BGIOSGA028867

From RiceWiki
Revision as of 08:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028867| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028867, complete gene.| tag = P0419H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028867

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028867, complete gene.

LocusTag

P0419H09.9

Ensembl Transcript ID

BGIOSGA028867-TA

Ensembl Protein ID

BGIOSGA028867-PA

Length

3279

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25544937..25548215

Sequence Coding Region

25544937..25545009,25545122..25545228,25545324..25545443,25545771..25545950,25546105..25546263
,25546348..25546517,25546568..25546762,25547133..25547485,25547644..25547820
,25548136..25548215

Genome Context

<gbrowseImage1> name=IndicaChromosome08:25544937..25548215 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:25544937..25548215 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGCTCCCCCGCAGTGGCGTGCTGGTCTTTGGGCTTGTGTGCGTGTTCCAACTGTCGCATTCGTCTTCAGATGATGACTTCACCAAGGTTAGGGCGGTGAACCTGGGAGGTTGGTTGGTGGTGGAGGGGTGGATCAAGCCTTCGTTGTTTGATGGCATCTCAAACGGGGACATGCTTGATGGCACTCAGGTGCAGCTGAAGTCAGTGGGGCTCCAGAAGTACCTGAGCGCAAATGGTGGTGGCGGCGGGAACTTGACAGTGGATCAGGATGTTGCTTCAACATGGGAGACCTTCAGGCTTTGGAGAGTTTCTTACCGTGAATATCAATTCCGGTGCATCAAAGGTCAGTTTTTAACAGCAAGTAATGGAGATGTGATCTCAGCAACTGCAGATTCACCAGGAGACACTGAATCATTTTACATCGAAAGGAACAATTCAATGCTTCATATCAAGCTTTTAAATGGGGGCTATCTGCAGGTCACAAACAATAATCAGCTTACTTCAAATTATCCTTCCCAGCCAGGATGGGATGATGGTATGGCAACATTTGAAATGACTATTGTTGCCAACAACTTACATGGAGATTACCAACTTGCTAATGGGCTTGGGCCTGATCAGGCAATGGTTGTCTTAACAGAACACCGAAAAAACTTTATTACAGGAAAAGATTTCTATTTTCTTTCAAAAAATGGTATAAATGCAGTTAGGATTCCAGTTGGATGGTGGATTGCATATGATCCTAATCCACCTGCTCCATTTGTCAGTGGTTCCCTGGATACCCTGGATAGAGCATTCTACTGGGCACATTTCAAGTCTGCACAGTATGGAGGTTCTGATTTTGATATCAGGATTTATGGCTTGAAGTGCATCATTGATCTTCATGCTGCTCCTGGCTCTCAAAACGGAATGGAACACAGTGCAAGTAGGGATGGTTCAGTAGATTGGCCTTCACCAGCTAACATCGAGAAAACACTGGATGTCATTAATTTTCTGGCTCAAAGATATGCAAACAACCCCTCTCTCCTAGGTATTGAGCTATTGAATGAGCCTTCTGCAGGCGCGGTACCACTAGGCACTCTAGTGTCGTATTACAAAACAGGATACCAGATTGTACGAAGTTATTCGGACAAAGCTTACGTTATATTCTGCCAGAGGATTGGGAATGCAGACCCAATGGAGCTTTATCAGGCTGACCTGGGTCCAACTAACACTGTTGTAGACTTGCATTACTACAATCTGTTTGATCCGTTTTTTGAGAAACTTAATGCAACAGAGAACATACAGTTCATATACAATAACAGAATGCCTCAAGTGCAGGCCTTGGATAAAGCGAATGGACCTCTTGTTTTTATTGGAGAATGGGTAAATGAATGGAATGTGACAGACGCTTCACAAACCGAATACCAGTTGTTTGGAAAAGCCCAATTAGAGGTCTACGGGGAAGCCTCCTTTGGCTGGTCTTATTGGACAGTCAGGTGCAACAGTGTGCACTGGGATTATGAATGGAACAAAAGGAATAGGTACCTCATTGGTGGTTCACCGTTGGAAAGCCCAAAGTACATGCTTCTTGTGGCAGGATGCCTACTCTATCTTTTATTTATATTGACATGA</cdnaseq>

Protein Sequence

<aaseq>MGLPRSGVLVFGLVCVFQLSHSSSDDDFTKVRAVNLGGWLVVEGWIKPSLFDGISNGDMLDGTQVQLKSVGLQKYLSANGGGGGNLTVDQDVASTWETFRLWRVSYREYQFRCIKGQFLTASNGDVISATADSPGDTESFYIERNNSMLHIKLLNGGYLQVTNNNQLTSNYPSQPGWDDGMATFEMTIVANNLHGDYQLANGLGPDQAMVVLTEHRKNFITGKDFYFLSKNGINAVRIPVGWWIAYDPNPPAPFVSGSLDTLDRAFYWAHFKSAQYGGSDFDIRIYGLKCIIDLHAAPGSQNGMEHSASRDGSVDWPSPANIEKTLDVINFLAQRYANNPSLLGIELLNEPSAGAVPLGTLVSYYKTGYQIVRSYSDKAYVIFCQRIGNADPMELYQADLGPTNTVVDLHYYNLFDPFFEKLNATENIQFIYNNRMPQVQALDKANGPLVFIGEWVNEWNVTDASQTEYQLFGKAQLEVYGEASFGWSYWTVRCNSVHWDYEWNKRNRYLIGGSPLESPKYMLLVAGCLLYLLFILT</aaseq>

Gene Sequence

<dnaseqindica>1..73#186..292#388..507#835..1014#1169..1327#1412..1581#1632..1826#2197..2549#2708..2884#3200..3279#ATGGGGCTCCCCCGCAGTGGCGTGCTGGTCTTTGGGCTTGTGTGCGTGTTCCAACTGTCGCATTCGTCTTCAGGTGAGGAGAGCATCTTGTGGCTCAGTCATGGTGCTTTATCAGTGTGTGATGGTTCTTGCTGCCATGGTTAAGGAGTGGGAGGTTTAGAGTGTCTCTCTGATTGTCTTTGCAGATGATGACTTCACCAAGGTTAGGGCGGTGAACCTGGGAGGTTGGTTGGTGGTGGAGGGGTGGATCAAGCCTTCGTTGTTTGATGGCATCTCAAACGGGGACATGCTTGTAGGCTCTCTGGTTCTTGGAGGTTTGGAGCTCATGTTGTGGCAATGTCGTGCATTTTACTTTCTTCTCATGTGACTGTCGGATTTTCGCCTCAGGATGGCACTCAGGTGCAGCTGAAGTCAGTGGGGCTCCAGAAGTACCTGAGCGCAAATGGTGGTGGCGGCGGGAACTTGACAGTGGATCAGGATGTTGCTTCAACATGGGAGACCTTCAGGGTTTGTTGTCTTTTCTGTGTCAATGCTAAAGATTTTGACGATTCATAAATCGATATTACGCGTATATTTTTTTATCATATGCATATATTACTCAGTTCCTACTTGGAGATTCTGTGAAAGCTGCATGAAAAATGGCATTATCTTCATCAGTTTTTAGGCCCATAGCTTATTTTTCTGTTAATGCACTACTTATGTTCCTGAAGTTAGGAAACAGCTAGAAATCAAAGTGTTATTAAAAAAATCAACAAGACCATCAAGTGCTTGAGTCACTGGTTAATAAATGGCCGAGTTTCCATCCTAATTGCATTTTCTTGGTGCTCCTGTCAGCTTTGGAGAGTTTCTTACCGTGAATATCAATTCCGGTGCATCAAAGGTCAGTTTTTAACAGCAAGTAATGGAGATGTGATCTCAGCAACTGCAGATTCACCAGGAGACACTGAATCATTTTACATCGAAAGGAACAATTCAATGCTTCATATCAAGCTTTTAAATGGGGGCTATCTGCAGGTTTTCTCATGTTCTCAATCTCATACATTCATGATGTCAAATGGCAGAAAGCCCTGTCATCAGATACCTTGCTATAGAAAAAAAAAGTTTTAGTTTTTGGTTCATCAGTACCAACGTAAATAGTGACATAGTTGACTTATATTCCATTGTTCAGGTCACAAACAATAATCAGCTTACTTCAAATTATCCTTCCCAGCCAGGATGGGATGATGGTATGGCAACATTTGAAATGACTATTGTTGCCAACAACTTACATGGAGATTACCAACTTGCTAATGGGCTTGGGCCTGATCAGGCAATGGTTGTCTTAACAGTAAGTTTCATAATTTCAGAGCTGTGTCATTCCCGGGGTTGCAGTGCATTTCGTTGCTCACGTACTGTTTTATTTATTTTACAGGAACACCGAAAAAACTTTATTACAGGAAAAGATTTCTATTTTCTTTCAAAAAATGGTATAAATGCAGTTAGGATTCCAGTTGGATGGTGGATTGCATATGATCCTAATCCACCTGCTCCATTTGTCAGTGGTTCCCTGGATACCCTGGATAGAGCATTCTACTGGGCACAGTAGGTCTAGACTCTAAACTGTTGTTGTTAATTACTATTTCCTTTTGAAGTTTCAAGTCTGCACAGTATGGAGGTTCTGATTTTGATATCAGGATTTATGGCTTGAAGTGCATCATTGATCTTCATGCTGCTCCTGGCTCTCAAAACGGAATGGAACACAGTGCAAGTAGGGATGGTTCAGTAGATTGGCCTTCACCAGCTAACATCGAGAAAACACTGGATGTCATTAATTTTCTGGCTCAAAGGTAGCACCGATCCATCCACTATATTTTCTTGTATATCATGAAAAAATTGCTTTAGGTGAATGAAATGTTTCTTCAATATGCAATTGGTGGCATGAGGGTAGATAATGTCATAAGGGCTCTGGGGAAAAAATCGATGTCCCATTCTTTTCTTTTCTTTTCATTCATCTGAAATCATTTCCTACTTGAATTATGATTACTATGATAAATCTATTCATTCATAAGAAAATGCACGAAAGTAAGGAGCCATTGGATCCACCGAGAATCTATCCAAAATAACATGAAAAGCAATAATATGCATAACAACCCGGCAAAATAATATGCATAATACATGTTCCATAGTTCTAACAAGATGTACACTCTTTATCTGCAGATATGCAAACAACCCCTCTCTCCTAGGTATTGAGCTATTGAATGAGCCTTCTGCAGGCGCGGTACCACTAGGCACTCTAGTGTCGTATTACAAAACAGGATACCAGATTGTACGAAGTTATTCGGACAAAGCTTACGTTATATTCTGCCAGAGGATTGGGAATGCAGACCCAATGGAGCTTTATCAGGCTGACCTGGGTCCAACTAACACTGTTGTAGACTTGCATTACTACAATCTGTTTGATCCGTTTTTTGAGAAACTTAATGCAACAGAGAACATACAGTTCATATACAATAACAGAATGCCTCAAGTGCAGGCCTTGGATAAAGCGAATGGACCTCTTGTTTTTATTGGTAGGTCCTGCAAAATCAATTTCCTTTGCTCTTTTCTTTTCATAATTTTTTCTTCTTCTCTGTAATGAATAATGGTGCTTTCTCAATTTATCCAACTCTGTGCAGCCATTCTTTCCTTGTATTCGGTACATCTTAATCCCCGTTTTCTCATTTTTCAGGAGAATGGGTAAATGAATGGAATGTGACAGACGCTTCACAAACCGAATACCAGTTGTTTGGAAAAGCCCAATTAGAGGTCTACGGGGAAGCCTCCTTTGGCTGGTCTTATTGGACAGTCAGGTGCAACAGTGTGCACTGGGATTATGAATGGAACAAAAGGAATAGGTACCTCATTGGTAAGCAATTTATCCTGTTCTAGGTTCTCCGGAGCTGCTTTCTAATATCCAGTCATTCTATACTAAACTCTATTATCACCATATAGCATATGCAGTGGGATTGCATTAGTTTTGTGATTACTTTTGCTTGGTTTATGCCATAAAGTCACATTAAGCTTGGTCGTATTAATTAACACAGGCATATGCGTCATATAACGGCTGATGGGTAATAGTTGCTCTACTAGAACTTAGATGAGTTGCAGCGTCTATTTCACCTTGCAGTTCGATCCAGTACTCTCCATTTTCTGTGCTAACTTTTTTTTTTTCACTTCGTAGGTGGTTCACCGTTGGAAAGCCCAAAGTACATGCTTCTTGTGGCAGGATGCCTACTCTATCTTTTATTTATATTGACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028867

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028867&oldid=35124"