Os09g0103800

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Revision as of 07:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0103800| Description = Peptidylprolyl isomerase, FKBP-type domain containing protein| Version = NM_001188779.1 GI:297726688 GeneID:9267062| ...")
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Gene Name

Os09g0103800

Description

Peptidylprolyl isomerase, FKBP-type domain containing protein

Version

NM_001188779.1 GI:297726688 GeneID:9267062

Length

5607 bp

Definition

Oryza sativa Japonica Group Os09g0103800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:413723..419329

Sequence Coding Region

413723..413738,413867..413934,414849..415144,415275..415400,415484..415566
,416514..416628,416755..416847,416963..417021,417609..417684
,417812..417901,418050..418202,418294..418480,418752..418839
,419077..419125,419233..419329

Expression

GEO Profiles:Os09g0103800

Genome Context

<gbrowseImage1> name=NC_008402:413723..419329 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:413723..419329 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccttctggggattggagttgaagcccggtgaggcctacacccatcactccgcgcccgcccgcctccggattacccaggctgtgctgggcagttgtgatcaaggttggactacactacaatgtgataccaatgacagggagactgtgcgcctctgtgttttaaatcctgggcttgctgtggcatgtcacctagagctggaattacagaaggatgagaatgttctcttatcagttgacggacagaactcgatacacctgtccggatactacacctgttcccatagtggcaatcatgggcgcaatagtcagaagcccactagtaaagctgtaggaagtactggcttcaataaaaagcatcaagatatttctgacaaggcaccagtgatagaggagatactagatgaccagacagtacagcagcaacagcagcaaggtgttaacatcagctcgaaggatgtagaaccttctcataaaaatggtcatggacaaaatagtgaatgggccacttgtggtaatggtactgatgatgacaatgataataatggtgctatgttttatccttcatctcgcaacaaaatggaagtagacgagcccacaggaagtaaagacaatgattatgattattggcttcctttccttgatgcttctgtaaagagaaaggcttctgaaactgatggagaaaatgtgtacacagagaagggggagttgaagacgccaaagatagagaatgtgctaagtgatcaaagtgtggatatggatcaagttaatgaacaaacgtgctcaaaaaatgtggaacctaatgaaattgatgatgtaaagccaactcgaggtcacaagaataccatggaagtagtacttcctctccttgattcttctgtaaagagaaaggctgctgagattgatggagaaaaggtgcaaatagagaaggccaaattgaagatgccaaagacagaggatgtaccaagtgatcaaaataatgctaatcaagtgaatgaacaaatatgctttaaaactgtggggtccaatgcaattgatgacgcaaagttaagtctaggtcaccagaataccctggaagatcttgacaagagtcaggagctaaatgtttcacaaacaaaagggcagaatgatgttgcagatcaaattacaaatcaagacacgcctacaatcacgagctctgatgaacgctacatttttactggtgctcttgaaactgatattgaacaaaaaaatcgaggggctgaaaatgaacaagttgaggtccatcgttgcccctttgaggtgcttgataatggtatcaaagtggagcatctggttgaggggaatgctaaagccaaagttgcatctaagggcaaacaggtttgtgtgaggtattgtggtcggttgatcaatggtgaagttatcgaccctactaaccttgacgacgacacccatacattcaggcttggcatgcgtgttggtggcaaaaggagactcacaatccctcctgctcaaggctatggtgatgttgcgacaccaaagataccagcaaactcttggctcgtgtatgaagtcgagttgctggaagtgaagcgagccaaaagggcacgttga</cdnaseq>

Protein Sequence

<aaseq>MATFWGLELKPGEAYTHHSAPARLRITQAVLGSCDQGWTTLQCD TNDRETVRLCVLNPGLAVACHLELELQKDENVLLSVDGQNSIHLSGYYTCSHSGNHGR NSQKPTSKAVGSTGFNKKHQDISDKAPVIEEILDDQTVQQQQQQGVNISSKDVEPSHK NGHGQNSEWATCGNGTDDDNDNNGAMFYPSSRNKMEVDEPTGSKDNDYDYWLPFLDAS VKRKASETDGENVYTEKGELKTPKIENVLSDQSVDMDQVNEQTCSKNVEPNEIDDVKP TRGHKNTMEVVLPLLDSSVKRKAAEIDGEKVQIEKAKLKMPKTEDVPSDQNNANQVNE QICFKTVGSNAIDDAKLSLGHQNTLEDLDKSQELNVSQTKGQNDVADQITNQDTPTIT SSDERYIFTGALETDIEQKNRGAENEQVEVHRCPFEVLDNGIKVEHLVEGNAKAKVAS KGKQVCVRYCGRLINGEVIDPTNLDDDTHTFRLGMRVGGKRRLTIPPAQGYGDVATPK IPANSWLVYEVELLEVKRAKRAR</aaseq>

Gene Sequence

<dnaseqindica>1..16#145..212#1127..1422#1553..1678#1762..1844#2792..2906#3033..3125#3241..3299#3887..3962#4090..4179#4328..4480#4572..4758#5030..5117#5355..5403#5511..5607#atggcgaccttctggggtaaaaaccctcctcctcttttttcgctttgcttttagtatttattttctccatcaccattctttacacatcactcactagctactatggtttctttcattatctactatatatatggcggtgggcaggattggagttgaagcccggtgaggcctacacccatcactccgcgcccgcccgcctccggattacccaggtaccaaaatcaccttacttcttaatctctaaagaaaagctgaaatcgaatatgaactgtgtcttgtgattgtattcaatggacgcacttcggcgctttgctactacttccttcctaattttaatgcatccaacaccatcttcagctggctctcgacaataaaataaatacagatttgtgtaacatatcaggatgttttcttacagctttttctgacacatattcttatgcatctgcttcattaaaatttaatgcctatatttttcatggtctacaagtgttgtctacaggtgaaaaaaccaataaaaagagagaacgactacatctttctcgaaaacgttactagtattttaagataacagcgtatacatttttgtgaatattacaatgagttttaagggcacctcaactctgtagaaccctctaaaagtatacttcttttgatgccattacctctataggtacttaaggagtatcgtgaccctcaaattggtcccataaactctatgttttattccttagaacaaactctaaaattggagccatttccattttctccccctaacacccactttcccaattgttctaaatcagcttcaaaatcccccctttctctctcgccttatgacacactttggaacaacattggagttgcttgagcaaagtggaacacactacaagatcgctagtgttccttcgaaaaatttacaaaaactattttgtaattatgtttccccattgattgacacaagcctgatcatgcattgcattgtagaggttcctccctttctgttttatggatatataatagtggtattctgtttctatttgaattttgaaaactagtaaaatcccaacaaaacaactattcacaattatcttacgatatgatttcgatatttcatattttacaggctgtgctgggcagttgtgatcaaggttggactacactacaatgtgataccaatgacagggagactgtgcgcctctgtgttttaaatcctgggcttgctgtggcatgtcacctagagctggaattacagaaggatgagaatgttctcttatcagttgacggacagaactcgatacacctgtccggatactacacctgttcccatagtggcaatcatgggcgcaatagtcagaagcccactagtaaagctgtaggaagtactggcttcaataaaaagcatcaagatatttctgacaagtatgtatatctttaattctatccttcagtttcttttttgtttcattcaaagtagcattcgcttctttcttgaaatccaatagctcctttgctttgtaaacattctaacgcctagtggtgggaaatgcagggcaccagtgatagaggagatactagatgaccagacagtacagcagcaacagcagcaaggtgttaacatcagctcgaaggatgtagaaccttctcataaaaatggtcatggacaaaatagtgaatggtaactttcttggatgatgcaattttccatttttcttcaatgcagcatcatgtgttcttcccttctatttaatgtgtctacagggccacttgtggtaatggtactgatgatgacaatgataataatggtgctatgttttatccttcatctcgcaacaaaatggaaggtacatatttcacctatgtaaccatgtaatctaagttatttcttttatcgttttcttttcatggctttaaagccatgatcacctgagaattcttccttccgtagcttttctgatttttacttgtatgctaagttgatgctacagggtgtcatttaccattggtcattgcgctgatttttgctataactaacaaaactttcgcatgtatcgtgtttaatgattattccttaatattactgttttggatgttgattcatggatagattaaggggctgacattgggttaaaggcgaaatttttttcattggcgccatcatgtcctgatcgctagcagactctgatcaagttgactttatgtttctttattgcttcatgtaatggggctacgtctacgtgtatcccttttgtagagagggttcccctactatccacatgaatagtaatcgtaaaaagtaacttgccccttcagattgtaatctagtttctaaaaaatctatgtctctatctaacttatttaactactaataactttttggactaatatgtaggatattcaattaacaaatccctttccctaggaaaataattaatcatttgggaaataggggtactgtcaatgcacagtacttctaccataagcattagtataattatgttctcatgatgtatcctatgcatgatatattgtcattgagtgttggattatcaatgactctcataccaaacataataaagaattgagctgtcaacaaaaatataataaagaggtgatatttgattgctttgtcttgacttgtgtctaattcatgcaagtcttgagaaaaactgacagcaaagcatgattgattgttgatgctattttccattttttttcttcttgctggtgatgccaatgtatattgcccacataaatgctcatcaattgggaatttatattctttatgcagtagacgagcccacaggaagtaaagacaatgattatgattattggcttcctttccttgatgcttctgtaaagagaaaggcttctgaaactgatggagaaaatgtgtacacagagaagtatgcaccttttgaattaagtccttcaattctgttgttgtttcatagaacatgaagcaacatttgcttcattggaatttagtttatctcctttggatgtattgaggtattgtcattatgtaataggggggagttgaagacgccaaagatagagaatgtgctaagtgatcaaagtgtggatatggatcaagttaatgaacaaacgtgctcaaaaaatgtgtaagtatatattataaaaatcttgaatattcgaatgatttgcataatgctcaattatttcccaaatacagtgttttttttttataatgcagtgcatatttttcttgttcaatagggaacctaatgaaattgatgatgtaaagccaactcgaggtcacaagaataccatggaaggtgatgttcttgacagtactactgctaccataacattagtattatattatgcatacatgatgcatcctgtgcatgttacaatgtcatgggtgctgatttatattctctgttgatggaacttccaggagatggaattaagcctatgaataaaccacataccaaatataataaggattagtgattttgtttggagggtttccatttaagagtacaaggtccacttatagaagtaatataatgaaacctggactaaaacttgtttgcccaaactggaattaaactgaaactctaattgactataagaggtaacctcagaggaacaatggttatattggttaagtgggggagacaaactttaagcttgactttactagctcagtccttacttatgtctaatgcatggtcgtttcaccccccccaccccccacaaaaaaaaaaaaatctgccagcaattactgattgtcgatgctattttgcattatctattcttctctggttccatctctctccaatgaatttataggtgatgtcaatgcataacacccatataaatgctcatcagttgggaatttttattctttgtgcagtagtacttcctctccttgattcttctgtaaagagaaaggctgctgagattgatggagaaaaggtgcaaatagagaagtatgtaccttttgataagtcttgtatttctcttcttgtttcatagaatcatagatatgaagcgacatttgttgctggaaattaagtatctcctttgctatgtttaagtcttgtctttgtctcatagggccaaattgaagatgccaaagacagaggatgtaccaagtgatcaaaataatgctaatcaagtgaatgaacaaatatgctttaaaactgtgtaagtgtacattctagaatcctgaaaattcgaatgacttgtgtttatactttgttggtaatcctctttagtggaacacgtgcttatttcttaaatacaattggtactttggatgtataatgccgtgtatatttttcttgttcaatagggggtccaatgcaattgatgacgcaaagttaagtctaggtcaccagaataccctggaagatcttgacaagagtcaggagctaaatgtttcacaaacaaaagggcagaatgatgttgcagatcaaattacaaatcaagacacgcctacaatcacgtaatgaatgaagctatatatcacttcatttaccaaaatttctgtgcttcttaattttatgtaaggtagaggacttttctatattttgcaggagctctgatgaacgctacatttttactggtgctcttgaaactgatattgaacaaaaaaatcgaggggctgaaaatgaacaagttgaggtccatcgttgcccctttgaggtgcttgataatggtatcaaagtggagcatctggttgaggggaatgctaaagccaaagttgcatctaagggcaaacaggtcagcttgaacattcttacttatattattcaacctttgttttattgtaagtctattttgtctacaaatacatcacttatgcacatgttcaacttgtccttagtagggtggtaccaccttattaaggtcataagcatccttttttctccttattgttgccttctcttcaatcttaggcaacacctaggcttgccccataattttcatatgccagatccactgcccaagttaaaagaacaaacaatctaagtatctaagattgcttatgcaggtttgtgtgaggtattgtggtcggttgatcaatggtgaagttatcgaccctactaaccttgacgacgacacccatacattcaggcttggtaaaaggattgacaaatctctctctctttttccatcctttgattctttggacactgtacattttcttttggttggctgcaggtgcgggtgaagtcattcctggatgggatattggcattcttggttgttgtctttactcacgattgccactttaatcctattgtaatactttgctgttgaaatcaagtacttattctattactcttaacacaagttttatcatgttttctctataggcatgcgtgttggtggcaaaaggagactcacaatccctcctgctcaagggtaagtgtttggttcccttcgaatccctcaatattgtatttctctacgtgtttgttgcaggacatgaaaggcaatacctgattttcttggttgcatttgcttttcagctatggtgatgttgcgacaccaaagataccagcaaactcttggctcgtgtatgaagtcgagttgctggaagtgaagcgagccaaaagggcacgttga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0103800, RefSeq:Os09g0103800