BGIOSGA028786

From RiceWiki
Revision as of 08:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028786| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028786, complete gene.| tag = B1144B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028786

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028786, complete gene.

LocusTag

B1144B06.13

Ensembl Transcript ID

BGIOSGA028786-TA

Ensembl Protein ID

BGIOSGA028786-PA

Length

1117

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23723978..23725094

Sequence Coding Region

23723978..23724167,23724252..23724811,23724921..23725094

Genome Context

<gbrowseImage1> name=IndicaChromosome08:23723978..23725094 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:23723978..23725094 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGACGGGAACGCGGTGGACGAGCTGATACGGCGGCTGCTCGACGGGAAGAAGGTCAAGCCGTCGTCGTCGGCGAAGAAGGTGCAGCTCAGCGAGGCGGAGATCCGGCAGCTCTGCGTCACCGGCAAGGACATCTTCCTCTCCCAGCCCAACCTCCTCGAGCTCGAGGCCCCCATCAACGTCTGCGGCGACATCCACGGCCAATTCTCCGACCTGCTCCGGCTGTTCGAGTTCGGCGGGCTGCCGCCGACGGCGAACTACCTGTTCCTCGGCGACTACGTGGACCGCGGGAAGCAGAGCATCGAGACGATCTGCCTCCTGCTGGCATACAAGATCAAGTACCCGGACAACTTCTTCCTGCTGCGAGGCAACCACGAGTGCGCGTCGATCAACCGAATCTACGGGTTCTACGACGAGTGCAAGCGCCGGTTCAGCGTCCGCCTCTGGAAGCTCTTCACCGACTGCTTCAACTGCCTCCCCGTCGCCGCCGTCATCGACGACAAGATCCTCTGCATGCACGGCGGCCTCTCGCCGGACCTCGACAGCCTCGACCGGATCAGGGAGATCGCCCGACCCGTCGACGTCCCCGACCAGGGCCTCCTCTGCGACCTCCTCTGGTCCGACCCCGACCGCGAGAGCTCCGGCTGGGGCGAGAACGACCGCGGCGTCTCCTTCACCTTCGGCGCCGACAAGGTCACCGAGTTCCTCAACAAGCACGACCTCGACCTCATCTGCCGCGCTCACCAGGTGGTGGAGGACGGCTACGAGTTCTTCGCGGACAGGCAGCTGGTGACCATATTCTCGGCGCCGAACTACTGCGGCGAGTTCAACAACGCCGGCGCGCTGATGAACGTGGACGCCAGCCTGCTCTGCTCGTTCCAGATCCTCAAGCCGTTCAGAGGCAAGTCGCAGGCGGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MMDGNAVDELIRRLLDGKKVKPSSSAKKVQLSEAEIRQLCVTGKDIFLSQPNLLELEAPINVCGDIHGQFSDLLRLFEFGGLPPTANYLFLGDYVDRGKQSIETICLLLAYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKLFTDCFNCLPVAAVIDDKILCMHGGLSPDLDSLDRIREIARPVDVPDQGLLCDLLWSDPDRESSGWGENDRGVSFTFGADKVTEFLNKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFNNAGALMNVDASLLCSFQILKPFRGKSQAE</aaseq>

Gene Sequence

<dnaseqindica>1..190#275..834#944..1117#ATGATGGACGGGAACGCGGTGGACGAGCTGATACGGCGGCTGCTCGACGGGAAGAAGGTCAAGCCGTCGTCGTCGGCGAAGAAGGTGCAGCTCAGCGAGGCGGAGATCCGGCAGCTCTGCGTCACCGGCAAGGACATCTTCCTCTCCCAGCCCAACCTCCTCGAGCTCGAGGCCCCCATCAACGTCTGCGGTGATGATCTAGCACGCCATTGTTTCCGTTTCTTGAATTCTTTCATCGATCCGTAACAAATTATATTCTGCATTGCATACGCAGGCGACATCCACGGCCAATTCTCCGACCTGCTCCGGCTGTTCGAGTTCGGCGGGCTGCCGCCGACGGCGAACTACCTGTTCCTCGGCGACTACGTGGACCGCGGGAAGCAGAGCATCGAGACGATCTGCCTCCTGCTGGCATACAAGATCAAGTACCCGGACAACTTCTTCCTGCTGCGAGGCAACCACGAGTGCGCGTCGATCAACCGAATCTACGGGTTCTACGACGAGTGCAAGCGCCGGTTCAGCGTCCGCCTCTGGAAGCTCTTCACCGACTGCTTCAACTGCCTCCCCGTCGCCGCCGTCATCGACGACAAGATCCTCTGCATGCACGGCGGCCTCTCGCCGGACCTCGACAGCCTCGACCGGATCAGGGAGATCGCCCGACCCGTCGACGTCCCCGACCAGGGCCTCCTCTGCGACCTCCTCTGGTCCGACCCCGACCGCGAGAGCTCCGGCTGGGGCGAGAACGACCGCGGCGTCTCCTTCACCTTCGGCGCCGACAAGGTCACCGAGTTCCTCAACAAGCACGACCTCGACCTCATCTGCCGCGCTCACCAGGCAAGCCGCCATCGCCATCGCCACCTCCTCCTCCCGTGCGTTGCGATTTTGCATAATCGTCTCAACCTTGAAGCTCTTCTTGCGTTCTTGGGGGCAAATGGACGAACAGGTGGTGGAGGACGGCTACGAGTTCTTCGCGGACAGGCAGCTGGTGACCATATTCTCGGCGCCGAACTACTGCGGCGAGTTCAACAACGCCGGCGCGCTGATGAACGTGGACGCCAGCCTGCTCTGCTCGTTCCAGATCCTCAAGCCGTTCAGAGGCAAGTCGCAGGCGGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028786