BGIOSGA028849

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Revision as of 08:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028849| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028849, complete gene.| tag = P0451G1...")
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Gene Name

BGIOSGA028849

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028849, complete gene.

LocusTag

P0451G12.30

Ensembl Transcript ID

BGIOSGA028849-TA

Ensembl Protein ID

BGIOSGA028849-PA

Length

6079

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25027424..25033502

Sequence Coding Region

25027424..25027504,25028094..25028219,25028332..25028448,25028575..25028970,25029045..25029397
,25029526..25029646,25030089..25030148,25030676..25030759,25032313..25032438
,25033200..25033502

Genome Context

<gbrowseImage1> name=IndicaChromosome08:25027424..25033502 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:25027424..25033502 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGTGGCAGCGTGGGGAGGAGGAGGTCACCGGCGGCGGTGCGGCACGGCGGCGTGAGGGCTCCTCCGAGGAGCGACAAGGTGATGGAGAGGCCCAACTCGAAGATTCCGGCGATGAAGGCGTCGTCCTCCAATGCTGCGGCGCCCCAGATGATCATGAACAGGAGCCAATCCAGGAGAGACAGGAAGATTGCACTGCAGCAAGACGTGGACAAGCTGAGGAAGAAGCTGCGGCACGAGGAGAACGTCCACCGAGCTCTGGAGCGCGCCTTCACGAGGCCACTCGGCGCTCTCCCTCGCCTTCCACCTTACCTGCCTTCTCAGACGCTGGAGCTCCTCGCCGAGGTCGCGGTCTTGGAGGAGGAGGTCGTCCGGCTCGAGGAGCAGGTCGTCAGCTTCCGGCAAGGGCTCTACGAGGAGGCTGTCACCATCTCCATGGCGAAGAGCGCGTACTTCTCCGACACCGACCGGTGCACGCCGGCGCGCCATGGCCAAGTTCCCGACCAAGCTGCTAGTGCTAGCTGGTCGTCTCTGAAGCGAGTCACCAATGTCAAGCAGACGCCAAGAAGGACTATTCCTTCCATGAACCATGGAGGTGATCGTCCTGGGAAGGAGAACCAATCGTGTACCACCAACTCTTTCAGAGATCACAGCCGGTTCCCTCTGAAAACCGTGCCAAAATGCAGTAATCCAGAAGAGGAGAAATGTGCCGATTTTCAGACAGTTAGTGCAGTGAAAGATCAGAAAGGTACTGAGGACACCACTGTCATTGATTCAGAAAACATCTCGACAGAAGCAAACAAAGTGTCTGAGGAGCTATTGACGTGCCTACTGAATATCTTCTCACAGATGAGGTCCTCCAGTGACCAAGATGAGGACCGATCATCGTCTCCGTCGGTTTCAGGCTCCTGCGAGAGCTCCGACGGCGCCGCCTGCGCCGGCGACCCCTACGGCGTCCTGGAATTGGGTAGCAGGGACATTGGTCCATACAAGCAATTCAGAGCAGTTGATGCCACTTCATTCGATCAGAATGTTTTTGACAGCAGCAACTCCCTTCTTGGCAGGAGATTGAATGTCTACCTGGCAAAAATCAGGGCCTTGCTCCAGAAGCTCTCTTCAGTTGACCTAGTGGGCCTTTCCCATCAGCAGAAGTTAGCATTCTGGATCAACACCTACAATTCCTGCATGATGAATGCATTTCTTGAGCATGGAGCACCTACCACCCCACAAACGCTGGTGGCAATGATGCCCAAGGCGACAATCAACGTGGGTGGGCGCGTGCTGAGCGCCATGACGATCGAGCACTTCATCCTAAGGCTGCCCTACAATGCAAAGCATGTGAACCCGAAGGGGGTGAAATCCGGCAATGGCGCGGGGGCGGCGGCGAGAGGGGTTTTTGGACTGGATTGGCCTGAGCCGTCGGTGACGTTCGCGCTGTCCTGCGGAAGCTGGTCTTCGCCGGCGGTGAGGGTGTACACGGCTTGCCACGTCGAGGAAGAGCTGGAGGCAGCCAAGAGGGACTACCTGCAGGCCGCCGTCGGCGTCTCGACGGCGACCAGCATCTCGATCCCCAAGCTCCTGCACTGGTACCTTCTTGACTTCACCAAGGACGTGAGCTCCCTCATGGACTGGGTGTGCCTGCAGCTGCCCGGCGAGCGGCGGCGGCACGCCGTCGAGGCCGTCGAGGCCAGCCGCCGGAGCCCGTCGCCGCCGCCTATCCAGGTTGTGCCGTACGAGTTCAGGTTCAGGTATCTTCTGGCCACGTAG</cdnaseq>

Protein Sequence

<aaseq>MSGSVGRRRSPAAVRHGGVRAPPRSDKVMERPNSKIPAMKASSSNAAAPQMIMNRSQSRRDRKIALQQDVDKLRKKLRHEENVHRALERAFTRPLGALPRLPPYLPSQTLELLAEVAVLEEEVVRLEEQVVSFRQGLYEEAVTISMAKSAYFSDTDRCTPARHGQVPDQAASASWSSLKRVTNVKQTPRRTIPSMNHGGDRPGKENQSCTTNSFRDHSRFPLKTVPKCSNPEEEKCADFQTVSAVKDQKGTEDTTVIDSENISTEANKVSEELLTCLLNIFSQMRSSSDQDEDRSSSPSVSGSCESSDGAACAGDPYGVLELGSRDIGPYKQFRAVDATSFDQNVFDSSNSLLGRRLNVYLAKIRALLQKLSSVDLVGLSHQQKLAFWINTYNSCMMNAFLEHGAPTTPQTLVAMMPKATINVGGRVLSAMTIEHFILRLPYNAKHVNPKGVKSGNGAGAAARGVFGLDWPEPSVTFALSCGSWSSPAVRVYTACHVEEELEAAKRDYLQAAVGVSTATSISIPKLLHWYLLDFTKDVSSLMDWVCLQLPGERRRHAVEAVEASRRSPSPPPIQVVPYEFRFRYLLAT</aaseq>

Gene Sequence

<dnaseqindica>1..81#671..796#909..1025#1152..1547#1622..1974#2103..2223#2666..2725#3253..3336#4890..5015#5777..6079#ATGAGTGGCAGCGTGGGGAGGAGGAGGTCACCGGCGGCGGTGCGGCACGGCGGCGTGAGGGCTCCTCCGAGGAGCGACAAGGTACGTGGCTCTCCCCTTGCATTCCTTCCCCCCACTCCACTCCCTTTCTTGGGCTCCGGCCGCCGGAAAGTTTGCGCTAATGATGATATTCCTCGCGTTTTTTTGTGTTGTTTCCAATACGTTTTCTTTTTTTCTTTTTGTGTGTGTCTATTGCCGTCCTTGACTCTTGCGTGCTCCTCGGATCGCAACAAAGCTGCCGCCTTTCGCGTCCCATGGGAGATGGGCGCATGAATTCTTTGCGTTTCGAGGCCTTTTGGGGGTGTCTTCGGGAGACGAGTTCTGCGCTCCTTTTTTTCTTTTTTTGTGTTCTTGGAGGGAGCGGTTGATTGCTACGGCTTCAAAGCTCAGCAGAGCTTTCTGTGTTTAACAAGTTTTGTACACCTCACTCCTGTTGCTTTCGCGTGCCAATTCGGATGGTTTTCGCTCTGAGTTTTTGAAATGGGCTCCGGGGGATCCATTCCAGTCGAGAGCAGTTCAAATTCGGTATCTTGATTGCTCCCCGCTCCTGCAGCCCCGCGTTGTATTTAATTCACTGTCGCTTGTTGCATCTAAACGAGTCCATTTTGTTTTCTTCTCCGCCCTGATCAAGGTGATGGAGAGGCCCAACTCGAAGATTCCGGCGATGAAGGCGTCGTCCTCCAATGCTGCGGCGCCCCAGATGATCATGAACAGGAGCCAATCCAGGAGAGACAGGAAGATTGCACTGCAGCAAGACGTACATTATCTTTTCTCCTTGCCTAGAAATTCAGTTTTTGATCGAATTGATCAGCTAAAACACAATCAGTTAGTAGCATGTTCGAACGCTTTGCCTTCTTGTTGGGTTGCAGGTGGACAAGCTGAGGAAGAAGCTGCGGCACGAGGAGAACGTCCACCGAGCTCTGGAGCGCGCCTTCACGAGGCCACTCGGCGCTCTCCCTCGCCTTCCACCTTACCTGCCTTCTCAGGTAACATCCAGCTCCGGCCGCCGGCCGCCGCCATCGCCATGGCTGCAGCTTAGCTCCAGCTTGTGAGACGGATCGGATTTCATCTCCCTGATCATTTTGTTTTTTTGCCGAATTGTGCAAATCAAGACGCTGGAGCTCCTCGCCGAGGTCGCGGTCTTGGAGGAGGAGGTCGTCCGGCTCGAGGAGCAGGTCGTCAGCTTCCGGCAAGGGCTCTACGAGGAGGCTGTCACCATCTCCATGGCGAAGAGCGCGTACTTCTCCGACACCGACCGGTGCACGCCGGCGCGCCATGGCCAAGTTCCCGACCAAGCTGCTAGTGCTAGCTGGTCGTCTCTGAAGCGAGTCACCAATGTCAAGCAGACGCCAAGAAGGACTATTCCTTCCATGAACCATGGAGGTGATCGTCCTGGGAAGGAGAACCAATCGTGTACCACCAACTCTTTCAGAGATCACAGCCGGTTCCCTCTGAAAACCGTGCCAAAATGCAGTAATCCAGAAGAGGAGAAATGTGCCGATTTTCAGGTACAAGACTTAGCCCAATGTTTTGTTTTTGTGTGCTTAAATTTATTTTGCTCGCTAATGTTGTTTCGTTTCAGACAGTTAGTGCAGTGAAAGATCAGAAAGGTACTGAGGACACCACTGTCATTGATTCAGAAAACATCTCGACAGAAGCAAACAAAGTGTCTGAGGAGCTATTGACGTGCCTACTGAATATCTTCTCACAGATGAGGTCCTCCAGTGACCAAGATGAGGACCGATCATCGTCTCCGTCGGTTTCAGGCTCCTGCGAGAGCTCCGACGGCGCCGCCTGCGCCGGCGACCCCTACGGCGTCCTGGAATTGGGTAGCAGGGACATTGGTCCATACAAGCAATTCAGAGCAGTTGATGCCACTTCATTCGATCAGAATGTTTTTGACAGCAGCAACTCCCTTCTTGGCAGGAGATTGAAGTGAGTTTCCACTGATCTGGGGTAACTACTACTGCTACTGTACTAATCTGTCATTACAAACTAGATTCTGCTGTGTGATGAGTTGGTTTCTGTTTGACCTATCATGTTCATGGAATGATCTTGTCTAGTGTCTACCTGGCAAAAATCAGGGCCTTGCTCCAGAAGCTCTCTTCAGTTGACCTAGTGGGCCTTTCCCATCAGCAGAAGTTAGCATTCTGGATCAACACCTACAATTCCTGCATGATGAATGTAAGCTGTCCCTCATAATTGAGGCCTCCTTTGCTTTTCCCCTCAGCATGATTGATTGACAACTTTGATTAGCTCCCTTTTACACTGATGTGAAATCTCCAACGGTTGTAAGCTTGTTTAGGTTTGCTTAAATACACCTAAATAGTTCTGGCCATGTGTAATTTTCTGCGCCTTGTTTTAAATAATTGGACAAGAAAGCATACACGGCATGTCTGTGGACTGCATGTTGTCATGTTATTAAACGTTTAAACCTCAGTATCAAAATGCTTCCTGCTTCCTTGATCATCTGCAGAGCCATAAACAACTGACGACCTTGGCTCCATTATCCTTTGACCCACAGCTCGTCTTCGCTAGCAAAGCCTGACAGAATTCATTAATCTGATCAAAGTGACATGTCTCCTGATCTAACACTAATGCAGGCTTGTTTATTCTGCAACTCCAGGCATTTCTTGAGCATGGAGCACCTACCACCCCACAAACGCTGGTGGCAATGATGCCCAAGGTTCCATCCATCCATCCATCCACATTTACTTCTTTCTCTAGATTCATTACGTGCAGCATATGCATCTGCAACTCGAGAGCAAAAGATAAAAGGGTGATATGGAGAAAATCTCTGACAAGAGTGAGTTGGTTGTTTTTCTTGGCAACATATCCTATGCACACAGGCCCTCACGTGTACACACGTGTACACCAACTAAAAAATGTCACCAAAAAATCTAGAAAAAATCATACCATTACACCTAGGGTTAAAATCTTAACGTCAAATTCATTATATTTTAGCCGTAACAAAAAAAACAAAAAATCTGACAGTTTTAAGGTTGTAATTTTGTCAGAATTTTATCTTTTTTGTTATTCTCTATGTAGAATGAATTTGAAGATGCGACTTTGCACGTAGATGTAATACTATTGAAAGTACATGTATGAATTTTCCTAGAATTTTTTGTGATAATTTTTAGTTGGTGTACGCGGTGTGTACACGCGAGGGCCTGTGTGCATAGGATACGCTCCCGTTTTTCTTTGCTGCCGCAGGCGACAATCAACGTGGGTGGGCGCGTGCTGAGCGCCATGACGATCGAGCACTTCATCCTAAGGCTGCCCTACAATGCAAAGCATGTAAGAGTAAGATGCTAGCATCATTGCCGTGTGCCTGAAAACTTATCTGATCGATTTCATGGTACAAAAGATTGACGCCCCATCGTTCGGGCGTATTTGCAAAAAGAAAAATAATTTGTGAATAAAAAAATCGTATACATGTTCTTAGCGATTTAAAATTAAAAGCTGAAAAATAAACTTCGATGAAAAAAACCTCAAAATCAACTCTAAATTTAAGGTTGAAAATTTAAATTTTAGCTGATAAGCGTAAACATAAGCGAAGATATATATTTTTAGATAATGGATTTTCATTAATCCGGCCTCTATATCCACAAGGGATATACACAGCCAAAAGGATACAAGAGTACTAGACTCACACCTCAACGAAGAGGAGAACACAAAACCAAAAAGCAAGAAAACCTACAACCTCGGTAAATCCCTGCATCCTGACATCCTCAACTGAAACGGCCAAAATCGACAAGTGGAAATCATCTAGTCGCCACCGCCCCTAGTGCGTTGTCGCTGCGAATCTCCATAGATATCATTTTCATCCGCTTCAAGTGAACCAATGCCACGGCAGCCGGAAAGCCCACCCTCATCCATCGTCCTCCGGTCAGAACTAACCGACCAGACACTAGTTGAAAGCAACTGTGTTTGCTTCGTCGGATTCTTAAGCCTCCGCAGCCCATAGGGCCGCCATTGACTTCAGAATCCTACTCCGTTCTCGGACTCCCAGCCCGCTGCCACCTTTGCGCCGCTGTCGCCGACCAAGTCTGCCGCTGACGAAGGAGGGGATAGAGGACTAGCTCCATCTCCATCCAGAACAGCTACTCACCAAGTCCGCGACGCCGTCGGTGACAAAGGAAGGAACGGTGGGCTAGCCCCTGTCACCACCGCCCATTGAGACTACCGGTGATGGAGAACTTGCCGCCACACAGCAACCATGCCCATCACCGGAGCGCCCCACTAACCGGCAACCTCCACCACTGCCACCACCCCCGGCCAACCGGCGCCATAGGCGCCTGCCTTGCCGACTGCCACTGGGCGTGGCCGCTCCCGCCGTCGACATCACCTCCACTGCGTCGCTCGCCGGAGCCAGGCGAGACCCACCGTGCCGCCCTCTCTCTAGGAAGGGGACTGAGGAGGAAGCCTTGCCGCCAACCCAGCGGACCTGCACTCTCCGGTGACCTGCTCGAACGGTGGCAAGTTGAAAAGCGACGACGGCGGTGAGGATTTACAGGACCGGGCAACTAGCCAGCAGCCTAGGACTGGATCTGAGCAGAAAAGGTGGAAAAGGGAGAAATGGGAAAGGGAAAAAGGTGAAAGGGGGAGGTGAAAAGGGAGGAGGTGGGTGGGGGCGCCGCCGGCGGCTGCGGCGCCGGCGCCGGCGCCGGCGAGGTGGGCGACGAGGGGAAAAGCGCTGGGAGTCCTGTTCTCCTCCCGGGTCGCCTCAGAGAGCGACACGGGAGTCAAAGCGTCCCCACAATTTCCGTATAATATGACGGGATAACAGGAATCTTGATAAGCGAAGAGATGAGGAGGATATAAGATGATGTTTATGCCTTTGTGGACAGGTGAACCCGAAGGGGGTGAAATCCGGCAATGGCGCGGGGGCGGCGGCGAGAGGGGTTTTTGGACTGGATTGGCCTGAGCCGTCGGTGACGTTCGCGCTGTCCTGCGGAAGCTGGTCTTCGCCGGCGGTAAGTTTCTCCGGCGTGCCGGTGAATTTTCTCTCTGCTCTCGGTGTGCATTCTGCATGTGCTAGCTAACTTCAGATTGAAAAAAGGAACAAAAGTTAACGTGTATGGTACTATGGTGTGTATCTTTTCAACTGCTACATCATAAATTTGCCGGGAAGCTCTGTGTGGCAGCTAGCCAGCCAGCACTCTAGCAGCCTGCGATTATAACAAGCTGCAAAGGCAAAAGTTGAACAAGCTGCACTTTACTAATTGTACTGAAAAGTACAGTAGGAATATTTGTTAGGGCACAAATATAAGTCGTTTGGTGTAATCAAGTTGGTTGCAGACTTGCAGTCTAGGGAAGAGTACTGAATACTACTAATGTGTGAGAATTCAGCATAATATAAAGCTATCACTATTAGGCAGTAAAAATGCAGACCACTACAATGTGAGCAGGGTTTACTATTTCAGACTGCATAAACATTTAGGTGGTTTCGGAAATTTAAACAGATTTTGTTAAATTGATTTCCTTTTTTCTTTTTTGCAAAATTCAGTAAAACTTGTTTTGTTTTCGGAAATTTCAAAATGTTAGTACTGAAATTGTGAGACTGAATATGATACTGAACTCCTCACTGCACTGGAAATGTTGATTTTATTAAGAGAAGTGTATTCCAGTATTGATTTTTTTAGAGAATGGTATTTTTTACACGGCCACCACTAGGCTATATTTCCTTTGGTATTGGAAATGCTGATGACATAGGAGTATTTTTCTCTCTACGCAGGTGAGGGTGTACACGGCTTGCCACGTCGAGGAAGAGCTGGAGGCAGCCAAGAGGGACTACCTGCAGGCCGCCGTCGGCGTCTCGACGGCGACCAGCATCTCGATCCCCAAGCTCCTGCACTGGTACCTTCTTGACTTCACCAAGGACGTGAGCTCCCTCATGGACTGGGTGTGCCTGCAGCTGCCCGGCGAGCGGCGGCGGCACGCCGTCGAGGCCGTCGAGGCCAGCCGCCGGAGCCCGTCGCCGCCGCCTATCCAGGTTGTGCCGTACGAGTTCAGGTTCAGGTATCTTCTGGCCACGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028849