAAGTTACACGCTATGGTTTGAACTCTATTGCGTTTGTTAAAACGATATAGATGAAGAGAGGATTATACCTCTATCACCCGTCTTTCCGGGGCTAGGGGCTTTGCTGTTTATAAGCATTTCAATGGTGCATTTCCATTGTGGCATTGTGAAAGAGAGAAAAAAAAAGTTGCCAATGCCTGTTTAGAGTCAATTTTTTTCTCATGCAATATTGTGGATGATGATTCAAGGTTATTCAGCCTAACGCAACTGACACTCTGTTTTTGTCACCTATAGGGCGTTTCAAAGTAATCAGTATCTTCAAATACAACATCTGCACGTTCTGCTTTTTATTTGTCCATTCATGTCGTTTTTTTGTTTTTTTTTACTGAAAAATTTTCATGTCTGTGAGGGGATTTTAAAGTTATTTTTTTAGGTAATGGAATAGAAATCAATCTCGGCCTTTTGCTCAAACGAGGTACATCCAATTATTATACCAAATCACTCAAAACGAGTGCAACTCAGAGAACTTAAAAGAACTCTTCCAAACATAAAGCGAACACAAACTCATAAACGCCAACACAATTATTGAATTCTATTTGTGAATCTTTATCCGAAGTTGACAAAAAGCTACATAATTGTCGTCTCAAGATTACGACTTGTAGACTTCAAAAGCTTGCAGTTTTCATCACACTTTTGTAGTTGTGCCTAGGACTAGAGCCAATACGTTGCCCTGAAAAGAACCCGCATATAGGACATAGATGGTGATTTGTTAAAAATAATATCATTCCTACTCAACCATAGAGCCCAACATATAAATATAGCAGAGGCTCCTATAAGAACAAGTTTACTGGTTTTTTTATCAACCCCCACAAGCCAATTTTCAACGATATGAGATATACTATGTGGAAGGTATAAACCAGATGAAAACTAAACAGTTCTTCAAAGAAATTTTGCAAAGTGACACTACATAAAAGATGTTGAATAGTCTCATTTTTCATGCAGAAACAACATCTCAAACTACCATTCCAATCTCCTAGCTAAGTTGCCCTTTGTCAACACTACCCCCTTAAACAGGTACCACATAAAAATCTTAATCTTAAGAGGCATCTTAAGTTTCCAGATAATCTTATTCTTCTCAATGTAACCATTGTTTATTAAAGCTAAGTACATTGAACGAATGGAGAATTGATCATTTTGATGAAAATTCCATCTAAAAAATCACTTTCTTCTGTCAAATGAATATGAACTATTGATGCACATAAATTATGCTAATAAGCTAGATTCTGACCTACTAAAGCTCTTCTAAAAGAAACATTCATTGGGATAGAATTCATAACATTTGCAATTGAAGAATTGTTCCTTCAAACTATAGCATATAAAGACGGGTACCTGGCTTTAAAGGAATAATTACCTATCCATCTATCCTCCGAAATTTGATTTGTTCACCGTTATTCACTATCCAGGAACCCATGTTTAAGAAAGTACTCTTAACTTTCATAAGACCCGACCAAAAATGGGAATCCCCTTGTTTCCTATCAATTTAACAAATTGATTGATTATTAAAATATTTCCTTTTCAATAAGTCCCGCCAAACACCTTGCTCATTTATAAATTTAAACAACCATTTACTCAAAAGACATTTATTCTGAACTTCCAAATTATGAATGCCAAGACCTCTTTGATCTTTGGGTTGGCATATTATGTCCCATCTTGTAAGTCTATACTTCCTTTTATGATTATCACCTTACCAAAAGAAACGTGATCTATAATAATCAATTTTTTGAAGAACCTCTTTTGAAATCTCAAAAAAAAAAAGATATCATAAACATAACTAAACATGAAAGCACAAAAATTAATCAATACCAATCTCCCTCCTACTACATATGCTTGCCTTTCCAACTACTAAGTTTCTTTTCAATTCTTTGCTCAATTATTTTCCAATCTTTGTTACTAAGTTTTCTAAAATGCATTGGAATGCCAAGATACCTAACAGGAAAAGTACCAAGCTTACATAAAAAAAAATTAGAATATTGTTATTGACAGTCCTGAGCCTGACCAAAACAAAATAATTCACTTTGTGAAAATTTATTTTTGGGCTAGATAACTTTTCAAAAACAGATAGTATCAATTTCAAATTCTTAGCCTTCTGTAAATCTTGCTCCAAAAAAATAATAGTGTCATCTGCATATTGCAAAATAGATAAACCATCATCCACCAAATGTGGAACTACCCCACTAATTTGACAACGTCTCTGGAACAACAGATAACTTCTCCACTGAACTGGCTCCACCATAGAAGTATCCTCGACTAAACCATCATATTCATCATCCGACACATTCAAACCATTAGACTTAGGCAACAACAAAATCTGAGTAGTAGGCAAAGAAGTAGCACTCCTCTGACTACACTGGCCAGCAACATTCACCTTATTACCTTTGTCAGAATTAATAAAATCTGATTCCTTACACAAACCATGCATCTTACTTCCTTCATCATTCTTTTTCCTCATCCCTATCACCATCATTTTCCATATCCATGGGTTCAGGCTCATCAGGCCCATTTTTAGGCTTCACTCTAAAAGATAGTTCGTACAAATAATCACCAATGCCCACATCAACCACATCAGGAATTAAAGATGGATCTAGCACTAAGGCTTGTAATCGAGCTATGTCATATCTTCTAGTAAAATGCATATCAACCATTTTAGTAATACCAGATAGAACCAACAACCCAGATGATTAAGTATTCCCTCAACTCAGAAGGTAACCCTTTACACTGAACCCAAACCTTTGGAATCACATATTTAACCTCATTACCAACCCCTCTTTCCACTATCTGCATTTTAATCTCACCAACTTTAGTGTGCAATATACCTCATTCCACTATGCGTTTTAGTTCAGCAGCAGAAGGAAAAATAGTGCGAAAAGTATTGTCACCGTTATCTTGAACCTCCCACTTCCATTTACCTGGAATTAACCTTTCCAACTCAGAGATAATAGAATTCACTGACATCTGTCCACCAATCACTTTGATCAAAGCCGCCTTAGGCTCATAGATCTTCTAGCTAGCTGAAAGAGGAATATGAAAAATACCCAAACCATCCACTGCATAACCACAAAGTTCAGTTGAAGGTTTATTATGTGATCGAAAGATCGGACAACGAGAACCAACATGGTCCTCACTTTCACAAACCTCACAGTAAAACTTCGAATAGCATTCCTGCAGTGTGTGCCACTTTGTATAGCATCTATAACAATAAGGATTCTTACTCAAGCCTTTACTGTCTACCTTTGATTTACCTTTGTTACTGTCAACCTAATGTTGCTAAATCATTTGTTTAGATGATAATGGATAAGATCTCCAGCGGCGAAGAAGTTGGCGGCGCTGGGGGTGCGTACTCATACAACACATTGAAAAGACTGGATCAAATATGGTCTAGCATATGTGAAGTGCAATCAGGTATGGTCCCTCAATCCTCACTCAACAATTATATAGATAAGGTAGTCTGCGATTGGAGAAGTGAGTTGTCCTGACCAAATATGTTATTGTTTTGTTGGATACTTAATTCAGTAATTTTGAATAATTGAATTCCGGTAGCTGGTTCCTTATTTGAAACAAGAAAAGTGCTTTTGGAAGTAGGAAATCCACAATTAGAGTATCCTATAATTTAGTTTATCCATTTCATTCTTTCATTTTCACCAAACAGCAACCATGCATGAGTGACAGTCCAATTTTAGCTCACATGTGGTCAGCTTTCTTTGCACATGGAAGTACTTTGCTTCACTAAGCAAACTATTGCAGGTTTTACTCAACATCCCTCTGTGCTATGCCTAGATAAAATTCTTTTCTGTGCAAGCAAGAGATTGAAATGTGCTTTATTTGGTGAGCTCCTAGATTGACATAGTTGACAACGCTGGCCTTTGAAGATTAGCTTCTGATAGTACACCTTTCCAGTTTAATAAGACTTGCCAACTGTGTTTCGTGGATGTATTGGGCAATAGCAACTTGGCTACTTGAGGACTGAGGACTGATTGTTTTATTACATTCTCGTAGTATTATAGCATTGTGATGGAAATGTATTGCATATGCAGATTCCAAAGTCCCAGAAGTTGTTACTCGAGTCCAAGGGCCATTGGTTGATTATGATCTTGGTGATGGCTCAGAGATCTTTGATGTATTAGTGTGTGGTGGCACATTAGGTATATTTGTAGCTACTGCCCTCAGTTATAAAGGCCTTCGGGTTGGAATTATTGAAAGAAACATAATCAAAGGGGTAATTCAGCCACATATGGCTATTCCTGAGTTATCCCAATAGCACTCTACTGAATAATATGAAATGTGTACATGTATCTGCTAAACAGAGAGAACAAGAGTGGAACATTTCAAGAAAAGAGCTTATGGAACTCGTAGAAGTTGGCATCCTTTCCGAAGAGGAGATTGAACAGATAATATCAAGTGATTTCAATCCTGTAAGGTCTTTCAGATAAAACTAGCCAGGAGGTATTCTGTTTTATTCTTCATTTTAAAATAGCTCTTGTTGGCTAACTAATTGCATGTTTTTCTTACTTTGCAGAGTAGATGTGCATTTGAGAGTAAAGGTGAAATTTGGGTGGAGAACATCCTTAATCTTGGAATTTCGTAAGTTGTCACTTGATGCCATATGTAGACCAGCTTTGGCTAGTTGGCACTTGAAATTGTGATGGTTGCAAGATTTAAAAAACATACATTACGCTTGATAACCAAATTAAATCATGTGCAGGGTAACAGGGCATGTATAGGATGAAAATCGACATTTACTTTGTGTAGTGCAAAAAACATGTTCCTTAGTGTTGGACACTGGTAGGGATTTAATTAGTCTATTTGTAGTTAGTCTTATATCCATCATCACCTACTTGATGAATTGTTGTAGTGTTCACTCATCTTTTCATAAGATCTATAGAAATGTATGCGATCTGAAGAGCATCGTTTCTATAACTATAACTGTTCTGTGATTCTATTATACATTTCTACCTGTCTAGGCCTGCTAAACTTGTTGAGATCATGAAAGAACGCTTCGTTTCTTCAGGAGGAGCCATATTTGAGGGGAAAAGTTTGTCAAGCATTTCTGTTCATGATGACTTTGCTGTAAGCAAATTATTCTGTCTTCTTGCTACGATAAAAAATGTTTTGAAGTATGTTGCTAATTTTTACAAGTACACAACGGAAACTACAAAGCTTTATTCTATTTCGCATGAAGTTGCCTATGATCAATTGACTGTATTATCTGCATCTGATTTTGAAAGGATGATCTTTATTTGACCAATAAAATAAGAATAATTCTGTTTTATAAAAGAACTCATCTAGGTTGTTACTAAAGTTCCTTTACTATGTACCATTATAAGTATTAATGTGCTAATTCATTACTTCCTAGTGCACTTTGCCAAGCAAATAAGTCTCAATTTTTACTTGTGTTCGTCAGGTATTAAACTTGAGTGATGGTGGTTCTCTGCCTTGTCGACTTGTTATAGATGCTATGGGTAATTTTTCCCCAATTGTGCGACAGGTATTCCTGACTTTTAATCAAAATGACTGCATCAAGATGAAAATTTCTTACATCAGTTACTGCTGTCTGACAAACAAGGCCCCTCAATTATTTCTGTGTCTCCAATCTATGTTCTAGCAAGTTCGTACCAAAAAGCTTCATTTCCATGTACGGCCCTTGTGTTTCATTTCATGTGTGCAATTGTAATCTGTAAGAGCATGTGCATAGTTGTAATCAGTAAGAGCTCTATGTCCAAACTACTTGTATGAACTGAAAACATCCATCTTATTTTGCCCAAACTATTCCATGCTTTAAGGATAATGGGGTACTGAATTGTAACTTCAATATTATAATACATATTACTTATTAGATCGTTGAACACCATGCTTATCTGTCACTTGGCATCCTTAGTGCACATAGTCACGTACAGTTGCTGACCCTTCCAGATTTCACATTTTAAAATACAACTCTTCTGTCCTTGTCTAAGATCCGGTCAGGCAGAAAACCAGATGGAGTATGCCTTGTCGTTGGTACTTGTGCTCGTGGATTTGACAGAAATACAACAAGTGACATTATTTTCAGTAGCTCATCCATAAGGAGAGCTGGAAATTCAGGAGTACAACTGTTTTGGGAGGTAATTGATTTTTTTCCCAGCATTTTGACACAAAGTTAATGCTTTGAGATGAACTGAAAAAAAATCAAAATTTTAAAAGCATTTATCTCAACATAATTTCATTAGAACAAAAATGCTTCTGGCACTGCTAACCTCATTTTTAAAATTTCTTTTAACTGCCATCCTCATTTGCAAAATCAGCTTTCCATCTATTGCATGAATAATTTCATTTTTCATGTTTTGATTTGTTTAATAGTCTATTCTCACTAATTATGTTAGGGTTTTCCTGCTGGTTCTGGTCCCACTGATCGCACTACATACATGTTCACCTATGTTGATCCACATTTTGGGGGCCCAAAGCTAGAAGAACTTTTGGAGACGTTCTGGGATCTTATGCCTGCTTACGAGGTAAACAAATGCAACCCTATGTGACAATTGTAAAAAATACAGTGTGTTATCGTGTAGACGTGTACAACTGTACATTTACACCATGGTCGATAAATTGTACAGAAAAGAGAGCTCAACTCGTGTTTATGGAAGTTCTTTTGTTTCAAGTTAGTGAACTACTTGGTTGTGTACTGTAAAATAACGTTGGTAATCTATGCACCATTGAATTAAGAGCTGAAAAATATATATTGGCATATTCTGAACTTTTGATATGTAGAGATACTTGGATAACTATGCTTTGTTCTTAATTCTTATTTTTGTGCTCATTGTAGGATGTGGTTCTTGAAAACCTGGATATAATGAGAGTCATATTTGGAATTTTCCCAACCTATCGGAATAGGTAACAGAAATTTATATTTATCATTCCCCTCATGGTTATTAGATGATAATAAAATACAAATGAACCCAACTATAGATGAATGATCTGCTGCAACTACCATTCGATGGCAGATTGTTGGCACAGAATATTTGTTCCTTCACTATTTGTTACCTGGGTTATTTATTTGCTGAAAATAATGACCCTTTGTGTTCTCTCTTAGTCACGCAAATTGCTCTACTGTAGATGCTCCTTACAGATGCCCATTTGAAACTTAAAAGAGTTAAGAGAAAGTTCATTTTGAGTCTAATCTTCACACATGGACATAAGAAAAGGTGGTAAACCGTCATATTTAGCAGTTTGTTGATGTTTTGTCTGCTTTACGCATATCTAGTGTTAGTACACTCTGCACGCTGTGTATTCATGTCTAGGTTATGGTCTCTTAGCAGTTTTTTTGTTTATAAGTTTGTATGCTAACTTTGGCTTATTTGATTCATTTCAGCCCCTTGCCAGCTGCATTTGACCGTGTCTTGCAGGTATGCCATTTCTCTGCTTCGGAAGCCTGCTGGATGTACCCATTTCTCCCCCTTAACTAGTAACACCCTTCACTGCTTTGCACTTCAGGTTGGTGATGCTAGTGGAATCCAGTCACCTGTTTCTTTTGGAGGTTTTGGAAGCTTGACAAGGCATCTTGGTCGTTTGTCAAATGGTACGACTGTACGATCAATAATTTTTCCTTAACAACAAGAGTGCATGATCATAAAATGGTAACATGCATGCTCTAATATGAACAAAACCGAGTCCACAGAACTACAGAAGTAAGAAAAATAAGTCATGCTACTCCCCCCCGTCTCAAAATATAATAACTTTTAGCCTTTAGAATTTGTCTAAAATATAACTTCTTCACCAACATTCTCTTCTCAACCAATCACAAGCCTCCACCATTCAATTTCTCTACCTACCTCCACTTCTCAACCAATCACAACCTTTCACCATTTAACTTTTTCTACTTTCTTAATAACCGTGTTGAACTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028693