BGIOSGA028743

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Revision as of 08:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028743| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028743, complete gene.| tag = P0528B0...")
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Gene Name

BGIOSGA028743

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028743, complete gene.

LocusTag

P0528B09.18

Ensembl Transcript ID

BGIOSGA028743-TA

Ensembl Protein ID

BGIOSGA028743-PA

Length

4524

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22778948..22783471

Sequence Coding Region

22778948..22779101,22779569..22779762,22779869..22779997,22781652..22781771,22781851..22781987
,22782069..22782224,22782665..22783043,22783141..22783257,22783358..22783471

Genome Context

<gbrowseImage1> name=IndicaChromosome08:22778948..22783471 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:22778948..22783471 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGTGGCGGGGACGGGGGTGTTCGCGGAGATCCTGGAGGGGGAGGTGTACAGGTACTACGCCGACGGGGAGTGGCGCGTCTCGGCCTCCGGCAAGTCCGTCGCCATCGTCAACCCCACCACCCGCCTCACCCAGTACAGGGTGCAAGCATGCACCCAGGAGGAGGTGAACAAGGTGATGGAGACGGCGAAGGTGGCGCAGAAGGCGTGGGCGCGCACGCCGCTGTGGAAGCGCGCGGAGCTCCTGCACAAGGCGGCCGCCATCCTCAAGGAGCACAAGACCCCGATTGCAGAGTGCCTCGTCAAGGAGATCGCCAAGCCTGCCAAGGACGCGATCTCTGAAGTGGTGAGGTCAGGGGATTTGGTGTCGTACACAGCTGAGGAGGGTGTTCGGATACTGGGGGAAGGCAAGCTGCTGGTGTCTGATAGCTTCCCGGGCAATGAACGGAACAAGTACTGTTTGAGCTCCAAGGTACCTCTTGGAGTAGTTTTGGCAATCCCACCATTTAACTATCCTGTCAACCTAGCAGTCTCCAAGATTGGCCCAGCACTAATTGCTGGCAATGCTCTTGTTCTGAAGCCTCCAACTCAGGGAGCGGTGGCTGCACTACATATGGTGCACTGCTTCCACCTTGCTGGTTTCCCCAAAGGCTTGATCAATTGTGTCACCGGGAAAGGTTCTGAAATTGGTGATTTTCTTACGATGCATCCTGGAGTCAACTGCATAAGTTTTACGGGAGGTGATACCGGTATAGCCATTTCAAAGAAGGCTGGAATGGTCCCGCTTCAGATGGAACTTGGAGGAAAAGATGCTTGTGTTGTGTTAGAGGATGCAGATCTGGATTTAGTGGCAGCAAATATAGTAAAAGGAGGCTTCTCTTACAGTGGCCAGAGGTGCACTGCTGTGAAAGTGGTGCTGATCATGGAATCCGTTGCTGATATCGTGGTAGAGAAGGTGAAGGCCAAGTTGGCAAAACTGACAGTTGGGCCACCTGAGGCTGACTCTGATATCACCCCAGTTGTAACAGAATCCTCAGCAAATTTTATTGAGGGTTTGGTCATGGATGCCAAGGAGAAAGGAGCAACCTTTTGTCAGGAGTACAGGAGAGAAGGCAACCTTATCTGGCCGTTGCTACTGGATCACGTCCGGCCTGACATGAGGATTGCTTGGGAGGAGCCATTTGGCCCTGTCTTGCCTGTGATTAGGATCAACTCGGTCGAGGAAGGCATCCACCATTGCAATGCCAGCAATTTTGGGCTGCAGGGATGTGTATTCACTAAAGATATCAACAAAGCGATCATGATCAGCGATGCGATGGAGACCGGAACCGTTCAGATCAACTCTGCACCGGCTCGAGGACCTGACCATTTCCCCTTCCAGGGCTTGAAGGACAGTGGGATTGGATCCCAGGGGATAACTAACAGCATAAACATGATGACCAAGGTGAAGAGCACTGTCATAAACCTACCATCTCCATCCTACACCATGGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAVAGTGVFAEILEGEVYRYYADGEWRVSASGKSVAIVNPTTRLTQYRVQACTQEEVNKVMETAKVAQKAWARTPLWKRAELLHKAAAILKEHKTPIAECLVKEIAKPAKDAISEVVRSGDLVSYTAEEGVRILGEGKLLVSDSFPGNERNKYCLSSKVPLGVVLAIPPFNYPVNLAVSKIGPALIAGNALVLKPPTQGAVAALHMVHCFHLAGFPKGLINCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMVPLQMELGGKDACVVLEDADLDLVAANIVKGGFSYSGQRCTAVKVVLIMESVADIVVEKVKAKLAKLTVGPPEADSDITPVVTESSANFIEGLVMDAKEKGATFCQEYRREGNLIWPLLLDHVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAIMISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINLPSPSYTMG</aaseq>

Gene Sequence

<dnaseqindica>1..154#622..815#922..1050#2705..2824#2904..3040#3122..3277#3718..4096#4194..4310#4411..4524#ATGGCGGCGGTGGCGGGGACGGGGGTGTTCGCGGAGATCCTGGAGGGGGAGGTGTACAGGTACTACGCCGACGGGGAGTGGCGCGTCTCGGCCTCCGGCAAGTCCGTCGCCATCGTCAACCCCACCACCCGCCTCACCCAGTACAGGGTGCAAGGTGGGTTTCGCTTGCATGCTTGCTGCTCTGAGCTGCTACTACTCTGCTGCTACTGCTGGTGGGATGATTGCCTTCCCGGCTTATAGTTGATCGGCTGGGTGGATATTGGATATGATTGATTGATCGACGATTTGACGGCGACCATCCCTTTCGATATTTACGAAGTTAATTACGGCTAAGTTGATCGGCGCCACTAATTAACTGGAGTAACTGCGTGCGAGCTCGCCTTCTTTAATTCTTATAGCTCCCCTTACCTAATTGGTTTTCCCTTTGGATTCTCAATTGCTCCCTGATTTGGTGACCGGTGAATTTCCCATCTTGTCGGCGCAAGAACATGCCTCGGATTCATCGCCGGCTTCATTCTTGCGGCTGTAATTCGAGTGTTGCTACGAATTGCGAAACGAGTTGACTTTGAACCTGATATCACAATTAGCTGAGAAAATTTGGGGGTCCTTTTGTGTGTCCAGCATGCACCCAGGAGGAGGTGAACAAGGTGATGGAGACGGCGAAGGTGGCGCAGAAGGCGTGGGCGCGCACGCCGCTGTGGAAGCGCGCGGAGCTCCTGCACAAGGCGGCCGCCATCCTCAAGGAGCACAAGACCCCGATTGCAGAGTGCCTCGTCAAGGAGATCGCCAAGCCTGCCAAGGACGCGATCTCTGAAGTCAGTGGCAATTTCAGTTTGTACTTGGTGAATTTTAGTGCCATTCTTCATCTGAAGCGAAGCTAACTGACAAAGATGGCTTGTTGTGTTTTTTGAGTTTTGACAGGTGGTGAGGTCAGGGGATTTGGTGTCGTACACAGCTGAGGAGGGTGTTCGGATACTGGGGGAAGGCAAGCTGCTGGTGTCTGATAGCTTCCCGGGCAATGAACGGAACAAGTACTGTTTGAGCTCCAAGGTATGTGTTGCATTGCTAGATTCAGTCGACTTTCGGTTAAGTTTGTTTGCCATGTTGTTTCTGTCTCTCATTTTGACTAGAAATAGCGATGAAAAAAAAGAAGCTTGTAGTATTTCAGTGTTTGTGTCTGGTGGCTGTTGTTAATTGATCAACGGGCCTTTGTTGACTGGCAGATTGACAAAAAGTTGATGCCTTGGAGGCACCTGTCTAAATCAAGTTTTAATATGTGTTACCTGTATGATAAAATGAGGTTGATATAAATTATGCAGCTAATTGACACGTATAATGGAATATGGTATTATGGAATATTCCTTGGATGCTAGTGGTACTAGTAGCCCATGTCATTCTGGTTTCTTTATCGTCATGAGGTGACCTCTGAAATTAGCACTTCTCCCTGAGTCTAGGATCACTGATCGGGATGGGCATGCAGTGGGACTGCATCTTAAGGGTCAAGATTATCAGTTACAGTAACATTACTACAGTAAACTATGGTACAGTAGAGTCTGCAGTACCTGGATAAATCCACTCGAAGCTGACACATATTCACACTACCGACTGCAGCAAAACCAAATCCCTGAGTCTGTGTCTTTCCCTTGCTGATCTTTCTCCTCTATCTGTCTAGTTTTTGGATATTGAACATAAAAGAAGTGCTTCTGATACTTGTGCTCATTTGGCCAAAGTTAAACAAAATTGGGCAGGTGTCGACGTGACTAGCCATAACTTTGGCAAAATTCGCTGTAATCCAGACCGACCACAGCTCAAACAAGCTTGGAATGAAACCATTCCGTATTTGATACTGTCTTCAACTGGAAATCTAGGATTGCTGGTTACTTGTGAGGCCTGTTTCCACTGGTTTTCAAAATCTGAACTCTCAACTGAATATATTCTTGTATTTTCCAATGATTTGCAGAAGCATAAAAATTAAAATATAGGTTGTGATTCTGTGAACCTTTGATTCTTTGTGATTGGTATACAGTAGTTATCCCCACTTTAGTTTGTTCATTGCTATTTTAGTTGAGTTATAGTAATAGCCCTGTGGTGAACTTGAACTAATCATTGAGTTTGGTGTGTAAGTGTAACTGGTACTTTCTAAATGAACTTCCGTGGCCCATTTTATCGTTGATGTCGTGAAATTAGATACTTCTCATAGAAACAAAGTATTAGATGACAGGAAAACATTCAGCTATGGTTGTTGCTCCTGGGTCCTTTTCAGAGATTGTTAGCATTGTAGTGTGATTAGATCTTTGACCATCTGACTCTGTGCATTAAATTAAACATAGTTTCAAAGTCATTATTCCTTAGTACTAATTATCAATACCTGGATGGTTTTGAGATGTGAATATGCTGCTATATTTCTTCAATAGGATTTTCAGTGATATGGTTTGTTCAAGAAACTAATTTCCAACGATTGTGATTTTCTGATCATCTTTTTTTTTAATCTTTAGAAGATAACGGATTGTTGAAATTGAGTATCATGTACTCTATTGCATGCTCTAGAATGTATGTTCAAGAAAAATTTTCATGAGTCCTAAGATGAATATTATGGTTGATACATTTGACTATCAATGCTCCAGTGAATTTACTTAATATCCTGAAATTGATGATCCATCATTTTGTTTCCTTCGGTATCTAATTCAGTGTCCTATTCATGCAGGTACCTCTTGGAGTAGTTTTGGCAATCCCACCATTTAACTATCCTGTCAACCTAGCAGTCTCCAAGATTGGCCCAGCACTAATTGCTGGCAATGCTCTTGTTCTGAAGCCTCCAACTCAGGTATATATTCTTTTATGTAAAAAGACTTGCCTATGTTTGAAGTAAAACATACTTAAATGGTGTACTACTGTTCAACCAGGGAGCGGTGGCTGCACTACATATGGTGCACTGCTTCCACCTTGCTGGTTTCCCCAAAGGCTTGATCAATTGTGTCACCGGGAAAGGTTCTGAAATTGGTGATTTTCTTACGATGCATCCTGGAGTCAACTGCATAAGGTAATAATCATCCGCTCCTATTTCTGGCATATGCAGATTCAATAAGACACAGACTAAACAGTAAACACTTATGCCATGTAGTTTTACGGGAGGTGATACCGGTATAGCCATTTCAAAGAAGGCTGGAATGGTCCCGCTTCAGATGGAACTTGGAGGAAAAGATGCTTGTGTTGTGTTAGAGGATGCAGATCTGGATTTAGTGGCAGCAAATATAGTAAAAGGAGGCTTCTCTTACAGGTACTAAACAATGAATTTGATTGATCGATCTATGGGTTAGAACAACGTTTATCGTGTTGTTTCATTTGATCTATTAGATATTTGGACATGTCAAAATATGGATACCACAATTCCTTAAAAAAGTGAAATCAGCCACGGGAAATCATAAAAACTTTCAGATAAGTTTTAGCTAACAGAACATGACGTGTGGCATCCAAGTAGTGTCATCATGCATATCAGATAATGTTGCCATATGCTTTTCCTTGCTTCCATCCTTGTACCATACTATATTATTTAAATAGTTCTATACACCCATATTTCATCTTTATGTGCCATTTTCTTTTGCTTTTCTATTATTTTCCATGCTTGGCCCTAGTAACTATGCGAGGACAGAAGTCTTAACTGAATTTGCATCAAATCATACTCTGGATTTCTACTGACATTTCTTATGATCAACGTAGTGGCCAGAGGTGCACTGCTGTGAAAGTGGTGCTGATCATGGAATCCGTTGCTGATATCGTGGTAGAGAAGGTGAAGGCCAAGTTGGCAAAACTGACAGTTGGGCCACCTGAGGCTGACTCTGATATCACCCCAGTTGTAACAGAATCCTCAGCAAATTTTATTGAGGGTTTGGTCATGGATGCCAAGGAGAAAGGAGCAACCTTTTGTCAGGAGTACAGGAGAGAAGGCAACCTTATCTGGCCGTTGCTACTGGATCACGTCCGGCCTGACATGAGGATTGCTTGGGAGGAGCCATTTGGCCCTGTCTTGCCTGTGATTAGGATCAACTCGGTCGAGGAAGGCATCCACCATTGCAATGCCAGCAATTTTGGGCTGCAGGTGCACACTCACATACATGATTGAAATGGACATTGATGTTTGTTACAACATGAATATCATTGTGCATCTGATTCATCTATGCATTCTTCCATTTCAGGGATGTGTATTCACTAAAGATATCAACAAAGCGATCATGATCAGCGATGCGATGGAGACCGGAACCGTTCAGATCAACTCTGCACCGGCTCGAGGACCTGACCATTTCCCCTTCCAGGTATTGTTACCATGCCATTGACTCGGCTTGCCATCATTTTGTTCAATTTACCTTTTGCTTTCTTCAGTTGTTTGTAATTTCTATGGGGTTTGGACTACAGGGCTTGAAGGACAGTGGGATTGGATCCCAGGGGATAACTAACAGCATAAACATGATGACCAAGGTGAAGAGCACTGTCATAAACCTACCATCTCCATCCTACACCATGGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028743