BGIOSGA028909

From RiceWiki
Revision as of 08:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028909| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028909, complete gene.| tag = P0686H1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028909

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028909, complete gene.

LocusTag

P0686H11.31

Ensembl Transcript ID

BGIOSGA028909-TA

Ensembl Protein ID

BGIOSGA028909-PA

Length

4091

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26023966..26028056

Sequence Coding Region

26023966..26024142,26024241..26024328,26024770..26024855,26025056..26025209,26025421..26025581
,26025662..26026330,26026438..26026756,26026886..26027103,26027276..26027453
,26027557..26028056

Genome Context

<gbrowseImage1> name=IndicaChromosome08:26023966..26028056 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:26023966..26028056 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCCGCCGGCAGCAGGAGGGCTCGCCGGAGCCCGCGGCGAGGGCGGCGGAGCAGGGGTGGGGAGGGTCTTCGTGGGCGCTGGGTGCAACCGCGTGGTGAACAACGTCTCCTGGGGAGCTTGCGGCCTCGTCGCCTTCGGCGCGCAGAACGCCGTCGCGCTCTTTTCCCCTTTGAGAGGTGAGATTGTGACGACGCTTCCGGGGCACAAGGCCACGGTGAACTGCACCCTTTGGTTGCCCACGAAGAAGGATGTGCTCCAAATCCGCTCCAGGGAGAGACACTATCTATTATCAGGAAGTTCTGATGGTATTATCATGGCATGGAAGATTGATTCTGGAAAAGGAGAGTGGACTCGTGCGTTGCAACTGCCTGTGATGCACAAAAAAGGGGTCACCTGTCTTGCTGGAAGGATGGTGTCAGATACTGTTTCAATATTTGCCTCCACCTCCTCAGATGGAACTGTGGTCATTTGGAAAATGGAAGATGAACCAACTAGTGTTGGCAGCTGTGAAGTGTCTTGTTTGCATTCTATATCCGTTGGTCCAAAGCCAATGGTTTCACTTTCATTAGCAGTATTGCCTGGGCAGGGAGGCCATCTCATTTTGGCAATGGGAGGTTTGGATCACAAGGTCCACATTTATTGTGGGGATCAGTCAGGCAAGTTCATTAAAGCTTGTCAGCTTAAAGGTCATTCTGATTGGATTAGAAGTTTAGACTTCTCTTTACCTGTGATGATGGGCAGTGAGGAGCACAGCCTTTTCCTTGTTAGCTCATCTCAGGATAGAACCATTCGGATCTGGAAAATGAATTCGGATGCTGTTTCTTCTGCTCACACAACACCCAGAAAGGAAGATATTGGGATTGCCTCCTATATTGAAGGTCCTTTGTTTGTGTCCAGTAATACACATTACCAGGTATCATTGGAGTCCCTTCTCGTTGGTCATGAGGACTGGGTGTATTCTGTAGAATGGCAGCCTCCTACGCTACTAACTGATGATGAAGCTCATCAGCCAATGAGCATATTATCTGCATCCATGGACAAGATGATGATGATATGGAAGCCAGAGAAAAATACCGGTCTTTGGATAAATTCAGTGACTGTTGGTGAGTTAAGTCACTCAGCACTGGGATTCTATGGTGGCCATTGGCAGCCTGATGGCAAATCCATCCTTGCACATGGATATGGTGGATCGTTTCATATGTGGAGGGATGTTGGACTGGGTTCTGAAAACTGGCAGCCTCAGATAGTCCCATCTGGTCATTTTGCACCTGTATCTGACTTAACATGGTCAAGATCTGGTGAATATCTGTTATCAGTCAGCCATGATCAGACAACACGCATATTTGCTCCTTGGAGAAGCCAAGTTAGCCCAGGGGATGTGACTTGTTGGCGTGAAATTGCTCGCCCTCAAATTCATGGGCACGATATTAACTGTGTGGCATTCATTCAGGGTACCGGGAACCACCGGTTCGTTAGTGGCGCCGATGAAAAGGTCTCTAGAGTCTTTGAAGCTCCTTTGTCATTTTTGAAGACCCTTCAACATGCAACTTTGTTGAAAACTGATAACTCTGGAGATTTTGACGATGTGCAAGTACTTGGAGCAAATATGTCTGCTCTTGGACTTTCACAGAAACCTATATATACACATGGACCAAGGGAAACCCAAAGCAGTATTTCTAATGACGGGCCAGATTCCATGGAGACCATTCCTGATGCAGTGCCAACTGTGTTCACTGAGCCTCCTGTAGAGGATCAACTAGCCTGGAATACTCTATGGCCTGAAACTCACAAACTTTATGGCCATGGAAATGAACTCTTCTCCATCTGCTGTGATCATGAAGGGAAGATCATTGCATCATCTTGCAAGGCTCAATCAGCACCAGTTGCTGAGATCTGGCTGTGGGAGGTTGGAACATGGAAAGCTGTTGGCCGCCTGCAATCTCACAACCTGACAGTTACACAGATGGAGTTTTCTCGTGACAATGCTTTTCTTTTGAGTGTATCAAGGGATCGTCATTTGTCTGTCTTCTCAATCAGGAAGACAGATGATGGAGCAGAGCATCATCTTGTTGCAAAGCTTGAAGCACACAAAAGAATTATATGGGCATGCTCATGGAACCCCTTCAGCTACGAATTTGCAACTGGATCAAGGGACAAGACCGTCAAGATATGGAGCGTTCAAGATTCATCTTCTGTCAAGCTGCTCGTGACGTTGCCTCAGTTCCACGACAGTGTGACAGCATTGGCCTGGACAGGCCGTGACCGTGCTAGTAATGCTGGCATTCTCGCTATTGGCATGGACAACGGAATGATCGAGCTCTGGAACATTTCAGGGGGGAGAGCCTCCACTGACAGCAGCGGCTCAGGTTCATCTCCGCTCAGCTTTGCATGCATGCTCCGTTTTGATCCTCTGCTGTGTCATGTATCAACTGTGCACCGTTTACGGTGGCAGAAATCTGACTCATCCGATGAGAAATCAGCGCTACAGTTAGCTTCTTGTGGAGCTGATCATTGTGTAAGGGTGTTTGAGGTCCGTGACATTTGA</cdnaseq>

Protein Sequence

<aaseq>MSPPAAGGLAGARGEGGGAGVGRVFVGAGCNRVVNNVSWGACGLVAFGAQNAVALFSPLRGEIVTTLPGHKATVNCTLWLPTKKDVLQIRSRERHYLLSGSSDGIIMAWKIDSGKGEWTRALQLPVMHKKGVTCLAGRMVSDTVSIFASTSSDGTVVIWKMEDEPTSVGSCEVSCLHSISVGPKPMVSLSLAVLPGQGGHLILAMGGLDHKVHIYCGDQSGKFIKACQLKGHSDWIRSLDFSLPVMMGSEEHSLFLVSSSQDRTIRIWKMNSDAVSSAHTTPRKEDIGIASYIEGPLFVSSNTHYQVSLESLLVGHEDWVYSVEWQPPTLLTDDEAHQPMSILSASMDKMMMIWKPEKNTGLWINSVTVGELSHSALGFYGGHWQPDGKSILAHGYGGSFHMWRDVGLGSENWQPQIVPSGHFAPVSDLTWSRSGEYLLSVSHDQTTRIFAPWRSQVSPGDVTCWREIARPQIHGHDINCVAFIQGTGNHRFVSGADEKVSRVFEAPLSFLKTLQHATLLKTDNSGDFDDVQVLGANMSALGLSQKPIYTHGPRETQSSISNDGPDSMETIPDAVPTVFTEPPVEDQLAWNTLWPETHKLYGHGNELFSICCDHEGKIIASSCKAQSAPVAEIWLWEVGTWKAVGRLQSHNLTVTQMEFSRDNAFLLSVSRDRHLSVFSIRKTDDGAEHHLVAKLEAHKRIIWACSWNPFSYEFATGSRDKTVKIWSVQDSSSVKLLVTLPQFHDSVTALAWTGRDRASNAGILAIGMDNGMIELWNISGGRASTDSSGSGSSPLSFACMLRFDPLLCHVSTVHRLRWQKSDSSDEKSALQLASCGADHCVRVFEVRDI</aaseq>

Gene Sequence

<dnaseqindica>1..177#276..363#805..890#1091..1244#1456..1616#1697..2365#2473..2791#2921..3138#3311..3488#3592..4091#ATGTCGCCGCCGGCAGCAGGAGGGCTCGCCGGAGCCCGCGGCGAGGGCGGCGGAGCAGGGGTGGGGAGGGTCTTCGTGGGCGCTGGGTGCAACCGCGTGGTGAACAACGTCTCCTGGGGAGCTTGCGGCCTCGTCGCCTTCGGCGCGCAGAACGCCGTCGCGCTCTTTTCCCCTTTGGTCCGCGCCGCCCCGTCTCGCTTGCTCCTCTCTCTCTTCCTTTGATTATTAGTACTCCATTATCTGTTGATTTAACCGATTTGGTTATGTGCGAGCAGAGAGGTGAGATTGTGACGACGCTTCCGGGGCACAAGGCCACGGTGAACTGCACCCTTTGGTTGCCCACGAAGAAGGATGTGCTCCAAAGTAAGTTTATTTATTTGTTTATTTATTTATTTATTTATTTATTTATTTATTTCTTTATTTCTGCTGTTATATTGCTTGTGTTCATATCTGTATATTGGAGTAATTTCAGTCCAAACTTTGTATAATATTGTTCAAATAACTTTTCTTCATATCTGGATGTTAGAGTAATTTCAGTTCAAACTTTGGATAATATGGCTGAAATAACTCCTTTAGACATCATGATGTCATATTACTGAGCTCCATTTTTTTTGGGAAAATTTTAAATTGCGTTTCAGCACTCTGTTACTGTAATTCGGAAATGGATGTGAGGAAGTAGTTCATTGAATATTTGTAGGTGCTAAGCTATTGGTATTGTAGATTACTTTAGATTTTAGATCAAAGGGGAAAAATGTTCTGATTCTGACAGATGAGTTTTTGGCTGTTATTCTTTGTGGTTTCTAGTCCGCTCCAGGGAGAGACACTATCTATTATCAGGAAGTTCTGATGGTATTATCATGGCATGGAAGATTGATTCTGGAAAAGGAGAGGTCAATTTCTTCTGTCTTCAGTCTTCACCTTACCATCTTTGCATAGATTGTTCTATAACTCCGTTAATGACTTCCACCTGCAGTATCCTATGACTAGAACTGGTTGCAATTTTATTTTCTGGGAAATGTTTCTACGTTGTCTTGAGGATTGACTCAAGTGGTTAACAGCAATTCTTTTTGTTTTTCTGTCTGCATTGCAGTGGACTCGTGCGTTGCAACTGCCTGTGATGCACAAAAAAGGGGTCACCTGTCTTGCTGGAAGGATGGTGTCAGATACTGTTTCAATATTTGCCTCCACCTCCTCAGATGGAACTGTGGTCATTTGGAAAATGGAAGATGAACCAACTAGTGTTGGTAAGATAACAGACACATAGATTGTGATAAATTGTAGTTAGAGCCTAATCTTGTTATTGTATCTGGAAGAAATCCATATTGATTCTAACTGGTATCTAAAGTAAGCTCTATTGGTCAAATTATAATTCTAGTAACTGTTTGATTTTGATCTTAAAGTTTAAGGATATGTGCACTGCTGCCCAACTGAAGTAATTTGCTTCCATATGTGCAGGCAGCTGTGAAGTGTCTTGTTTGCATTCTATATCCGTTGGTCCAAAGCCAATGGTTTCACTTTCATTAGCAGTATTGCCTGGGCAGGGAGGCCATCTCATTTTGGCAATGGGAGGTTTGGATCACAAGGTCCACATTTATTGTGGGGATCAGTCAGGCAAGGTTTGTAACTGATGCTTTAGTCTCTTTTTGCTATCCGTTATTGCATTGCTTGTCTTAAGTAAGGTTTTTTTGGTGTGCAGTTCATTAAAGCTTGTCAGCTTAAAGGTCATTCTGATTGGATTAGAAGTTTAGACTTCTCTTTACCTGTGATGATGGGCAGTGAGGAGCACAGCCTTTTCCTTGTTAGCTCATCTCAGGATAGAACCATTCGGATCTGGAAAATGAATTCGGATGCTGTTTCTTCTGCTCACACAACACCCAGAAAGGAAGATATTGGGATTGCCTCCTATATTGAAGGTCCTTTGTTTGTGTCCAGTAATACACATTACCAGGTATCATTGGAGTCCCTTCTCGTTGGTCATGAGGACTGGGTGTATTCTGTAGAATGGCAGCCTCCTACGCTACTAACTGATGATGAAGCTCATCAGCCAATGAGCATATTATCTGCATCCATGGACAAGATGATGATGATATGGAAGCCAGAGAAAAATACCGGTCTTTGGATAAATTCAGTGACTGTTGGTGAGTTAAGTCACTCAGCACTGGGATTCTATGGTGGCCATTGGCAGCCTGATGGCAAATCCATCCTTGCACATGGATATGGTGGATCGTTTCATATGTGGAGGGATGTTGGACTGGGTTCTGAAAACTGGCAGCCTCAGATAGTCCCATCTGGTCATTTTGCACCTGTATCTGACTTAACATGGTCAAGATCTGGTGAATATCTGTTATCAGTCAGCCATGATCAGGTGAGTTCTTAGAACAGTTCTAATCCTAGCTAATAGAATGTAGTATGTTAATTGTCATTCTCCTCACCACTTACTAATCCTCTTTTGCATCAACAATAAATACGCAGACAACACGCATATTTGCTCCTTGGAGAAGCCAAGTTAGCCCAGGGGATGTGACTTGTTGGCGTGAAATTGCTCGCCCTCAAATTCATGGGCACGATATTAACTGTGTGGCATTCATTCAGGGTACCGGGAACCACCGGTTCGTTAGTGGCGCCGATGAAAAGGTCTCTAGAGTCTTTGAAGCTCCTTTGTCATTTTTGAAGACCCTTCAACATGCAACTTTGTTGAAAACTGATAACTCTGGAGATTTTGACGATGTGCAAGTACTTGGAGCAAATATGTCTGCTCTTGGACTTTCACAGAAACCTATATATACACATGGTCAGCATTCATCATGCCCTCTTCATGAATATACCATATCCTTTGTTTGGCACTTGTATTAGTACATAATTTAACTTTTCTGAGTTCTTCATTTGGTTGTTACTTATGTCTGTTGACGGTTGTATTCAGGACCAAGGGAAACCCAAAGCAGTATTTCTAATGACGGGCCAGATTCCATGGAGACCATTCCTGATGCAGTGCCAACTGTGTTCACTGAGCCTCCTGTAGAGGATCAACTAGCCTGGAATACTCTATGGCCTGAAACTCACAAACTTTATGGCCATGGAAATGAACTCTTCTCCATCTGCTGTGATCATGAAGGGAAGATCATTGCATCATCTTGCAAGGTAATGTATATCTCTGGAGTCTGGATATCCATGAAATATTTTATCACATCTTGTCTGGAAATAACACATTTCTCAATTTGTCCTCATGTATGGCATAGTAACATTAGTTCATGCACTTTATGCTCGTAGTTTGGCTTGACGAGTGTGATGTAGTAATGTGACCTTGTTGCAGGCTCAATCAGCACCAGTTGCTGAGATCTGGCTGTGGGAGGTTGGAACATGGAAAGCTGTTGGCCGCCTGCAATCTCACAACCTGACAGTTACACAGATGGAGTTTTCTCGTGACAATGCTTTTCTTTTGAGTGTATCAAGGGATCGTCATTTGTCTGTCTTCTCAATCAGGAAGACAGGTAAGGACTTCTTCCTATGATCTAGTAGTTCCTACAAATTTGTAAACTGCCAATATTTATCTGTTGTGTAATTATTGATGTCATTCCACTTGTGTAACTCTAGATGATGGAGCAGAGCATCATCTTGTTGCAAAGCTTGAAGCACACAAAAGAATTATATGGGCATGCTCATGGAACCCCTTCAGCTACGAATTTGCAACTGGATCAAGGGACAAGACCGTCAAGATATGGAGCGTTCAAGATTCATCTTCTGTCAAGCTGCTCGTGACGTTGCCTCAGTTCCACGACAGTGTGACAGCATTGGCCTGGACAGGCCGTGACCGTGCTAGTAATGCTGGCATTCTCGCTATTGGCATGGACAACGGAATGATCGAGCTCTGGAACATTTCAGGGGGGAGAGCCTCCACTGACAGCAGCGGCTCAGGTTCATCTCCGCTCAGCTTTGCATGCATGCTCCGTTTTGATCCTCTGCTGTGTCATGTATCAACTGTGCACCGTTTACGGTGGCAGAAATCTGACTCATCCGATGAGAAATCAGCGCTACAGTTAGCTTCTTGTGGAGCTGATCATTGTGTAAGGGTGTTTGAGGTCCGTGACATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028909

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028909&oldid=35166"