BGIOSGA028854

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Revision as of 08:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028854| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028854, complete gene.| tag = OJ1666_...")
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Gene Name

BGIOSGA028854

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028854, complete gene.

LocusTag

OJ1666_A04.14

Ensembl Transcript ID

BGIOSGA028854-TA

Ensembl Protein ID

BGIOSGA028854-PA

Length

3782

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25147388..25151169

Sequence Coding Region

25147388..25147531,25147873..25147958,25148044..25148086,25149072..25149128,25149212..25149269
,25150201..25151048,25151137..25151169

Genome Context

<gbrowseImage1> name=IndicaChromosome08:25147388..25151169 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:25147388..25151169 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGAAAGAACATGCAGAGAAAGGAGATGGCGTTCAAGAATGCCAATCGTCTCCTGCGCTTTCAGAAGATAACTTGAGGCACAGTTTCCGATTGGGAGATATTACATGGGTTAAGCACACTGGCTCGTGGTGGCCAGCACAGGTCGTTGAAAATTCATGTATCAGCAGCAAGCCTAAGAAGACGGCCAAGCATCATGTTCCAGTTCGTTTGTATGGCACTTGTGTACACATGTACGTAGACCCTTGGAAGTCTAACATGGAATTCAAAATGATGCTGAAGCGAGAGAATAAAAGTGCAATGGAAGCATTCCATGAGGCCGTTAAGAAGGAGCTGTCCCACGTTAATTCACCTTGCGATTCTACTGAAGAAGCTGGCAACTTGAAAGCCAAGACCTCTTCCAAGAAAGTCAGAAAGCAAAAGGGCTTAAAGGAATCACCAGCCTCTGAGCATATGGGAGAGGATACAAAAGACCAGCATAGTGCAGAGCAGCACCAAGAACTTGGATATACTGCAACAACTGGAGTTGCCACTCGTAAAGGAAGAAGAACGCGAGAAGGTGCAAGACAACTCAGTCCTACTGATGGTGAAGATCAAGCCAGTGGTAAAAAAGCTTCTATTGAGGGTTCAAGTTATAAGACAGAAAAACAAGTTGGTTCTGTATATGATGAAGAGGCTTGTAAGATGACAACGACAGAGAGATCAGTGGGTAGAAGGGAAGGACTGAGACGATCTGCTTGTACACCCATGAAGGCATATTTAGATCCATCGGAGGATAGAACATCACTTTTCAGTGATACAAGTGCAAGTGAAGGTGCAAATGAAGTAAATAGAACACCAGAGAATTCAAATCAGCATGAAGATGATTCAACCATAGATGGAACTTTGGCTTCTCATGCAGAAATAAGGGTTATGGTTAGGGATATACTGTTCAGTGACATTATTGCCAAGCAGCATGCTGCTGAGATGGCATATGTAGATGAAGTGATCAATGGCATTTGCTGCGCTAGTGAATTGAACATAACTGGTGATCCTACTCCTGTTGCAAAGGGTGGACGAGGCATCAAACGAGGTGGTAGTAGGGCAGAGGCGGAGTCAAGTAACATTACACAGAGATCTAGAAAAGGGAGAATAGATCAAGCAAGTAGCAATGGAAAGAAAAGAGCTAAGGACACCTCAGAAACCATGAATCATGACAACAGTCCCAACTCTTTGAGAGGGCCTTTCGATAGTACTGGATGCAGCCATGGAGGAACTGGGGCAAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MVKEHAEKGDGVQECQSSPALSEDNLRHSFRLGDITWVKHTGSWWPAQVVENSCISSKPKKTAKHHVPVRLYGTCVHMYVDPWKSNMEFKMMLKRENKSAMEAFHEAVKKELSHVNSPCDSTEEAGNLKAKTSSKKVRKQKGLKESPASEHMGEDTKDQHSAEQHQELGYTATTGVATRKGRRTREGARQLSPTDGEDQASGKKASIEGSSYKTEKQVGSVYDEEACKMTTTERSVGRREGLRRSACTPMKAYLDPSEDRTSLFSDTSASEGANEVNRTPENSNQHEDDSTIDGTLASHAEIRVMVRDILFSDIIAKQHAAEMAYVDEVINGICCASELNITGDPTPVAKGGRGIKRGGSRAEAESSNITQRSRKGRIDQASSNGKKRAKDTSETMNHDNSPNSLRGPFDSTGCSHGGTGAS</aaseq>

Gene Sequence

<dnaseqindica>1..144#486..571#657..699#1685..1741#1825..1882#2814..3661#3750..3782#ATGGTGAAAGAACATGCAGAGAAAGGAGATGGCGTTCAAGAATGCCAATCGTCTCCTGCGCTTTCAGAAGATAACTTGAGGCACAGTTTCCGATTGGGAGATATTACATGGGTTAAGCACACTGGCTCGTGGTGGCCAGCACAGGTACGATTGCATACATCTTCCGAGCTTTAACTTTGAATGCACAAAGTATCGTTCTTTCATAAGATGATGAGATATTTTCAGTGAACGGTGCATTAGGCAGGCTATATTCTAAATCGTAAAATATTAATGTTGGCTGGGATAATAGATTGACATTTGTAGATATATGGAATTGGCATGAACTTCTTTTTGAAGTTCAGATGATAATGCCACCATCTTTATGCATATGTGATGCAGAAGCTAAGAAGTGGACTTTTGCTGACTGCTACTTTGTCCATGATCCTAGTTTTCCCATGTGTATATTTACACTGGTTTTATTTTGTTTTTTTTCCTCTGAATTCAAGGTCGTTGAAAATTCATGTATCAGCAGCAAGCCTAAGAAGACGGCCAAGCATCATGTTCCAGTTCGTTTGTATGGCACTTGTGTACAGTAAGGGATCTTATTAATGCGCTATGCCTTCTTTTCTTTCCATGATATTCTGGTGACAAAAGTTTATTTCTTTTACTATTTTCAGCATGTACGTAGACCCTTGGAAGTCTAACATGGAATTCAAAATGGTATGCACAATATCTATTTATAAGGATACTGATATATTGTCATTGCTCCCGTGCCACTCATTGTAGATTTAGAAAGAAAGTGCCTCTGACACAGTTGACCATGAATTCCATAACTCACAGTCATCCTCCCTTTCTCCTTTGATGTTCCCCTCACTTTAAACCTCTCAAGTAAAAAACTTCCAAATTGAACAACTTGACTCCCAACTGCATTTCAAACTTTGAACCATAAAATTCCCAATATTATAAACCATGGTTCAAACTTTAAACTATGAAAATAAAACAAATTTCAACTGCAAATAACAACTTTCAATTAAACAACACAATTGCTTTCAAATCAACACTTTGAATGCTTCAGGCATGACATCAGATCTAAGGGCAGCGGCAGCACGTGCTTGATCCACTAGTAGCAGCATGGCAGTGGAGTTAAAAAAATGTGCCAGATCAAGTGTGAGAATGGAGTGAATGGGGGAGAGAATGAAGAAGTGAAAGGAGATTTTCACATGGTCGCAGATAACTTAGCTGCCTCTAAATCATAGTTGGCCTGTTCTAAACTTCTACTCCCTCTGACAGATATCCAAGGCAACCATGATGTCACTAGGTGCTTTCTTGGCTGGTTGTTGGCTTATAAGCAACAGCCAGAATTTGAATTCTAGAACTTAATTTTAGAGTTGATTTGGGTTTTTGTAATTGTTTTCTATTTTTCAGCCTTGTCTTTTGGACTGCTAAGAAAGTAAGAATAGAAATATAAAAGTCTTACCCTAAAATTATATTTGATTGCTTCGTTTATTTTCTTCGGCTTACCAGGTTATCACTGCAGTATGATAACATAAACCAGTTTAGAATGGTTATAATACAACTACTTGAAAAAGCTGGTTTGGGCTTTCAAACTTTTAAAAAAATCTGTGCCATTTATCTTTTCTCTTGGAAGAAAATGAATCATATCGATATTCATTTTATATTTCACATATGAGCTCATCGCATGCAGATGCTGAAGCGAGAGAATAAAAGTGCAATGGAAGCATTCCATGAGGCCGTTAAGAAGGTACGACAGTCACCTTTGCATAATTGCATCACATATGTTAAGATGTAACTATGTTTAGCTGCTGAAAACATCCCATAATGCAGGAGCTGTCCCACGTTAATTCACCTTGCGATTCTACTGAAGAAGCTGGCAACTTGAAAGGTGAGTTTCTGTTTTTACCTGAAGATATATATCACATATACAAGTTTTTTTTTACTCAGCTTTTTAGTGGTTATGGATAATGATTTGATCATTCGTTCAATCCCTTATTCGCTCTTTATTACTAGAGAATTTTTGTTCTTCTGCCATCCAGAATTTACCCCTCTTGCTACTACTGTCAGTTAGACTTTTTGTAAAATGACCATTCCAACCCTGCCTCAAAGCTAACCATTGTAGACCTTCTGTCAGTGGGAGAAAATATCTAGGTGGATGACTGGATAACTGGATGACACAGTGAGGTTTATAAAACTGATATATGGGTCACATTGTCAGTAACTCATTGTTGAGGCATGTTAGTCTTTATTGGAATCGAGAACAAGAAAATGGTAATCGATTACATTTGAACAAGCAGTAGTGGAAAACAGAAAAGAGCCATATGGCGATACTAACAATAGATAGAGCAGAATTTGGATGACAGAAGAAAGAATAGCTATTTTACTAGTAAAAAAAAAGAAATTATATGTCAACAATGCTCTTTTTCTGTTAATAAAATCCTTGCAATGGTGGTATTAAGAAGTAGTATGGAGCAGCATCACTTTGAAGGTAATTGATATACATGATCTTCAAAGTTCAAACATCACATAATATCAAATATTGCTCAATTGGATATGACGAACATAACATGCAAATGTACTCTTTTTCTATGAAACAAAAGGATTTTTTTTGCTTGGTGAAATGCAAGCATGTATAAGTTTAAAACTGTCATTAATTTTGATGATATCAAGTGGGTTCTACAGACAACATGTCAATGGCACATTGGTATTATTTCCTGACTCATGCCATCTATTTAGTATTAATCCATTTGCCCCTAATTTTGCTTCTTTACTATGTACCTAAATTTATTTTCCTGATGGTGTGACTGAATTGGACACAGCCAAGACCTCTTCCAAGAAAGTCAGAAAGCAAAAGGGCTTAAAGGAATCACCAGCCTCTGAGCATATGGGAGAGGATACAAAAGACCAGCATAGTGCAGAGCAGCACCAAGAACTTGGATATACTGCAACAACTGGAGTTGCCACTCGTAAAGGAAGAAGAACGCGAGAAGGTGCAAGACAACTCAGTCCTACTGATGGTGAAGATCAAGCCAGTGGTAAAAAAGCTTCTATTGAGGGTTCAAGTTATAAGACAGAAAAACAAGTTGGTTCTGTATATGATGAAGAGGCTTGTAAGATGACAACGACAGAGAGATCAGTGGGTAGAAGGGAAGGACTGAGACGATCTGCTTGTACACCCATGAAGGCATATTTAGATCCATCGGAGGATAGAACATCACTTTTCAGTGATACAAGTGCAAGTGAAGGTGCAAATGAAGTAAATAGAACACCAGAGAATTCAAATCAGCATGAAGATGATTCAACCATAGATGGAACTTTGGCTTCTCATGCAGAAATAAGGGTTATGGTTAGGGATATACTGTTCAGTGACATTATTGCCAAGCAGCATGCTGCTGAGATGGCATATGTAGATGAAGTGATCAATGGCATTTGCTGCGCTAGTGAATTGAACATAACTGGTGATCCTACTCCTGTTGCAAAGGGTGGACGAGGCATCAAACGAGGTGGTAGTAGGGCAGAGGCGGAGTCAAGTAACATTACACAGAGATCTAGAAAAGGGAGAATAGATCAAGCAAGTAGCAATGGAAAGAAAAGAGCTAAGGACACCTCAGAAACCATGAATCATGACAACAGTCCCAACTCTTTGAGAGGGCCTTTCGATAGTACTGTAAGTAGATTCCCTTGCCCACGCCCATACTTCTAAACCTTACTATCTCAAATTTCAACACTAATTTGACCAAAATCCACCAGAGCAGGGATGCAGCCATGGAGGAACTGGGGCAAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028854