BGIOSGA028723

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Revision as of 08:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028723| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028723, complete gene.| tag = OsI_293...")
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Gene Name

BGIOSGA028723

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028723, complete gene.

LocusTag

OsI_29346

Ensembl Transcript ID

BGIOSGA028723-TA

Ensembl Protein ID

BGIOSGA028723-PA

Length

7837

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22403039..22410875

Sequence Coding Region

22403039..22403431,22403547..22403645,22407955..22408125,22408336..22408383,22408528..22408780
,22408937..22409047,22409536..22409672,22409770..22409883,22409974..22410173
,22410260..22410508,22410719..22410875

Genome Context

<gbrowseImage1> name=IndicaChromosome08:22403039..22410875 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:22403039..22410875 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGTCCGGCGGCGGCGGGGTGGCGGAGGAGGTGGCGAGGCTGTGGGGGGAGCTGCCGGTGCGGGTGGACTGGGCGGCGGTGGCGGCGCAATGGGCGGCGGCGGCGGCGGCGGCGAGGGCGGCGGTGGTGGTGCCCGCCGTGCGGGCGCTGGTCGCCGTGTCGCTCGCCATGACGGTGATGATCCTCGCCGAGAAGCTGTTCGTCGCCGCCGTCTGCCTCGCCGTGCGCGCGTTCCGCCTCAGGCCCGACCGCCGCTACAAGTGGCTCCCCATCGGCGCCGCCGGCGCCGCCGCCTCCAGCGAGGACGACGAGGAGTCCGGCCTTGTCGCCGCCGCCGCCGCGTTCCCCATGGTGCTCGTCCAGATCCCCATGTTCAACGAGCGCGAGGTGTACAAGCTGTCGATCGGGGCGGCGTGCTCGCTGGACTGGCCGTCCGACCGCGTCGTCATACAGGTGCTCGACGACTCCACTGACCTCGTTGTAAAGGACGTCACCGATAAGGTCATCTTCCAAGACAAAACTCCGGCGAGGGATGTGCCGGGAAGGGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAAGCGGCGGTGATGCGAGGGAGGAGGTGGAGGGGGATATCTTCGTGGAGGAATGCGCCCTCTCGGCGCCTCGTGGATCGGAGGATATCTCCAGTAGAATTATCAGATCTACTAGTAGTTTGGTAATTAAAGATTTGGTGGAGAAGGAGTGCCAGAAATGGCAGGGCAAAGGCGTGAACATCAAGTACGAGGTCAGAGGGAACAGGAAGGGTTACAAAGCCGGCGCGCTCAAGGAAGGGTTGAAGCACGACTACGTGAAAGAGTGCGAGTACATTGCCATGTTCGATGCCGACTTCCAGCCCGAGTCTGATTTCCTCCTTAGGACCGTTCCATTCCTCGTGCACAACTCGGAGATCGCCCTTGTTCAGACTCGCTGGAAATTTGTTAACGCTAATGAGTGCCTGTTGACAAGGTTCCAAGAAATGTCGTTGGACTACCACTTTAAGTACGAACAAGAGGCTGGGTCTTCGGTGTACTCTTTTTTCGGCTTCAATGGGACTGCTGGTGTCTGGAGAATTGCAGCAATTGATGATGCTGGGGGCTGGAAGGACCGGACAACTGTGGAGGACATGGACCTTGCGGTTCGTGCAACATTGCAGGGATGGAAATTCGTATATGTTGGTGATGTCAAAGTCAAGAGCGAGCTACCAAGCACATTCAAGGCATACCGGTTTCAGCAGCACAGATGGTCATGTGGACCAGCAAATCTGTTCAAGAAAATGATGGTAGAGATTTTAGAAAACAAGAAAGTGTCATTTTGGAACAAAATCCACCTTTGGTACGATTTCTTCTTTGTTGGGAAGATTGCTGCTCACACAGTGACATTCATCTACTACTGCTTTGTGATCCCGGTGTCCGTTTGGTTGCCTGAAATCGAAATTCCTCTCTGGGGGGTTGTCTATGTTCCTACAGTCATCACCCTCTGCAAGGCTGTTGGAACACCCAGTTCATTTCATCTTGTGATCCTCTGGGTCCTATTCGAGAATGTCATGTCATTGCACCGGATAAAGGCGGCAGTAACTGGTATTTTGGAGGCTGGCCGAGTCAATGAGTGGGTTGTCACCGAGAAGTTGGGAGACGCCAACAAGACAAAGCCAGACACCAATGGATCAGATGCTGTGAAAGTGATTGATGTGGAGCTAACAACGCCTCTAATACCAAAGCTCAAGAAGAGACGAACGAGATTCTGGGACAAGTACCACTATTCAGAAATTTTTGTTGGCATCTGCATAATTCTGTCTGGTTTCTACGATGTGCTTTATGCAAAGAAGGGATACTACATATTCCTCTTCATTCAAGGCCTAGCTTTCCTCATTGTCGGTTTTGATTATATTGGCGTGTGCCCTCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MSSSGGGGVAEEVARLWGELPVRVDWAAVAAQWAAAAAAARAAVVVPAVRALVAVSLAMTVMILAEKLFVAAVCLAVRAFRLRPDRRYKWLPIGAAGAAASSEDDEESGLVAAAAAFPMVLVQIPMFNEREVYKLSIGAACSLDWPSDRVVIQVLDDSTDLVVKDVTDKVIFQDKTPARDVPGRGGGGGGGGGGSGGDAREEVEGDIFVEECALSAPRGSEDISSRIIRSTSSLVIKDLVEKECQKWQGKGVNIKYEVRGNRKGYKAGALKEGLKHDYVKECEYIAMFDADFQPESDFLLRTVPFLVHNSEIALVQTRWKFVNANECLLTRFQEMSLDYHFKYEQEAGSSVYSFFGFNGTAGVWRIAAIDDAGGWKDRTTVEDMDLAVRATLQGWKFVYVGDVKVKSELPSTFKAYRFQQHRWSCGPANLFKKMMVEILENKKVSFWNKIHLWYDFFFVGKIAAHTVTFIYYCFVIPVSVWLPEIEIPLWGVVYVPTVITLCKAVGTPSSFHLVILWVLFENVMSLHRIKAAVTGILEAGRVNEWVVTEKLGDANKTKPDTNGSDAVKVIDVELTTPLIPKLKKRRTRFWDKYHYSEIFVGICIILSGFYDVLYAKKGYYIFLFIQGLAFLIVGFDYIGVCPP</aaseq>

Gene Sequence

<dnaseqindica>1..393#509..607#4917..5087#5298..5345#5490..5742#5899..6009#6498..6634#6732..6845#6936..7135#7222..7470#7681..7837#ATGTCGTCGTCCGGCGGCGGCGGGGTGGCGGAGGAGGTGGCGAGGCTGTGGGGGGAGCTGCCGGTGCGGGTGGACTGGGCGGCGGTGGCGGCGCAATGGGCGGCGGCGGCGGCGGCGGCGAGGGCGGCGGTGGTGGTGCCCGCCGTGCGGGCGCTGGTCGCCGTGTCGCTCGCCATGACGGTGATGATCCTCGCCGAGAAGCTGTTCGTCGCCGCCGTCTGCCTCGCCGTGCGCGCGTTCCGCCTCAGGCCCGACCGCCGCTACAAGTGGCTCCCCATCGGCGCCGCCGGCGCCGCCGCCTCCAGCGAGGACGACGAGGAGTCCGGCCTTGTCGCCGCCGCCGCCGCGTTCCCCATGGTGCTCGTCCAGATCCCCATGTTCAACGAGCGCGAGGTGAGTCATCCACGACGAGGAATTGAGCATGATGATTAGTGATGGTGATTAGCAAGTAGAGGAGTAGTAATTAAGTTGGATTAATTAACCGTGGGTGATTAATGGGTGGATGAAGGTGTACAAGCTGTCGATCGGGGCGGCGTGCTCGCTGGACTGGCCGTCCGACCGCGTCGTCATACAGGTGCTCGACGACTCCACTGACCTCGTTGTAAAGGTAACCAAATTAATTCCATTATTATTCCCCTCTCTTTTTAATTAATTTCCGTCTCTTTTCAGCTGCAATTTTTTCCAAACCTGAAATTCGTTCATAAACAAATTAACTATATATATATATAGGCAATTCAACAAATGCATGTGAAGGCTACTTACTCTAGGCCTTTTTTTTTAGCTTCCATTTCTGTTCTTATTATAGTTTTTAACTTCTGTGGCCGCCGGCAACTCGTTGTCGCTGAGCTTGCTGTTTGCACGTTTTTACCCATTGTCGCTTCTCGTCTCCCCGTGTGCCACGCTGGCGCTCGCCGGCTTCTGACCTGGCCGTTTCATCCGTCCGCGACAACAACGACGGAGCGGTCAAAATGTTAAATTCACCGCGTCACCACCATCCCTGCCATGTAGGCGACACATCGGCACGGTGACTGACAGGTGGGTCACACGTTGCTCGTCGCGATGATGGCTACGAGGGGTGAGATGATGAGATGGCGGGGGTACGGTGGTATAGTGGCACGGCGTGCGGATGAGTCAGCAAAGTGTTTTCTGACAAGGTGGGGGCCAGTTTGTGTTGCCAGGGTGGCACAGGCCCACCCCGGGTGGTGGGGCCCATTACCAGTAAGCAGAGGAGTGCATTTGCATGTGCCGATTCATCAGAGGGGTTCAGAATATTGTCTCTGAGACCGATCCATCCGTAGATCGAACTGGACAAGAAAAAATAATTAGAGAGAGTGAATGAACACTGTAGCTTCACACGACAACGGGTAGTGATGAGCTAGTGTGTAGATATATAGAAATTCTGCGTACGTGATCGAGTCGCTGTCAGTCGTCGTCGTTAGCGTCCCTCCACAGAATGACACAAAATCAATCAAAATCGATCGATCGCCATCGATTCCCATTACCGTCCCCCTGCAGCTGATGCCTCCTACTTTTGTCGGCCGGCCGCCGTGAAGCACGCCGCGCCGCACGGTGGTCCTGCGGTCCACCCCTCTCGCCGGCGGTGGCGGCGGCGGAGGATCTGATGCTGGCCCGGCAAGCCCTGAGTAAACCGGCAATGCCAAGGTGTGCGTGCATCAAGCAACAGATTAATATGGGCTTCGATTATTTGATATCTTGACCCACTTTTATTTACTCGAATGGTTCTACATGTCATCCTCACAAGTATTAATTAAAGAAATTAGTCAACACAAAAAAAATATTAAATTATCAAATTTCTCTCATATAGTAGCATATACAGGTAATAAGTTGATACCCGTACTGGGCATTACTAGATAAAAATAATATTAGTATTTGAGTTCATATTTGGCTATAGTCTGAGTTCATAGTTATAGTTGGAAGTCCGTTTTTTTAAACGGATAAAAGTAGGTATGTATGCTACTGCATGCGGCTGTGGTTGCTGATACGCCGAACAACTTATGATGATGATACATCAGCCTCAGGTTGCTGCGTGCCAATCAGGATCCTGTTCTCGGTGCTCCGGACCCACATGTCAGTCACTCACTTAACGCAACTCTTTTTTAAAAAAACTTACATTTTATCAAGCGACAATGATAGAAGTAGGGCGAGCTTAAGTAAAAGCAGCTTTACACTTCATCAAAGAAGAGTGCTCATTGTCGTCGCTGGTGAGCTAAAAAGGCTTAGCAGGGACAAGAGTTTGTTAATTCCTGTCTCCACCAATGGCCTCATGAGGTCATGATCCACATGCGGCCATTGTTTAACCGCACAAAGATACACAAACTAGTAGCAAATTAACTAGCAATTGTATTAGTAGAATAGTAGTAGATCAGAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCGATCTATTGTCCTGGAGGAGGCTGGAGCCATGTGAGCAAACGTTTCAGTGTTCTTCTTCTTCTTCTTCTTTTTAACGCAAACTTTGGAGAGATTGACCCCCGTTATAAATTAACTGGCTTACCTGGTCAGCAGCCTTTTTGCCTGAAATACCGTACTGTAATTCAGTGGTGGCCCATTGGAGTCTTCTTTCCTAATCGCTTTGCTTAGTTGGTCCCCGTCTCGTTTAATAACATTTATACCTCTCTTTTGTGTACTCCTGCCTATTAGTACCTTTCGTCAACGCCACCTACTTCACCCACAGAGTACTCCCTCCGTCCAATTTCAAGCGCAGGCATGAGTTTCTGTGTCCAACTTTGATCGTATGTCTTATTTAAAATATTTTTATAATTATTACTTCTGTTGTTATTAGGTGATAAAACATTAATAGTACTTTATATATGAATTATGTTTTTTATCTTTTAAAAAGATTTTAAATAAAACGGACTATTAAAGTTGTATAGGGAAACTTATCATTCGTATTTAAAATAGAACGGACAGAGTAGTATTTACCTCTCATAATAATTAACTTCAGATCACCGCGTCAACCATGTGCACTTGCTAAGAGGACGAAATTACAGACAGGCAAGGTCGGAGGTACATGCCAGGTCTTCTTCCTTGCAGGGGCGTATTTAGCGTATTTAGGATTTTAATATATGGATGGTCCAACTTACATAACTTTTATAAATATCATAAATATAATAAGATAATACATAATAGAAGTATAAATTGGTTAAAATTGCATCGTAATGTAGTATTAATAAGATTTTTTTTCTCTTCCCAATAATTTTTTCACATAAATATATTTGTCTTGAGCTAGGTTTCTTTTTTGGTCGGGTCCATCCTTTGGATACGCCAGTGCTTCTATGGAAGTAAGGAAATTCAAACAAATTTTACTGGAACTGAACTACCTGCATGTTGCACATCTTTCTTGTACTCCGGCCTGAACCAAAATACTGAGGCTGTGTTTAGATCCAAACTTTCAACTTTTCTATCACATCAACCTGTCATACACACATAATTTTTTAGTCACATCGTACTAATTTTAACCCAAACTTTCAATTTTGAAATGAACTAAACATAACCTAATTATGAATGCTCCTACTACACGTTGCAAATGCCAATCATGGAGGGCATCTATGGCTTTCCCTGTGAGTTCCGGCAGTCCCAGTGTAAGCCACCCGTGCCGTCCCGGATTCTCTCCCATTACTACACCACAGCTAGCTCACCTAGCAAAAACCTTGCTCTTCCTCACACGGTCACCATGCTCGTGAGACCCATCCTTGCTGTTGCAGTTTGTTTTTATCCTTTGAACAGTGGATATGAGTGGACACTCCATGAAGAAAGCAATAGTTGTTATTACTCCCTCCGTTTCAAAATATTTGACACATTTAACTTTTTAGCACATGTTTAACCGTTGTTTTATTAAAAAAATTTGTGAAATATGTAAAACTATATGTGTACATGAAAGTATATTTAACAATGAATCAAATGATATGAAAAGAATAAATAATTACTTAAATTTTTTGAATAAGACGAATGGTCAAACACGTACTAAAAAAGTCAACGGTATTAAACATTTTAAAACGAAGGGAGGTGTTAAACATTTTAAAACGGAGGGAGTATATGGTAAGCTCCATTGCCAAGTGCCAACTTGCCATTGCCAGATCTCGCATCTCATTATTTCGCTTACTCTTATACTTATACTTATAAGTTAAAATTTAAATTTTAAAACTTTTAAACTTGATTTTGTAGGTTTTTATCGTGATTTATTTTACGGTATTTACTTTTGTATCCGCTAAAGATATATAAAAATTTTGTCTATAAATTATTTCTTTATCTGTGTGGTACGAATAAGGATGAACCAAACTACGACCGCTCACATGGCAGGAAGTAGCAACTGATTTTTTTTCTTTCTTTCTTTGATGAGATGCTTCACCTTCACTGCTTGTCCTCATCGATTTAAATGCTCTCGCCGTGGAACCAACGAACTTATCTTTGTTCTTGATGCTGACATGGAATTATCTTGTTTTGAGAGAGAGGGATGGTCTGAACGCCTGATGGATGGAATCTCGGTGCTGAGTGGACATGAATGAATGATGGAATCTTACTGGAATCTGTCGGAAATTAGTTCAGGAGTTCAAGGAGTTCAGGGTGCATTTAGTTCACGCCAAAATTAGAAGTTTGATTGAAATTGAAACGATATGATGGAAAAGTTAGAAGTTTATGTGTGTATAAAAGTTTTGATGTGATGAAAAATTTAGAAGTTTTAAAAAAAGTTGGAAACTAAACCAGGCCTAAGTTCTAATGAAATTCACGTAAAATTCATTTTAAAAGAAACCTAAATCTCTTAATTTGTGAAAAAAAAACTACAAAACAATTCGGGTGTTCTAGATGGGCCTTAGTGGGTTCTCTTTGGGCCGGCCCCTGCATTTCTGTATACTGGGCCTAGATTTAGGACGTCACCGATAAGGTCATCTTCCAAGACAAAACTCCGGCGAGGGATGTGCCGGGAAGGGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAAGCGGCGGTGATGCGAGGGAGGAGGTGGAGGGGGATATCTTCGTGGAGGAATGCGCCCTCTCGGCGCCTCGTGGATCGGAGGTATCGCAGATTTGCTTTAGTGGGATTAGGTTTTGCCTTATGCTGTTTGGTACGATTTGGTAGTAGTTGGTATGAGACAGATTCGTTCTCTTTTTAGAAGAAAAGATTTGATGTTTTAGGAGTATAATGTAATTGGGCTACATGTGTGTAATTTTTCTGTTGGTATGACTGATTTTTATTGCTGATTAATCTGGCAAATTCATTTTTTAGGATATCTCCAGTAGAATTATCAGATCTACTAGTAGTTTGGTAATTAAAGTGAGATTGGCCACTTGAATGGTGGTAGTGCAAAGGCCAGCTTAAAGTTCAGAGTGCTCGCATTGAGACTAGTTTGATCATTCTATCGGTGAATAGTATATTAGTATGAACACATTCCCCATTGTTTTCTATTTCGGTTTTCAGGATTTGGTGGAGAAGGAGTGCCAGAAATGGCAGGGCAAAGGCGTGAACATCAAGTACGAGGTCAGAGGGAACAGGAAGGGTTACAAAGCCGGCGCGCTCAAGGAAGGGTTGAAGCACGACTACGTGAAAGAGTGCGAGTACATTGCCATGTTCGATGCCGACTTCCAGCCCGAGTCTGATTTCCTCCTTAGGACCGTTCCATTCCTCGTGCACAACTCGGAGATCGCCCTTGTTCAGACTCGCTGGAAATTTGGTCAGTAGCCAGTGCATATGCATTATTTTTGCTGTACTCAGCACTCACTATAGTTTAGCAAATAACAATGATGTTGTGCAATAGCTTAATTTATTTTTCCTTTTGCAGGGTGTGATAGCTTAAACTGATCTGACTATCTTCATGTTGTGTATGCAGTTAACGCTAATGAGTGCCTGTTGACAAGGTTCCAAGAAATGTCGTTGGACTACCACTTTAAGTACGAACAAGAGGCTGGGTCTTCGGTGTACTCTTTTTTCGGCTTCAATGGTACAGCCTGTTGATCATGTATATACTAGTTAGAAGCTCGTCCATTTCCTGTAGATGAGAAATATGCATCATACCCATGCTAATATTATTTTAGACAAATTAATGTGTGTTTCCTTTCATTGAGTACACCTTTTGCTTTAGTTACAAGAAGCACCCGACAAGTTCTTTATAATTCTAATTGTAAAATTAGCTTTTAGACTACATTTCTATGTGACAATTTGGTGACCACAAACCATGATAAATTTGCATTCTAGAGTTCAAATAATAAAATAATATCAATTCATGGAAGAACCAATGTGTAATATTTTAAATAACTTCATGGAGCACTTGGTAAAAAATTGAGTGCGGAATTGGTGCCTTGGTGGGGTTGTAGATTCACTGTCACCACCATTGCGTTCTTTAAAAGTACAGATAGGTCACCCAAACATCCAGATTTGCACATTATTTAGTAACTGTTGGGCTTAAAAAACAATGTTTTCACCTTTCAGGGACTGCTGGTGTCTGGAGAATTGCAGCAATTGATGATGCTGGGGGCTGGAAGGACCGGACAACTGTGGAGGACATGGACCTTGCGGTTCGTGCAACATTGCAGGGATGGAAATTCGTATATGTTGGTGATGTCAAAGTATGCCTATGCTCCTTTACTTGATTAATGGAAATTAGGTATCTTGACAATCAACAGACATAATGATCCACTGAATACTATGATGTTTTGTGGTTAGGTCAAGAGCGAGCTACCAAGCACATTCAAGGCATACCGGTTTCAGCAGCACAGATGGTCATGTGGACCAGCAAATCTGTTCAAGAAAATGATGGTAGAGATTTTAGAAAACAAGGTTTGTGTTTTGACTAGGCTATCTACTACCTTTGGTAAATGGATCGCATCTTCTTATTGGCTTACATGCTTACCCTTTTTCCCTGTGTAGAAAGTGTCATTTTGGAACAAAATCCACCTTTGGTACGATTTCTTCTTTGTTGGGAAGATTGCTGCTCACACAGTGACATTCATCTACTACTGCTTTGTGATCCCGGTGTCCGTTTGGTTGCCTGAAATCGAAATTCCTCTCTGGGGGGTTGTCTATGTTCCTACAGTCATCACCCTCTGCAAGGCTGTTGGAACACCCAGGTAACTAGCATCCCAATATTCAAGTTTCAGAATGACAGTGCTAATGTTGCTTTCAGTTAACACCTGTTTTTTTTTCTCTGTTTCAGTTCATTTCATCTTGTGATCCTCTGGGTCCTATTCGAGAATGTCATGTCATTGCACCGGATAAAGGCGGCAGTAACTGGTATTTTGGAGGCTGGCCGAGTCAATGAGTGGGTTGTCACCGAGAAGTTGGGAGACGCCAACAAGACAAAGCCAGACACCAATGGATCAGATGCTGTGAAAGTGATTGATGTGGAGCTAACAACGCCTCTAATACCAAAGCTCAAGAAGAGACGAACGAGATTCTGGGACAAGTAAGCAAAGTTTATTTTCAGAACTTTCAGAGTTAATACAATATTATACATTTGAAGTACTAAATACAATTCTTTGCCAACCTATGAGAATGCACATAATTCAAAGGAGACAAACGTTCTTTTTTTTTTGGGAGAGGGGGTTGGGGGGGGGGGGTATATTTAACTGCCTTTTTTTTTTGCTAATGTTGATACATGTCTTCTTTATATCAGGTACCACTATTCAGAAATTTTTGTTGGCATCTGCATAATTCTGTCTGGTTTCTACGATGTGCTTTATGCAAAGAAGGGATACTACATATTCCTCTTCATTCAAGGCCTAGCTTTCCTCATTGTCGGTTTTGATTATATTGGCGTGTGCCCTCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028723