Os11g0166300

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0166300| Description = Conserved hypothetical protein| Version = NM_001072367.2 GI:297611296 GeneID:4349870| Length = 10710 bp| Definition...")
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Gene Name

Os11g0166300

Description

Conserved hypothetical protein

Version

NM_001072367.2 GI:297611296 GeneID:4349870

Length

10710 bp

Definition

Oryza sativa Japonica Group Os11g0166300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3167866..3178575

Sequence Coding Region

3167866..3168117,3170545..3170613,3177823..3178415,3178566..3178575

Expression

GEO Profiles:Os11g0166300

Genome Context

<gbrowseImage1> name=NC_008404:3167866..3178575 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3167866..3178575 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgacggggtacggtgacgccccgaccgccgacgatctggccgcgtacgaccaactgctcggcctccgccacactcgccacatggcggaggtcttcgccgtgcgcctgccgcacgccgccggactccgcaggccgccgccctgcggcaccatcagcttctgcggcggcaaccactgcaacgacgtcatctacagccgcagccgtacggacgactccacctacccaccgccctgcgacacccatggattcggcacctattattttgctcacatcgaatacgtccttgtcatcaagactgtttccgaggattcgggcaacatcatgctaactggtccatcgtttgccacctcagcatatgcccccatcatctttaccctttgtctccatgacggtagccaagaagaggataacaatgagaatgaggtggaggtaatatacaatacctgcaacggtctcttcaacaactacaacagtaccataatcgagacagtcaacactgggtatggtcccgctgaggtgagctacgctgtgctgaccaacgccgttgaaggacaggtcacagtcaagctggtccgtcgagatgaacacaacgaccccactgcaatcaccggtgttcttgggaggatcatcacgcgcagcaagctcctcaatgttggttgtgtcctgttctacagcgactttggcagcatcccacacataggatcagacgggttgatcccattggcgaggcgtgcgcttgcagtgccagctatgatgccgttggacttgcgttcttcttccggtgatgagattgtcagagctgcagtcgagtttgaccctacgactagtgatcaacatgtggaacgtgttattggaatgggtggtcatgagatccaagtgacaatctcatggttggacttcccttggttcgattga</cdnaseq>

Protein Sequence

<aaseq>MAAATGYGDAPTADDLAAYDQLLGLRHTRHMAEVFAVRLPHAAG LRRPPPCGTISFCGGNHCNDVIYSRSRTDDSTYPPPCDTHGFGTYYFAHIEYVLVIKT VSEDSGNIMLTGPSFATSAYAPIIFTLCLHDGSQEEDNNENEVEVIYNTCNGLFNNYN STIIETVNTGYGPAEVSYAVLTNAVEGQVTVKLVRRDEHNDPTAITGVLGRIITRSKL LNVGCVLFYSDFGSIPHIGSDGLIPLARRALAVPAMMPLDLRSSSGDEIVRAAVEFDP TTSDQHVERVIGMGGHEIQVTISWLDFPWFD</aaseq>

Gene Sequence

<dnaseqindica>1..252#2680..2748#9958..10550#10701..10710#atggcggcggcgacggggtacggtgacgccccgaccgccgacgatctggccgcgtacgaccaactgctcggcctccgccacactcgccacatggcggaggtcttcgccgtgcgcctgccgcacgccgccggactccgcaggccgccgccctgcggcaccatcagcttctgcggcggcaaccactgcaacgacgtcatctacagccgcagccgtacggacgactccacctacccaccgccctgcgacacccatgtaaaacttccaccttgtaggcagctaggtaatctcattcagaaaccggctttcatgcataaaccatcacacttaatttgtttcttgctttcaaattctgaaatataatatatctataatagtcaaaactgtaaaacagagtctaatcctgcataatgtgtaacatgacccaaggaaatgaatccacaagactaatattccgatcgaatgaccagtgattccgaatgagcaattcaggatttgtgtagctcctcaatatgttccggacctgtaattgttggtgctgcatattttcttatttagtgcaaatgaaaacctcaaaatttatgaaatcgtatttacaactagcattcatattaatcaagaaagaaatagagattaattttagtttttaaccaaagtttcgttttggtttagcatattttcactctggacacccttttcaaacatattcactttagtcccattttcctgaataccctttcgctttgggtatataaaggacaccaatgcaacggcattatcgagatgagcatgaccaaggtgcagtttgtaggatcaaatcacaataactaagccaaccagagaggggtgaatggttggtatacccaaaaaccgaaaacttttagcggaaataaaagttaccctcgaaattgacggaagtcggtctgaccgagattgatctgtcggtctgaccgagtggtgccgtcggtctgaccgagattagatctctagtctgaccaccgagatcagctaccgctcgctgtcgccgccgccggtctgaccgcctcgccaccgccggtctgaccgccgcttgccgctggtctgactgccggtatatcgccggttagaccgccgaaacccggtaaaacacaaatcgaagaactcttaaagtagatgacgactttattgattctctctgtgtttacaaagtgcaccaacagcactccctacaaaaatttcgactaaactcgaaaccctaactcaaaactcaactcaattgctctcaaaagcgatatcgggaagcatcacgctccccctctatttatacccgaggtaggcagcctaaagccatgaaccaaacttatactaggagtgctaaacaccttaggaaactctctagtataagaaacaaactttacataaccactcataccaaatttggactccttccgaattcgactccgcatcccatatgcacacaataactccatcgtatgccatatggaatctccatcaaccatgtgcatcaactctagcctaagtatcccgcatgatctctgaccaccaggacgtcgtcttatccccaagctgactcccggtccatcaccgcaaatactctcccgaggcatcgagtcacctacacatgaaataaacaaagaaaccatattccgagaccaagctatcacaacttgagtcattagcagcaaacaatcgtatagtatccatctagaagccataatcatgaaataatcacggatatccaaacaagcaacccaaatccgaaaccgacacagcgtcggccggtcagaccgcgggctaggccggtctgaccgcgcgatacacgccggtctgaccggctactagagcccggtctgaccagtcacatgaaataacagaacctgcgattcacctataaatccaatcatctccaaaaccacttcgtgaataaattctaaatatcaaaaccaataatctccgatgccaattgttcatcacagaataataatcaaaaacacctttgattttacaatctcccccttgatgaacacattggcaaacccatcaaaaatgttttggtgtttggaaaaaaaaataaaaataaaagtggtaaaaagcacacttcgtacaaacgtacatatcgtgctcaaaaattcaaaaatccaaaagaaaacttcttcccctttctaaaagaaagaaattcccaattgaaccaaaaacatgctcttcttaaaaaaaaactcttcgcttctccaaaaattcaccttgcttctttaaaactcatctcttctcccccttttgacaatgatttcatcaagcataggaattatgttctttaaagtataagagcttagcatacatatagcatatcaagtcatgtattgcaataaaaagaagataagcccatttataacataacaagcatgcattaaagtataaccataaaataaagattttacaattaagcttgaatcatcaatcaaaattcatgatttcatacgatttataatgcaatatcttaacaagcacataggttgaagaataaacactaaacacatatacctattgcatttatcactctttctcaaataacctttagcacaaaacaacaaagagaatttttgaactttttcttttcttgagcctttttgcttatatttttctcttttattccgggtacgtccctgtcatcaagactgtttccagggattcggcacctattattttgctcacatcgaatacgtccttgtcatcaagactgtttccgaggattcggtattcattttttttatattttttattctctttttcacaatgagcaattaaagctatttgaggaataacaattcaataaagcatatatatagagcatttataaatcaaaccatatgctagcatcaacattgcatatttacttaattcaagtatagaatttaagtgccatgcatcatcgcccttaaaagcaaaatctaaatctcatgaaaagactagaatacatacaagctatgctagagacaaataaaccttcaaaatattgttagcatgcacaagaaaataccatatgcataaacaaagctctattttctcaatttttctcattgtcatattattgcttgataaaaccatgaggtacaaactccccctcaaaccatgccaaaaggatgaattattcccaattcaccacgaagaaaagcaaaacgattagaatcgaaaagtttagtgaaaatatcagcaagttacaactttgtgtccaaaaactgcaattcaacatctcctttctcaacatgatccctcaaaaagtgaaaacgaatatcaatgtgctttgtgtgtgaatgttgaacaggattcttagcaaagttaatagcacttgtattatcacaaaagagaggtactttctcaaaagtaagaccataatctttcaaagtagataaaagccaaagaatctgtgaacaacaactagcagcaacaacatattcagattcagcagttgattgagcaacactagattgtttcctagaagaccatgcaatcaatgatgtaccaagaaatgacatgttccactagtatttttcctatcaattctacaacccccaaaatcagcatcagaatatccacttaagcatatagaagaagaagtagaataccaaattccaaattgaagtgtatgattcaaatacctcattattcgcttgaccgcttgacgatgtgaagcacgaggagaagcttgaaagcgtgcacacaaacacacaacaaattgtatgtctggcctagaagcagttagatacaacaaagatccaatcatacttctatattccttttgatcaacagcttcaccatcttcatcaggatccaatacagctgtagaaccaattggtgttgaaattggcttgcaattctccatcttgaaccgcctcaaaagatccttcgtatacttcgtttgatgcacaaatgtaccttgagatgtttgcttaatttgcaatcccaaaaagtacgataactcactcatcatgctcatctcaaattccctgcgcatagtctcagcaaactctacaaccaaagcgtgagttgaacaaccaaagataatatcatccacataaatctgaacaaaaagttgattatcaccatgcttaagaacaaaaagcgttttgtcaacctttcccattgtaaaacctttcacaagcaaaaagttcttaagtctatcataccatgctctaggagcttgtttcaagccatacaaagctttagacaatttgaaaacatggttggaaaaatcaggattttcaaaacctggtggttgtttgacataaacttcctcctgtataaaaccatttagaaaagcacttttcacatccatttgatacaatttaaaaccttttgaagcagcaaaagccaacaaaagtctaattgcctcaattctagcaacaggaacaaaagtttcatcaaaatccaaaccctccacctgagtaaaaccttgagcaacaaatctagatttatttctcacaattaaaccatcctcattttgtttatctttgaaaacacacttggttccaataatattatgtctagaaggtggttcaactaaagtccaaactttgtttctctcaaaattttcacgttcttcatgcatggcgttaatccacgattcatcagttaatgcatgtgacacatctttgggttcaaaaaaagcaacaaatgcagaatttgcacaaacatcatgagttgttaccttagaccttgtagtccgctcacctatattaccaataatttgttccggcggatgttgtcgttgaatgtgcaaaggagcagcgacttctgaagttgatccacgttctgtatcagtactggtcgaagtagtaatctctggaggaccatctcgatcagcatcaacagtacctgaacccgacgtccctggccggtctgaccgctcctcctgaggcggtctgaccggagttttgccggcggtctgactggcctgacgcccggtctgaccggccgagccgacctcgtcgtcgtcgttgtcgtcgctctcgtcttcaaaaatacgaccatcctccccctgaacctgtgactgtgtacctgcaatatcgggtctagttcctggactagcctcatcaaaaaaaacttcgcaaatctcaatgattttgttagtctccaaaataagtacatgatagccacgaatatgtgcggggtaaccaagaaacaatccatcggtagaacgtgcctcaaacttatccaaatttccagatttcaagaaaaagtacttgcaaccaaaaacacgcaaatgtgaaactttgggttgatgtccaaatcgaagttcataagaattttttccaagtttagatctcaagaaaacccggtttgaaatataacaagcaacgttaatagcctcagcccaaaattttttaggagttttatattcatccaacatcgttctagccatctcaaccaaaacacggtttttcctttcaacaacaccgttttgttgaggaacacgtggagaagaaaattcgtgttcaagacctttttcggtgcgaaattgttcaaaagaaacatttttaaactcaccaccattatcacttcgaattcttttcaaagaaccaggaaattcaagattcaatcgaagaaacaaaccacgaaagtattgaaaagcttcgtccttagttgccataaagaaaacccaagagtatctagaaaaatcgtcaacaataaccaacacataccactttcctccaacagattgcactctagctggaccaacagtgtccatatgtaatagttgtcctggtgcatccattatcacagaaacagtaggagcatgtgaagaagcaaacatcttagcatgacgacacggtgtacaaaccaaatcaagatctttcttaagtttaggcaaaccacgaacaagatccaaaccacttaacctagtgagatgatcaaaacaaacatgtccaagtctacgatgccaaaacatcacatctttatcaaacttagcaaccaaacatgttatcacaggtgaaacaggattttcaaaatcagttttaaatactcttccatagcgagaaatattcaacacagaatcaccacaagaatcgaaaactttacttccagttttcttaaagtgaacctcaaaattttcatcaacaatttgtgaaaccgaaagcaaattgtactttaagttctcaaccaaagctacattcttcaattcaaatttttcatttaccttaaccaaacctgtagcgagaatggcacttgtagaggcatcaccaaagatgatcaattcagtctttgatgccttctgaagtgaggagaaccaatttttatcaccggtcatgtgccgcgaacaaccggaatccacgatccacacgttttccttccttgccaccaaagcctacacacaagcagaagtcgaagcctcagtactggggttagaagataataaaaatttaggaatccagtactgagacacatgaccagtagatccaataggcatatatccatgtgcaaaatcaatttgagaattttcagaaaaattcctccgaggccggtttgaccgaggtatagtggccggtctgaccgggggccggtctgaccgcttctgtaccaccggtctgaccggtgcccggtctgaccaacgctcagtaccggtctgaccggtcgccggtctgaccgcgggacacactgcgatctgacctgtttcctcgagggaaaacccgatttttgccactttaattttgcaaaagcaatctctctctcctttttctgtttgtgagctaatctgaaacaaaaaccaacaatatgtccatcttttccacaaaaagaacaagtatatttttcacgatgattagacacattggtagcattagaagatttagcaataccagcaacaacaggagattttgcatgcacaacattggattttgaagaagatgcattcaaggtaaacatgataccagcagatttaaacacagttttgttagtatcaggtttaaccaaaatctcaccacttctagcaccaacacctaacacaacaggaggatgtctagaattatgagcataaggattaaaacctaaaccatggttatgtgtgctaatctttgattcatccaaaatcatgttgaggttctttttaccatcagaaaatcttagcaaataatttttcaaacaagaaaactctttttccaaattagcacaattttcacaatctaccatgacacctttgcttttacgacatttagggcaagaaagcacttcattgtttttcacaacatcttccatgaactcgacacgacctaaagcatctttcaatttcaacttattcaaattacatgttgagcaatccaaaacatcatgaggttgttttaacttcttagcaaaaatcatgttaaacatcaaactagcatgaaaagcaatttgatatttttgcaacaactttttagttaaaaacaactcatccaaagtgcgtgtatgcaaggcaaaactacaagcaagagaagatctatttttcaaatcatgtgcagcattaacatctttaatttttgaaatctcattcattaaaaccacacaatttgagcaatcatcatcattaggaataagagattttaacctatcaatttcagatttaagagattcaatgataaattcctgttttctatacatcttctcacacttcttattttttgcactcaaaatattaatagcttcctcaaaagcacttacctcattatcttcatactctgtatccgattcaccacgcgccatgaaacaaacaccggagatgttctttcccttgtcatcatctccactctcaccatctacatcacttagtggctcgaaggcggcgcaaacttgttaaaaagccttcctgagattctccagcttcctcccttgggatgaaccctttggcttgatgttgttggtcttctccaaagtcaaagtagacatgttaacagattcctgaatagatgtaactttcatctcccaaatagacatatcaagaccattcaaaaagtgacgagaaatctcagattgtggataattagcatcataagaagaatcaacagatctaagatcactcaaaattttattaaacctagaaagatagtcatccaaagcttctccaggtttcatctcaaatttaatgtactcctttttgaaaatatcacgacgaagttctttaatgttttttgttccttgatgaaagttattcaaagcattccaaatttcatgagcagttcgaaaatgcgcaacacgatcataatccgaacgagaaataccactcaaaagaatgttgcgagctttgcaattttgttcaaaaacaaatttttcagcagcagtattaatagcttcaggaatcacataaggatgagaaacttttcttcaaatatcataaacttcagccataatgtaagattgcatcctactataccaatgagaaaaatccgttccattgaaaacatgaggcttagttgaaaacctaacaggagtagccatggcaaaaactctagatcgataaaaatctaaagaagaaacaaggctctgataccacttgtaggatcgaatcacaataactaagccaaccagagggggggtgaatggttggtatacccaaaaaccgaaaacttttagcggaaataaaagttaccctcaaaatcgacggaagttggtctgaccgagattgatctgtcggtctgaccaagtggtgccgtcagtctaaccgagattagatctccagtctgaccaccaagatcagctgccgctcgctgtcgccgccgccggtctgaccgcctcgccaccgccgttctgactgctgcttgccgccggtctgaccgccggtatatcgccggttagaccgccgaaacccggtgaaacacaaatcgaagaactcttaaagtagttgacgactttattgattctctctgtgtttacaaagtgcaccaacagcattccctacagaaattttgactaaactcgaaactctaactcaaaactcaactcaattgctctcaaaaacgataccgggaagcatcatgctccccctctatttatacccgaggtaggcagcctaaaaccacgaaccaaactcatactaggagtcctaaacaccttaggaaaccctctagtacaagaaacaaactttacataaccactcataccaaatttggactccttccaaattcgactccgcatcccatacgcacacaataactccatcgtatgccatatggaatctccatcaaccacgtgcatcaactctagcctaaatatcccgcatgatctctgaccaccacggacgtcatcttatccccaagccaacttccggtccgtcaccgcaaatactctcccgaggcatcgagtcacctacacatgaaataaacaaagaaaccatattccgagaccaagctatcacaacttgactcattagtagcaaacaatcgtatagtatccatctagaagccataatcatgaaataatcacggatatccaaacaaacaacccgaaactgaaaccaacacagcgtcggccagtcagaccgcgggctgggccggtctgactgcacgatctgaccggtcacatgaaataacagaacctgcgattcacctataaatccaatcatctccaaaaccacttcgtgaataaattccaaatatcaaaaccaataatctccaatgccaattgttcatcacagaataataatcaaaaacacctttgattttacacagtttacggtggtacacggagagtaatcttgaggatgtggaaaaaaaaggagtccaaactgaaacaaaaaatgtataaaaaaaggcaaaaataaaaatatgggctaaatggtggtgtaacattgaacttcgtaaggagtccagtttgaaattttcactcttaaaattatttttgtgggattcaatatatttttatgaaaatcttgcaaaattcatgcttccaaataatgtctatgctagtttcaattggattttttttctcccaaaacagggcaacatcatgctaactggtccatcgtttgccacctcagcatatgcccccatcatctttaccctttgtctccatgacggtagccaagaagaggataacaatgagaatgaggtggaggtaatatacaatacctgcaacggtctcttcaacaactacaacagtaccataatcgagacagtcaacactgggtatggtcccgctgaggtgagctacgctgtgctgaccaacgccgttgaaggacaggtcacagtcaagctggtccgtcgagatgaacacaacgaccccactgcaatcaccggtgttcttgggaggatcatcacgcgcagcaagctcctcaatgttggttgtgtcctgttctacagcgactttggcagcatcccacacataggatcagacgggttgatcccattggcgaggcgtgcgcttgcagtgccagctatgatgccgttggacttgcgttcttcttccggtgatgagattgtcagagctgcagtcgagtttgaccctacgactagtgatcaacatgtggaacgtgttattggaatgggtggtcatgagatccaagtgacaatctcatggttggacttcccttggtagtgccctcatgaccatttactagtatagctactcatctgagagcactccaaagtagagcaatttgttaatcactattagtggtgctcttatcatttcttaccatttgaaaaggagactttactgaataaccgtcactcatcttctaggttcgattga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0166300, RefSeq:Os11g0166300