BGIOSGA028850

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Revision as of 08:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028850| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028850, complete gene.| tag = OJ1111_...")
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Gene Name

BGIOSGA028850

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028850, complete gene.

LocusTag

OJ1111_E05.12

Ensembl Transcript ID

BGIOSGA028850-TA

Ensembl Protein ID

BGIOSGA028850-PA

Length

3757

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25041047..25044803

Sequence Coding Region

25041047..25041185,25041275..25041555,25041623..25041716,25041820..25041931,25044656..25044803

Genome Context

<gbrowseImage1> name=IndicaChromosome08:25041047..25044803 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:25041047..25044803 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGAGGTCAGTGTCCGGGTCCAACTCGTCGAGGGGCATCGCCGCCGTGGTCGGCGTCGGCCCCAGGCTCGGCTCCGCCGTGGCTCGCAAGTTCGCCTCCGAGGGCTACACCGTCGCCATCCTCTCCCGCGACCTCGAGAAGCTGTCGCAGCTGGCGGAGGAGATCGCGCAGGAGGCGAAGGCGCAGGTGTTCGCGCTGCGGGTGGACTGCGCCGACGCGCGGTCCGTGCGCGAGGCCTTCGAAGGGGTGCTCTCGCTCGGCCCCGTCGAGGTGCTCGTCTACAACGCCTGCGAGCCACCCGCCGACGGCGACGGCGACGCCTCCCCGCGCCCGACTCCCTTCCTCGCCATCTCCCCCGACGCCTTCCACCGCGCCCTCGCCGTCTCCGCCGCCGGCGCCTTCTACTGCGCCCACCAAGTTATACCGGGGATGGTCGAGCGGGGCAGGGGCACCGTCATCTTCACCGGCTCGTCGGCGTCGGTCACCGGCTACGCCGGCTACTCCGATCTAAGCTGCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGGCCAAGGAGTTCCAGCCGGCCGGCGTCCACATTGCTCACATGATCATCGACGGCGTCATCGGCGAACCCAGGTCAGGGAGGGGGAGGTGCGGCGGCGAGACGGCGTCGTCGGCGGGGGCGGACCCGGACGCGGTGGCGCAGAGCTACTGGCACGTCCACGCGCAGGACAGGAGCGCGTGGACGCAGGAGATGGACATCCGGTCGCCGTCGCTCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MLRSVSGSNSSRGIAAVVGVGPRLGSAVARKFASEGYTVAILSRDLEKLSQLAEEIAQEAKAQVFALRVDCADARSVREAFEGVLSLGPVEVLVYNACEPPADGDGDASPRPTPFLAISPDAFHRALAVSAAGAFYCAHQVIPGMVERGRGTVIFTGSSASVTGYAGYSDLSCGKFALRGLSQSLAKEFQPAGVHIAHMIIDGVIGEPRSGRGRCGGETASSAGADPDAVAQSYWHVHAQDRSAWTQEMDIRSPSLM</aaseq>

Gene Sequence

<dnaseqindica>1..139#229..509#577..670#774..885#3610..3757#ATGCTGAGGTCAGTGTCCGGGTCCAACTCGTCGAGGGGCATCGCCGCCGTGGTCGGCGTCGGCCCCAGGCTCGGCTCCGCCGTGGCTCGCAAGTTCGCCTCCGAGGGCTACACCGTCGCCATCCTCTCCCGCGACCTCGGCAAGCTCGATCTCCCTCTTCTTCTTCCTCCTCCTCCGTTCTTGCATGATGGCCGGTGATGGTGGATGTGGTTGTGTACGTTGGTGCAGAGAAGCTGTCGCAGCTGGCGGAGGAGATCGCGCAGGAGGCGAAGGCGCAGGTGTTCGCGCTGCGGGTGGACTGCGCCGACGCGCGGTCCGTGCGCGAGGCCTTCGAAGGGGTGCTCTCGCTCGGCCCCGTCGAGGTGCTCGTCTACAACGCCTGCGAGCCACCCGCCGACGGCGACGGCGACGCCTCCCCGCGCCCGACTCCCTTCCTCGCCATCTCCCCCGACGCCTTCCACCGCGCCCTCGCCGTCTCCGCCGCCGGCGCCTTCTACTGCGCCCACCAAGTACAATCCATCAATCCACATCTCTCCTCTCGATCATATCTTTGCCGGCCACTGATCGATCAAACAGGTTATACCGGGGATGGTCGAGCGGGGCAGGGGCACCGTCATCTTCACCGGCTCGTCGGCGTCGGTCACCGGCTACGCCGGCTACTCCGATCTAAGTAAGCTGATCCATTCACTGGCTCGATCGATCACACGTAATTAAGCAACCGGATTAAATTCCTGGATCCGAGTCATGTTTGCGCGCGAGTAAAATGCATGCAGGCTGCGGCAAGTTCGCGCTGAGAGGGCTGTCCCAGTCGCTGGCCAAGGAGTTCCAGCCGGCCGGCGTCCACATTGCTCACATGATCATCGACGGCGTCATCGGCGAACCCAGGTCAGCGAACCAAACCAACTCATGATCTCAATTTCACTAACCAATACTTCAAGAAATCAAGATTACGGACGTCTTTGCTTGCTAGATACTAATATAATTATAAAGCATAAATGCATAAGCTTATTATAGCTTTGATTCATTACGGGTAGTCAAATTGCGGGTAATTAGTTTGGGCAAGTGCGAGTGGAATATTGTCCCTAGTGAGCTATGACAAGAAGAAGATATACCAAAGTTTCGGGAGATCTCTCAATCCTATCGTTCGGTACCTCGCGAAGGTCGGTGGTCCTGTGGCGTCGTCGCGAACGTGTAGATCAGATCAGCTCATAGGGCATTTTCAGGAAAGGGGAACAGAGGAGAAAAAAAATAAAATTTTGCGTCCCTCTCATAAATATGCAGGAATACATTCCGCAATGATGGCACGGATATATACGACTTCTGTAATACCGGCCACTGAAAAACATGTGCGAGCTGCTTCTTTCGGCATCATTCCTTGAACCCTAGAAAGAAGATAGTTCAGTCGTTCGGTCAATGCGTATATTTTATAATAGATAGTATCGAAATAATTTGTTAATATATATTTTAGAAAATTGACTTGAACAAGTACGTAAGCATACCGATATTTTGTTAAAACCGTAAGTATGCGTACCGATATATATGCCCTCATCGGGAATATGCAAAGCGATGGTATATGATAGCTATATATCCTCCTGATCAACCAACGAGACCACTTGTACAACATATCATATATATGATTTGTTGCATTGTATTGTGTTGGATTTTTTTCTTAAATAGTTATATCTATCTATCTACTTTTCAGAGGCATAAAAAAGAGTCAACATATTCTCTCTGCACGTTTGGTTGTCTAGATTTTTCCACATTAATTGAAAAAAAAAGAAAAAGATTTGCATCAATTGATCATGGAGGGTCTAAATATAAAAATATTTGCATATTAGACCATAATGAGATTAGATTATAATGGTATAGCTTGGTTCGCTTTTAAAACTAGCCCGTGTAGAATTTCAGGGGGAAAAAATCAATAAGAACTTAAAAGTTTCCCCACATTCCAGATGAACTTTAGACCTTTAGTATATTGCCTTTGTTCTTTTCGAAAACTCTATCACTTACAAGAATAACAACTTTTATTCATGCTCAAAGACATTTACAATAGGAAGTGGTCTCATGGTATGCTCTTGGGAGGTGCAGCAGCTTAAGCAAGTATTAGTGATACTATACTTGGACAATGCATTGGAACTTAAATGGATGTAACCGTAATTTTACACTTTTATGCCTTGTTCCTTTTCACTACAGCCTATAATCTTTTATATTTACTTTCTAAAGTGAACTATCCCATACAAACACTATCAACATAAAACAGTTTATAAATATGCTCCTACCCTACCTGTCAGCCACTCGTCCATCATTTCAGCTTCCCACACTCCCATCTCTCTCCCCCCGCCAATTTCTTTGATCTTCCTCCATTCCATACCGACACAACAATATACATCTTTCTCGATGCCAGCACTAACAACACGAGCCTAGCAGAAAGCCACCTTAATGAGGGATCGATCAGCCTCCTACCTCTCTATATTGAAACCTTAATTTGGGATTTGTCAACTACCCAATGCCTCTTCCCTCTCTCTTTCCCATCTGTAGTTGCAACTGTGTACTCCGCTCTATTTTGTAACGGACAGGATCCCCTTCTCTCCATGAACCCAAGCCTCAACTTCATCTGGAGAAGCCATAGCGAAGTATGGTGAAACTGATCTAGATCCAGTATCGTCACAAAAATAGCAGCTAAAAACATTGGTATTATGGATCAACGCCATGAAAACAACCTCCCTCTCCCTTTGTCCACAGCGAGCTACAACAATTATTTTTCCAAGAAAAATAGTACAAACACAAGCACCAACATATACACGCGTACACTCATCGCTATAAACACTCTAGAAGTATATATGTCCGAGAGACTGAGCTAGCACTTCCATAATTTAGTGATAAGCTATTCTTTATGATTCTTTTTCAGGCTTTTTCTTTTCTTTGCAGCAACATGCATGCATCAGACAACATTTCTTTTCAGTTCTCGTGTTTATTCCGTACCATGATCTCGCTTCACTGCACAAAATATTTCCATGCCCTACGAGAGCAGGACACGGCGACACCATTTCAAACCCATCGCTATGCTGAGTTGTAAATGCTCTTGTCTACTGTCCGATCCAACGCCTCCCTTCCATTCATGGCATCTCCAAAAAAAAAAAAAGCAACAAAATATATTCTCTTTCTAGAGTCATAGTCCGATCCGACCTGTTCGATCTCGGAAACTTTTTAAATTACTACTTTTGGATCATAAATCGGGTTGGATAGTTGGGCACCTGGCCCAACCACCAACTGCCACCTTATGCTGCTTCTCCCCTCGGCTCGACACGTTACGCGCGGTCCAACGTTTTCGCCCGGAAAAAAAAAGCTCTCATGCCGTCCTCGTGACCTGCCGCGGCGCCGGCTGCCGACACCGCACGCATCGGCGAGCGAATCGCTCGCTCGATCGCGCGCACGCCGCGTGCGCCACGCTTTTTCGCGCTCGCGCTCCGGCGCTCGGCGAGCGCGCACCGAGACCACGACCATCGCGGCTAGCTTTTTTTTACAGTGTGGGTGGGTTAATCGCGGGGCGCGATCGAGTGATGATGGAAGCGTACGTGATGTTTTCGTGTGTGTTTTTGTTGCACGCAGGTCAGGGAGGGGGAGGTGCGGCGGCGAGACGGCGTCGTCGGCGGGGGCGGACCCGGACGCGGTGGCGCAGAGCTACTGGCACGTCCACGCGCAGGACAGGAGCGCGTGGACGCAGGAGATGGACATCCGGTCGCCGTCGCTCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028850