BGIOSGA028852

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Revision as of 08:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028852| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028852, complete gene.| tag = OS08G04...")
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Gene Name

BGIOSGA028852

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028852, complete gene.

LocusTag

OS08G0476100

Ensembl Transcript ID

BGIOSGA028852-TA

Ensembl Protein ID

BGIOSGA028852-PA

Length

6873

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25055211..25062083

Sequence Coding Region

25055211..25055438,25055492..25056018,25056170..25056204,25056283..25056896,25056948..25057176
,25057279..25057310,25060894..25061019,25061781..25062083

Genome Context

<gbrowseImage1> name=IndicaChromosome08:25055211..25062083 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:25055211..25062083 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTTGGAGACGGAGAGATCCACAACCATGGCTGTATCGTCCTCAGGGGTTTTAGCCAAGGCCACAAGGATTCCAAGCGAGGTCATAGGGATTCCAAGCAAGGCCACAGTTCCAACCGAGGCCTCAAGGATTTCACCCGAGACCACAGGGATTTCAGCATAGGGGTTTTCGTCCTCAACAATCAAGGCCTTTGGGTGGAGCTCTTAGGGAAAATCAGATATGGCAAGGATAAGTTGAATCAACAGAAGATAGGTGAAGTTGTGTCTGTAGTAGAGGAGAAAGAGAAGAATTTAGGGTCTAAGATAGAGCAGGTTGAGGTTAAAGGTGAAGCTGGGTTAATTGTGCAGCAGAAGAGGGAGAGCTCTAATGTGGAGGCTATGTTAAACAAGGAAAAGAAAAGTGAGGAGTCAAAGACAGAAGGGGATACAAAAGGTGTGGTGAAAGATGGGGTTGATAAGGGTGCCCAAATCAGGAAATGGTGTGGGAAATGTAGATCTATGGGTCATATAGCTAAAGATTGTGTAGTGAGAAAATACTGTGTGATTTGCTCTAAGGTTTCTCATAATACTGATGAATGCTTTGTGGCACAACAACCAAAGCCAGTGGCAAAGATGGTGGGATATGCAGCTGGTGGGTTGGGATGTGTCCTCAAACAGAATGCTAAAAGTACTATGGGAAAAGAACATGTGAATCCCAAAGCAATCATAACAGTTTTGGATGAAGGAAAGTTGGCTGGAAAGCAGTTGGAAGAAAGTGTAAAGAGATGGTCCCATGAAGCTGAGGCTGTGGGCTCAAATCTTGGTCCTGTGTTTGAGATAGATATGGAACTGCTAAAGCTAGAAGACTGTGTAAGAATTAAAGTTGGAGTTCTGGATCCTGGGGCTTTACCATTGACTTTTATCCTTACAGATACTAAAGGTTTAATGTATGCAGCACATTATCACCTGGAAGAAATTGTGGAAGTGGGATGGTTCCAGGGAAAAGAGAAGCTAAAACAAGGGGAGGATGATGGTCACTCTAAAGGGTTAGAGGTCTTGGGAGTGGGGAGTTCAAGAAAAGGGAAAGTTGTGAGGCAAGATATAGAGAAATATTGTGATGACTGTTGTGCTTTCAGTGGAGGAAAGAATAAGGGGGGAGGTTTACGGGGGCAGCTAGGTCAGAGCATGAGCAAAGGGGAAATGGTTAGAAATTTGAGTCAGATAGAGAAGGATAGGGAGTTGGCTGAAGCTTTACAAATGGAGGAGCAATTGAAAGTGAGTACAGAAGTGGGTCAGCCATCTGGGATGGGAGGAAAGATTAAAAATGATGGAAGAGAGATGAATGAGGTGATGGTGAAGGATAAAGAGAGGAATGACGAAGACAAAATGGAAGAAGACATGCCAAAAAAACCTGTTATGGCAAGAGAGCAATTAGAGGCTGAGGGGGAAAGAGTTCAGCTAATAGGCAGTGAAGAAATGGAATCTCAGGAGTCAGGGGGAGATAACATCAAAGGTAAAGAAGATCATAAGAGTGAAGAGGAAGCTGAATTTGAAGAAGGAAAGAAGAACAAGAGGCTCAGAGATAAAGAAGATAAGAAGATATTGGAAATGGCGATGGAAAGGAAGGAAGCAAAAAATGCATTTATCAACAAAGATGCTAACACACAGGTTCTTAGAGACCTAGAGGTGAACCCGAAGGGGGTGAAATCCGGCAATGGCGCGGCGGCGGCGGCGAGAGGGGTTTTTGGACTGGACTGGCCTGAGCCGTCGGTGACATTCGCGCTGTCCTGCGGAAGCTGGTCTTCGCCGGCGGTGAGGGTGTACACGGCTTGCCACGTCGAGGAAGAGCTGGAGGCAGCCAAGAGGGACTACCTGCAGGCCGCCGTCGGCGTCTCGACGGCGACCAGCATCTCGATCCCCAAGCTCCTGCACTGGTACCTTCTTGACTTCACCAAGGACGTGAGCTCCCTCATGGACTGGGTGTGCCTGCAGCTGCCCGGCGAGCGGCGGCGGCACGCCGTCGAGGCCGTCGAGGCCAGCCGCCGGAGCCCGTCGCCGCCGCCTATCCAGGTTGTGCCGTACGAGTTCAGGTTCAGGTATCTTCTGGCCACGTAG</cdnaseq>

Protein Sequence

<aaseq>MLGDGEIHNHGCIVLRGFSQGHKDSKRGHRDSKQGHSSNRGLKDFTRDHRDFSIGVFVLNNQGLWVELLGKIRYGKDKLNQQKIGEVVSVVEEKEKNLGSKIEQVEVKGEAGLIVQQKRESSNVEAMLNKEKKSEESKTEGDTKGVVKDGVDKGAQIRKWCGKCRSMGHIAKDCVVRKYCVICSKVSHNTDECFVAQQPKPVAKMVGYAAGGLGCVLKQNAKSTMGKEHVNPKAIITVLDEGKLAGKQLEESVKRWSHEAEAVGSNLGPVFEIDMELLKLEDCVRIKVGVLDPGALPLTFILTDTKGLMYAAHYHLEEIVEVGWFQGKEKLKQGEDDGHSKGLEVLGVGSSRKGKVVRQDIEKYCDDCCAFSGGKNKGGGLRGQLGQSMSKGEMVRNLSQIEKDRELAEALQMEEQLKVSTEVGQPSGMGGKIKNDGREMNEVMVKDKERNDEDKMEEDMPKKPVMAREQLEAEGERVQLIGSEEMESQESGGDNIKGKEDHKSEEEAEFEEGKKNKRLRDKEDKKILEMAMERKEAKNAFINKDANTQVLRDLEVNPKGVKSGNGAAAAARGVFGLDWPEPSVTFALSCGSWSSPAVRVYTACHVEEELEAAKRDYLQAAVGVSTATSISIPKLLHWYLLDFTKDVSSLMDWVCLQLPGERRRHAVEAVEASRRSPSPPPIQVVPYEFRFRYLLAT</aaseq>

Gene Sequence

<dnaseqindica>1..228#282..808#960..994#1073..1686#1738..1966#2069..2100#5684..5809#6571..6873#ATGCTTGGAGACGGAGAGATCCACAACCATGGCTGTATCGTCCTCAGGGGTTTTAGCCAAGGCCACAAGGATTCCAAGCGAGGTCATAGGGATTCCAAGCAAGGCCACAGTTCCAACCGAGGCCTCAAGGATTTCACCCGAGACCACAGGGATTTCAGCATAGGGGTTTTCGTCCTCAACAATCAAGGCCTTTGGGTGGAGCTCTTAGGGAAAATCAGATATGGCAAGGTCTGGAATATAATTCATCTCAATCTCCTACATCTACAAACCCACCTACTCAGGATAAGTTGAATCAACAGAAGATAGGTGAAGTTGTGTCTGTAGTAGAGGAGAAAGAGAAGAATTTAGGGTCTAAGATAGAGCAGGTTGAGGTTAAAGGTGAAGCTGGGTTAATTGTGCAGCAGAAGAGGGAGAGCTCTAATGTGGAGGCTATGTTAAACAAGGAAAAGAAAAGTGAGGAGTCAAAGACAGAAGGGGATACAAAAGGTGTGGTGAAAGATGGGGTTGATAAGGGTGCCCAAATCAGGAAATGGTGTGGGAAATGTAGATCTATGGGTCATATAGCTAAAGATTGTGTAGTGAGAAAATACTGTGTGATTTGCTCTAAGGTTTCTCATAATACTGATGAATGCTTTGTGGCACAACAACCAAAGCCAGTGGCAAAGATGGTGGGATATGCAGCTGGTGGGTTGGGATGTGTCCTCAAACAGAATGCTAAAAGTACTATGGGAAAAGAACATGTGAATCCCAAAGCAATCATAACAGTTTTGGATGAAGGAAAGTTGGCTGGAAAGCAGTTGGAAGAAAGGTTTTGCACAACAGTTTAAGTGGGTTTGGGAATGGAGAGCAAAACCTTTGTCTAATGGTGCTTTTTAGATGAGATTCCCAAATGAAGAGAAATTGGAGGAGCTGTCGAATTTTGTTTCGTTTGGACTGAAAGGCACATGTGTTCAGATTAGTGTAAAGAGATGGTCCCATGAAGCTGAGGCTGTGGGTAAGCTGCATACTGTGTAGGTTAATGTGGAAGGGGTCCCTGATGTAATGAAAGATTATCATGCTCTGTGTGAAGTAGGCTCAAATCTTGGTCCTGTGTTTGAGATAGATATGGAACTGCTAAAGCTAGAAGACTGTGTAAGAATTAAAGTTGGAGTTCTGGATCCTGGGGCTTTACCATTGACTTTTATCCTTACAGATACTAAAGGTTTAATGTATGCAGCACATTATCACCTGGAAGAAATTGTGGAAGTGGGATGGTTCCAGGGAAAAGAGAAGCTAAAACAAGGGGAGGATGATGGTCACTCTAAAGGGTTAGAGGTCTTGGGAGTGGGGAGTTCAAGAAAAGGGAAAGTTGTGAGGCAAGATATAGAGAAATATTGTGATGACTGTTGTGCTTTCAGTGGAGGAAAGAATAAGGGGGGAGGTTTACGGGGGCAGCTAGGTCAGAGCATGAGCAAAGGGGAAATGGTTAGAAATTTGAGTCAGATAGAGAAGGATAGGGAGTTGGCTGAAGCTTTACAAATGGAGGAGCAATTGAAAGTGAGTACAGAAGTGGGTCAGCCATCTGGGATGGGAGGAAAGATTAAAAATGATGGAAGAGAGATGAATGAGGTGATGGTGAAGGATAAAGAGAGGAATGACGAAGACAAAATGGAAGAAGACATGCCAAAAAAACCTGTTATGGCAAGAGTAGTGATAGCTAATGTCAACACACTTGAGGAGTTTACATTATCATAGTAGGAGCAATTAGAGGCTGAGGGGGAAAGAGTTCAGCTAATAGGCAGTGAAGAAATGGAATCTCAGGAGTCAGGGGGAGATAACATCAAAGGTAAAGAAGATCATAAGAGTGAAGAGGAAGCTGAATTTGAAGAAGGAAAGAAGAACAAGAGGCTCAGAGATAAAGAAGATAAGAAGATATTGGAAATGGCGATGGAAAGGAAGGAAGCAAAAAATGCATTTATCAACAAAGGTAACATTCACATTCCTTCTTTTATTTCTGAGTCCAATATTTCGCTAGTTCAAATGGCACAAGTGATAGGAGTTGATTTGGGTTGTTCTATTGATGCTATAGATGCTAACACACAGGTTCTTAGAGACCTAGAGGTAGCCAGAATAAATTTGTATAAGAAAGCGATGGGGGAAAAGGAAAATAATGGAGAGCTCTTGCAAAAAAAGGGCAACTTGACCCTGAAGTAACTCTAGATGTAGAAGAGACTGATGAGGAGAATGATTTGGACTTTGATTTAACAGAAATTTTGATGAGTCATCTTAAGACTCCAAGATCAGGGAAGAAAAAGGGGAGAAAAGGAAACCTTGAAATTTGCAAGGGAACCCCCAAGATTAATAGAGACTTGGGAAGGAGGAAAATAAGAAAATAAATGAAAGGTTTAATCTGGAACATTAAGGGGATGTGGGATGATGAGAAACTGCAACATCTAAAAGAGGTTTTACAGAAAGAAAAAATTGATTTCCTGGGCTTGCAGGAAACATGTAAGAAAGATTTTACTGCTTCCTTTTTGAACAAAATTAATTCCTCTTATATCACTAAATGGATGTGGTCTCCTTCCAATGGAAGGTCTGGAGGGATCTTGGTAGGTATAAATGAAACAATCTTTGAAATTATGGAAGAGGAGTATGAGAATTTTTTTGTGAGAGTGTTGTTAAGAAATAAGGAAGATAATTTTACTTGGAATCTTGTTGTAGTTTATGGTGCTGCTCAGTTGGATCAGAAAAGGGCATTCTTAGCAAGTTTAGCACATGTTTGTCAGAAGAACAAGGGCCCTATCTTGTTAGGAGGGGACTTTAACATAATTAGGAAAGAGAGTGAAAAGAATAAGAAAGGTGGATATAATAGGTGGAGCTTTATTTTTAATGTCATAATTGATCAAAACAACTTGAGAGAACTGGAAATGAATGGTAGGAAGTTTACTTGGAGTAATAGCCAAAAGAATGTGACCCATGAAAAATTAGATAGAATTTTAGTTTCTATTGACTGGGAACATAAATATCCTATGGCTGTAGTAAGGAACTTGGAAAAGGTGTTCTTTGATCATGTGCCCCTTTTAGTGGATACAGGTCAGAAACCTGAGAATCATTCTATTTTTAAATTTGAACTAAGTTGGATGCTGAGAGAGGATATACATGAGGTAGTTAAGAAGATCTGGGAAAATGACCAAGGGGGAGGTGTAAGTTTAGATAGATGGCAGAGGAAGCTGAAAAGATTGAGAAGGGTTTTTAAAGGTTGGAATATGAATTGGGAGGGGACTTATAAGAGGGAGAAATGGAAGATTGTACAGAGATTGAATGAGATAGACATTCTGAGTGAAACAAATGGTATGGATGATGTCTTAAGGGAAGAGAAAAGGTATTTGGAAGAACAACTGAAATTTACAATGAGAGAAGAAAAGTTAAAATGGTTTCAAAGGAGTAAAGAGAAAGACATTTTAGAATGGGATAATAATACAAAGTACTATCATGCAAAAGCTAATGGAGAAAGAGAAAAGAGAGAATTTACTCTTTAAACAAAGATGGGGAAGTGATTGCAGGGCAGCAAGAGTTGGTTAAATTCATAGCAAATTTTTATAAAAACTTGTTTGGGCCACCTGAAGAAACAGAAGTTAGATTACATAACTTGGAGATGAGTCAATTGAGTGAACAACAAAAGGACGATTTGATGAGACCTTTTTCTATGGAATAACTGAAAGAAGTTGTTTTTGAAATGGAAAACAATAAAGCTCCTAGGCTAGATGGCTTTCCTGTGGACTTTTATAAGGCTTTTTGGGAAATTATTAAGATGGACTTGAAGGATCTTCTAGATGATTTTCATAGAGGGCTTTTGGAAATGAGGAGGTTGAATTATGGTGTTATTACTCTTATACCAAAATGTAAAGATGCTTTGCAGATAGAGAAATTTAGACCGATTTGCTTATTGAATGTAAGCTTTAAGATAATAACCAGAGTTTTGATGAAGAGATTGACTAAAGTAATAGGACTTTTGATTGAGAAATCACAAACTGCTTTTATCAAAGGAAGGTATATCATGGAGGGGTAGTGGTTATGCATGAAATTCTTAATACAATGCATCAAAATAAACATGCTAGGTTGCTCTTTAAAGTTGATTTCGAAAAAGCTTACGATAAAGTTAAATGGCCCTTTGTGTACCAGATGATGAGAGCGAAAGGTTTTCCCGAATCTTGGTGTGATTGGGTGATGAGATGTGTAATTGGTGGTAAAGTGGCTGTTAAGGTTAATGATGAAATAGGGGGTTTTTTTCAGACTTACAAAGGACTGAGACAAGGGGATTCGTTATCTCCCTTACTGTTTGATATTGCTGCAGATGCATTGCCTTTGTTGATGCATAGAGCAGTAGATCAGGGGCTGGTGAGGGGTTTGGGTCAGGAGTTTCTAGAGGAGGGGGTTGCTATTTTACAATATGCTGATGACACTATTTTCTTATTAGAAGACAATGTGGAATATGCTAAAAAACTGAAATATATTTTGTGTCTTTTTGAACAAATGTCTGGGCTTAAGGTGAACTTTCATAAGAGTGAAGTTTACCGTCTTGGGGAGGCTGCAGAGAAGAAAGAAATTTATAGTCAAATTTTGACTTGTAAAATGGGAGATTTGCCCATGAGATATTTAGGAGTTCCTATTGATAAAAAAGAATTCATAATATAGATTGGAAACCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGACCAGACACTAGTTGAAAGCAACTGTATTTGCTTCGTCGGATTCTTAAGCCTCCGCCGCCCATAGGGCCGCCATTGACTTCAGACTCCTACTCCGTTCTCGGACTCCCAGCCCGCTGCCACCTTTGCGCCGCTGTCGCCGACCAAGTCTGCCGCTGACGAAGGAGGGGATAGAGGACTAGCTCCATCTCCATCCAGAACAGCTACTCACCAAGTCCGCGACGCCGTCGGTGACAAAGGAAGGAACGGTGGGCTAGCCCCTGTCACCACCGCCCATTGAGACCACCGGTGATGGAGAACTTGCCGCCATACAGCAACCATGCCCATCACCGGAGCGCCCCACTAACCGGCAACCTCCACCACTGCCACCACCCCCGGCCAACCGGCGCCATAGGCGCCTGCCTTGCCGACTGCCACTGGGCGTGGCCGCTCCCGCCGTCGACATCACCTCCACTGCGTCGCTCGCCGGAGCCAGGCGAGACCCACCGTGCCGCCCTCTCTCTAGGAAGGGGACTGAGGAGGAAGCCTTGCCGCCAACCCAGCGGACCTGCACTCTCCGGTGACCTGCTCGAACGGTGGCAAGTTGAAAAGCGACGACGGCGGTGAGGATTTACAGGACCGGGCAACTAGCCAGCAGCCGCCGAGCGCTGAGCAGAAAAGGTGGAAAAGGGAGAAATGGGAAAGGGAAAAAGGTGAAAGGGGGAGGTGAAAAGGGAGGAGGTGGGTGGGGGCGCCGCCGGCGGCTGCGGCACCGGCGCCGGCGCCGGCGAGGTGGGCGACGAGGGGAAAAGCGCTGGGAGTCCTGTTCTCCTCCCGGGTCGCCTCAGAGAGCGACACGGGAGTCAAAGCGTCCCCACAATTTCCGTATAATATGACGGGATAACAGGAATCTTGATAAGCGAAGAGATGAGGAGGATATAAGATGATGTTTATGCCTTTGTGGACAGGTGAACCCGAAGGGGGTGAAATCCGGCAATGGCGCGGCGGCGGCGGCGAGAGGGGTTTTTGGACTGGACTGGCCTGAGCCGTCGGTGACATTCGCGCTGTCCTGCGGAAGCTGGTCTTCGCCGGCGGTAAGTTTCTCCGGCGTGCCGGTGAATTTTCTCTCTGCTCTCGGTGTGCATTCTGCATGTGCTAGCTAACTTCAGATTGAAAAAAGGAACAAAAGTTAACGTGTATGGTACTATGGTGTGTATCTTTTCAACTGCTACATCATGAATTTGCCGGGAAGCTCTGTGTGGCAGCTAGCCAGCTAGCACTCTAGCAGCCTGCGATTATAACAAGCTGCAAAGGCAAAAGTTGAACAAGCTGCACTTTACTAATTGTACTGAAAAGTACAGTAGGAATATTTGTTAGGGCACAAATATAAGTCGTTTGGTGTAATCAAGTTGGTTGCAGACTTGCAGTCTAGGGAAGAGTACTGAATACTACTAATGTGTGAGAATTCAGCATAATATAAAGCTATCACTATTAGGCAGTAAAAATGCAGACCACTACAATGTGAGCAGGGTTTACTATTTCAGACTGCATAAACATTTAGGTGGTTTCGGAAATTTAAACAGATTTTGTTAAATTGATTTCCTTTTTTCTTTTTTTGCAAAATTCAGTAAAACTTGTTTTGTTTTCGGAAATTTCAAAATGTTAGTACTGAAATTGTGAGACTGAATATGATACTGAACTCCTCACTGCACTGGAAATGTTGATTTTATTAAGAGAAGCGTATTCCAGTATGATTTTATTAGAGAATGGTATTTTTTACACGGCCACCACTAGGCTACATTTCATTTGGTATTGGAAATGCTGATGACATAGGAGTATTTTTCTCTCTACGCAGGTGAGGGTGTACACGGCTTGCCACGTCGAGGAAGAGCTGGAGGCAGCCAAGAGGGACTACCTGCAGGCCGCCGTCGGCGTCTCGACGGCGACCAGCATCTCGATCCCCAAGCTCCTGCACTGGTACCTTCTTGACTTCACCAAGGACGTGAGCTCCCTCATGGACTGGGTGTGCCTGCAGCTGCCCGGCGAGCGGCGGCGGCACGCCGTCGAGGCCGTCGAGGCCAGCCGCCGGAGCCCGTCGCCGCCGCCTATCCAGGTTGTGCCGTACGAGTTCAGGTTCAGGTATCTTCTGGCCACGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028852