BGIOSGA028725

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Revision as of 08:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028725| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028725, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA028725

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028725, complete gene.

LocusTag

OSJNBA0016C11.3

Ensembl Transcript ID

BGIOSGA028725-TA

Ensembl Protein ID

BGIOSGA028725-PA

Length

3533

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22522799..22526331

Sequence Coding Region

22522799..22523288,22523529..22523641,22523734..22523841,22523979..22524033,22524258..22524452
,22524867..22524964,22525709..22525905,22525984..22526070,22526163..22526331

Genome Context

<gbrowseImage1> name=IndicaChromosome08:22522799..22526331 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:22522799..22526331 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCCCGCCGCGCCCGCGGCCGCCGCCTCCTCGCCGCCCTGCTCGCCGCCGCGTTCGCCGTCGCGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCGTCATCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCTCCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGGCTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCCTGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCATGGCCACCGCGGGGCTCCGGCTGCTCGACGCCGCGGTGGCCGAGGCTGTGTTGGATTCGTGCAGGGTGTTGCTGCGGGGATCGGGGTTCCAGTTCCAGGACGATTGGGCCACCGTGATCTCAGGAGCTGAGGAAGGGATGTATGCATGGATTGCGGCAAATTATGCGCTGGGTACCCTAGGCGATGACTCACAAGATACTACGGGGATAATTGAGCTTGGTGGAGCTTCCGTTCAGGTAACTTTTGTTACGGACAAACCTTTGCCTCCAGAGTTCTCTCATACTCTGAAGTTCGGTGATGCCACATATAATCTGTACAGTCACAGCTTTCTACAACTTGGTCAGAATGTTGCGTACGAATCACTCCATGACATGCTGAGCACACCTGGGCATAAATCAATGGCAACACATTTAATTTCTCAAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTAAACTTCCTGCCAGTGTTCTTGAGTCGAAGGTTGAGTACAGACCTTATGCTCATGCTGTTGGTAACTTCTCCGAATGTAGATCTGCAGCACTAACACTATTGCAGAAAGGAAGAGAGGAATGTAGGTACCATGAATGCCGTATGGGAGCAGCATTTGTACCAGACCTTGATGGGAAATTTTTAGCAACAGAGAATTTCTACCATACTTCCAAGTTCTTTAGGTTGCGTTCTAAGTCTTTTCTTTCTGACCTGATGCTGGCTGGGGAGAAATTTTGCCGAGGAGACTGGTCAAAGATTAAAAAGGAGTACCGTTCTTTCAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGATGATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGACATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTCGTCGCTGGGATTTGGTGGAGTTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTCTCGTAG</cdnaseq>

Protein Sequence

<aaseq>MGSRRARGRRLLAALLAAAFAVALLLLVPRSPRRRPHEYGVVIDAGSTGSRVHVIAYRSSSSSPASALPRIDWARTASMKAAPGLSSFASDPGGAGRSLAPLLEFARRRVPPESWAETDVRLMATAGLRLLDAAVAEAVLDSCRVLLRGSGFQFQDDWATVISGAEEGMYAWIAANYALGTLGDDSQDTTGIIELGGASVQVTFVTDKPLPPEFSHTLKFGDATYNLYSHSFLQLGQNVAYESLHDMLSTPGHKSMATHLISQAKYRDPCTPRGFSPMEGAVKLPASVLESKVEYRPYAHAVGNFSECRSAALTLLQKGREECRYHECRMGAAFVPDLDGKFLATENFYHTSKFFRLRSKSFLSDLMLAGEKFCRGDWSKIKKEYRSFNEGELLLFCFSSAYIVALLHDTLKVPLDDKMIDVANQIGGVPVDWALGAFIVQKASNQTDMLHPEGEKISPEDGIRHGERPVHHNQGETMSLARRRWDLVEFLRWGASDRVCKFS</aaseq>

Gene Sequence

<dnaseqindica>1..490#731..843#936..1043#1181..1235#1460..1654#2069..2166#2911..3107#3186..3272#3365..3533#ATGGGCTCCCGCCGCGCCCGCGGCCGCCGCCTCCTCGCCGCCCTGCTCGCCGCCGCGTTCGCCGTCGCGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCGTCATCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCTCCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGGCTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCCTGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCATGGCCACCGCGGGGCTCCGGCTGCTCGACGCCGCGGTGGCCGAGGCTGTGTTGGATTCGTGCAGGGTGTTGCTGCGGGGATCGGGGTTCCAGTTCCAGGACGATTGGGCCACCGTGATCTCAGGCATGCTACATAATGAAAGCGTAGAATTCTTATCTTTTGTATATAGTGGAAAAGTGCGGAGCCACAGTTCTTTCATGCTACTGATCAATACGATATCGAATGGAGTTCATTTCAATTGCCTGTTTAGGGATGGGATTGTGTTTGATCTGGGCTGATTTGTGCGCCTGCGTGCATGATAGTTTGGAATAATTGGGTACTTTTGTTCAGGTGATCATAAAATTGCTTATTACTTTCGTGCAGGAGCTGAGGAAGGGATGTATGCATGGATTGCGGCAAATTATGCGCTGGGTACCCTAGGCGATGACTCACAAGATACTACGGGGATAATTGAGCTTGGTGGAGCTTCCGTTCAGGTTTCATGTATCGTTTTCACACGAAGGAATTGAACTTCATGCAATGAAAGTTTGTCAGGATGTCTTATTATTGTACCCTTTTTGTTGAATAGGTAACTTTTGTTACGGACAAACCTTTGCCTCCAGAGTTCTCTCATACTCTGAAGTTCGGTGATGCCACATATAATCTGTACAGTCACAGCTTTCTACAACTTGGTCAGGTGATTTGTGCAAATATTTATTATTGTGTATTTAACTGTTACCTGTGATGAGCTATGATCATTATCTTAGTTTCATGTGGCATCAATAAACTTGTGGGTAAAGGTATGTTACAATATCTTGCTTGTTTCCTGTGCAGAATGTTGCGTACGAATCACTCCATGACATGCTGAGCACACCTGGGCATAAATCAAGTAAGTTGATTTGTTAATATATGTGTAGTTGCTAATGTTACTGATTGAGACTTCACTCCATTCCAAAGCTTAGATTTTAGTTGTTTGCTCATTTAATATGCCATTGTCTCTTTTCCTTTTATATGGTTCCTTTCTATGTCCATGGGATACACTTACCTACCCTGTAAAACAACTAGCAGTGCAATTCTTTGGTCTTTCTACTTAAGATTTGATTTGTTATGCAGTGGCAACACATTTAATTTCTCAAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTAAACTTCCTGCCAGTGTTCTTGAGTCGAAGGTTGAGTACAGACCTTATGCTCATGCTGTTGGTAACTTCTCCGAATGTAGATCTGCAGCACTAACACTATTGCAGAAAGGAAGAGGTATATATCTGCTCTTGCTGCATTGAGCTGTCCTTTAGTTAAGAACATATGTCACCCTTCAGAGGAAAATCTTTAATTTAAAAAGGTTATTTAACTGATGAGATATTTTGTGTTGAGGAGTAAACTGTAAAGTATGAAAAATACATGCTTTGTTGATAAATGATCAGAAGTTCTCTATACTTCTTATTATCCTTGAGAAGATGACAAAAAGCAAAAGCAAAGTTGTCTGTACTGTTGAATTTGTTTGGACCACAACAGCCATGTTCTGTTCTCTAAACTCATTCCTAAGGTTGCTATTTCTTGATTCATGATTTGCAATGTAAACAATTCATTGGTGTATACCTTTTCTGGCAGTTTCTTGTTCTTTGATTCCATAATATAATAAAAGGAGCTGAGAATTTCCTCCTGTTGCAGAGGAATGTAGGTACCATGAATGCCGTATGGGAGCAGCATTTGTACCAGACCTTGATGGGAAATTTTTAGCAACAGAGAATTTCTACCATACTTCCAAGGTTTATTTCCCCTCTCTCCCTCCTTCTGGTTGGCCATTTGGGTGTCTTTCAAAGTGTATTTGGTATGTGTAGGGAAGACGAGAATTCCAAAGGCAACCTTTTGGCTTTTCACCTTTTTTGGGATAAGTTCAATATCCCCATAGGTCAGAACCATATCTCACAAGACACAACACATGGAACTCACTATGGATGTTTTCGGTTGTTGCCAGTTGCCACCACTGGTGGCAACACGACAAGGACAAAAGAGGATAATGATGACTGATCAGCTAGTAGAAAAGAGCGAGAACATGATAGGCTGCCTAGTGGATCTCATGTTCATGATTTCACATCTGCTGACATATTAAGAATTCTGGGAAAATCTTGGAAAATTAAAACAAGAGGATTGCATTTATGCAATAAAATGACTTAGCAGAATGTAGAGTGCCCATGAATCAAAATGGTATGCTCCTGTGCCTCAAAATTTGGTTAGTTCCACAAAATTCGGTTAGTGCCTTGAGATGTGTCTTTATAACGTTTGCCCATTGAGGAAAATGATAGTGCAGCCATTGTAATATTTCTACTCACAGGCCTTCTGCGCCCTCTTTAATGTTAATTTGTTTTATAGTAGGTTGTGTTTTGTAGCATGTCATTTACTATTAGTCTATCGTTTTACTTAGATTCAGTTCCCTGGGTCTGCGAGGATGGTCGGCTTGAACATTTCAACTTTTTTGTGGAACTAATTTTGGATCCTTCATTACTTGGCAGTTCTTTAGGTTGCGTTCTAAGTCTTTTCTTTCTGACCTGATGCTGGCTGGGGAGAAATTTTGCCGAGGAGACTGGTCAAAGATTAAAAAGGAGTACCGTTCTTTCAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGATGTGCGATCTTTTCTGCTGTTCTAATATTTCTATTTCACATTTTGAACTTCAGGATTTAAAATGTTCATTTTGTTTCAGGATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGAGTACTCAGATTCATCAGTTCCATATCTAAACAGCTATTACTATTCTGGGTTGGTTCCACTCCTCTTCATTTCCGCTGTCGTTCTATTTACAGCATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTCGTCGCTGGGATTTGGTGGAGTTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTCTCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028725

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028725&oldid=34982"