BGIOSGA028950

From RiceWiki
Revision as of 08:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028950| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028950, complete gene.| tag = OJ1506_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028950

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028950, complete gene.

LocusTag

OJ1506_F01.29

Ensembl Transcript ID

BGIOSGA028950-TA

Ensembl Protein ID

BGIOSGA028950-PA

Length

2540

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26528718..26531257

Sequence Coding Region

26528718..26529678,26530171..26530214,26530412..26530507,26530606..26531116,26531223..26531257

Genome Context

<gbrowseImage1> name=IndicaChromosome08:26528718..26531257 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:26528718..26531257 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAAGAACGGCAGCAGCTACGGCGAGAGCTCGTCGGACGACGTGGAGGCGCCGCTGCTGCTGCCGGCGGCGAGGGGCGGGACGATGGCGAAGGGTGATCGTCGACGTCCGGCGTCGTCGGCGGCGGCGGCGTGGGTGCGCGCTCTGCTCGCGCACAAGTACCCGGCGATCGCGGCGGGGCCGGCGGCGTGCGCGGCGGTGTGCGCCGCCGTGGACCTCGGGGACGGGCACGGCGAGGCGCGGAACATGCTGGGCGTGCTGGCGTGGGTGTTCCTCTGGTGGGTCACCGGCGCCGTGCCGCTCGCCGTCGCGTCCATGGCGCCGCTGTTCCTCTTCCCGGCCCTGGGGATCTCCTCCTCCGACGACGTCGCCAGGGCGTACATGGGCGACGTCATCTCCCTCGTCCTCGGCAGCTTCATCCTCGCCCTCGCCGTCGACCACCACCGCATCCACCGCCGCCTCGCCCTCAACGTGCTGTCCCTCTTCTGCGGCGATCCGGTGCGGCCGTCGCTGCTGCTCCTCGGCGTCACCGGCACGACCGCGCTCGTCAGCATGTGGATCCACAACACGGCGTGCACGGTCATGATGATGCCGGTGGCGACGGGGATCCTGCAGAGGTTCCCCCGCGGCGACATCGACGACGGCGGCGGGCAGGAGGTGCGGCGATTCTCCAAAGCGGTGGTGCTCGGCGTGGTGTACGCGTCGGCGATCGGCGGCATGGCGACGCTGACCGGCACCGGCGTGAACATCATCCTGGTGGGGATGTGGTCGTCCTACTTCCCGGAGCAGAGGCCCATCACCTTCAGCTCATGGATGTCCTTCGGCCTCCCCATGGCGATCATCCTCTTCCTCGCGCTCTGGCTCACCCTCTGCCTCATGTACTGCTCCAACAACACCGCCAAGGCCCTCTCCGCCTACCTCGACAGAAGCCATTTGAGACGAGAGCTCAGCTTGTTAGGTCCAATGGCTTTTGCAGAGAAGATGGTCTTGGCTGTGTTTGGGGGCCTAGTTGTGCTGTGGATGAGTAGGAACATAACAGACAACATCCCTGGATGGGGAGTTCTTTTCCACAATAAAGTTGGGGATGGCACAGTTACTATCATGATGGCCACCCTTCTGTTCATAATCCCCAGCGGGAAGAGGGAGGGTGAGAAGCTGATGGACTGGAACAAGTGCAAGAAGATCCAGTGGAACATCATCCTTCTCCTCGGCGCAGGATTCGCCATTGCCGATGGCTTCAAGACGAGCGGCCTCACCGACATCCTCTCCAACGGCCTCAGGTTCCTGAAAGGGGCGCCGACGCTGGTGATCGTGCCTGTCGCCTGCGTTTTCAGCGGGATCATGACAGAGTTCACTTCTGACGACTCAACCACGACGCTGGTGCTGCCATTGTTCGCTGAACTTGCCAAATCCATTGAGGTGCACCCTGCCTTGCTCATGGTTTCCGGCGCAATCGGGGCCCAGTTGTCATACTTGTTGCCCACCGGATCGCCGTCAAACGTTGTCGGCTTCAGCACCGGCTACATTACCATCAAGGATCTGGTGGCCACTGGGTTGCCCCTGAAAATTGTTGCCATTGCAGCTCTGACAGTCTTACTGCCAACATTAGGATCAACGATTTTTGGCATGGACATCAAGTCATAG</cdnaseq>

Protein Sequence

<aaseq>MDKNGSSYGESSSDDVEAPLLLPAARGGTMAKGDRRRPASSAAAAWVRALLAHKYPAIAAGPAACAAVCAAVDLGDGHGEARNMLGVLAWVFLWWVTGAVPLAVASMAPLFLFPALGISSSDDVARAYMGDVISLVLGSFILALAVDHHRIHRRLALNVLSLFCGDPVRPSLLLLGVTGTTALVSMWIHNTACTVMMMPVATGILQRFPRGDIDDGGGQEVRRFSKAVVLGVVYASAIGGMATLTGTGVNIILVGMWSSYFPEQRPITFSSWMSFGLPMAIILFLALWLTLCLMYCSNNTAKALSAYLDRSHLRRELSLLGPMAFAEKMVLAVFGGLVVLWMSRNITDNIPGWGVLFHNKVGDGTVTIMMATLLFIIPSGKREGEKLMDWNKCKKIQWNIILLLGAGFAIADGFKTSGLTDILSNGLRFLKGAPTLVIVPVACVFSGIMTEFTSDDSTTTLVLPLFAELAKSIEVHPALLMVSGAIGAQLSYLLPTGSPSNVVGFSTGYITIKDLVATGLPLKIVAIAALTVLLPTLGSTIFGMDIKS</aaseq>

Gene Sequence

<dnaseqindica>1..961#1454..1497#1695..1790#1889..2399#2506..2540#ATGGACAAGAACGGCAGCAGCTACGGCGAGAGCTCGTCGGACGACGTGGAGGCGCCGCTGCTGCTGCCGGCGGCGAGGGGCGGGACGATGGCGAAGGGTGATCGTCGACGTCCGGCGTCGTCGGCGGCGGCGGCGTGGGTGCGCGCTCTGCTCGCGCACAAGTACCCGGCGATCGCGGCGGGGCCGGCGGCGTGCGCGGCGGTGTGCGCCGCCGTGGACCTCGGGGACGGGCACGGCGAGGCGCGGAACATGCTGGGCGTGCTGGCGTGGGTGTTCCTCTGGTGGGTCACCGGCGCCGTGCCGCTCGCCGTCGCGTCCATGGCGCCGCTGTTCCTCTTCCCGGCCCTGGGGATCTCCTCCTCCGACGACGTCGCCAGGGCGTACATGGGCGACGTCATCTCCCTCGTCCTCGGCAGCTTCATCCTCGCCCTCGCCGTCGACCACCACCGCATCCACCGCCGCCTCGCCCTCAACGTGCTGTCCCTCTTCTGCGGCGATCCGGTGCGGCCGTCGCTGCTGCTCCTCGGCGTCACCGGCACGACCGCGCTCGTCAGCATGTGGATCCACAACACGGCGTGCACGGTCATGATGATGCCGGTGGCGACGGGGATCCTGCAGAGGTTCCCCCGCGGCGACATCGACGACGGCGGCGGGCAGGAGGTGCGGCGATTCTCCAAAGCGGTGGTGCTCGGCGTGGTGTACGCGTCGGCGATCGGCGGCATGGCGACGCTGACCGGCACCGGCGTGAACATCATCCTGGTGGGGATGTGGTCGTCCTACTTCCCGGAGCAGAGGCCCATCACCTTCAGCTCATGGATGTCCTTCGGCCTCCCCATGGCGATCATCCTCTTCCTCGCGCTCTGGCTCACCCTCTGCCTCATGTACTGCTCCAACAACACCGCCAAGGCCCTCTCCGCCTACCTCGACAGAAGCCATTTGAGACGAGAGCTCAGCTTGTTAGGTATACGTGACATCCCGTTTCTTGATACTATCTACTCCCTCCGTCCCTAAATATTTGACGCCGTTGACTTTTTTAAACATGTTTGACCGTTCGTCTTATTCAAAAAATTTAAGTAATTATTAATTTTTTCTCTATCATTTGATTAATTGTTAAATATATACTTTTATGTATACATATAGTTTTACATATTTCACAAAAGTTTTTAATAAGACGAATGGTCAAACACGTTTAAAAAAGTCAACAGCGTCAAATATTTAGGCACAGAGGGAGTATATCCGTTCCAAAATATTGCTACCTAGAACATAAAAAATGTGTTTACCTTTGGTTGTATATCACTGCTAAAAAGTTGACAATTGACCTGTGGTCATCACTTGGATAATTCTGATTGGGCTAAGTATTTTTCTGCCTCAACAGTTGATTAATAACAGCCACAAATTCAGTATCTAATTCTAAGTCCATGATTGTCTGATGAGGTGTCATGATCTATGACAGGTCCAATGGCTTTTGCAGAGAAGATGGTCTTGGCTGTGTTTGGGGTAAAATTCTATTTCTATTTTTTTTTTCTAATCCAACACTAGCTATGTTCTGATTTTATGACCATAAATTTCAATATGAAGAATATGCAGGGTTTGGTTTCTGTCATACAAATTGAAACTGATTATTTGTGCTATCTTGGTAAAACTAACTGAAATGGACCCTTTTTTTTTTCTTTTTTTTCTTTTTTTTTTTGCAGGGCCTAGTTGTGCTGTGGATGAGTAGGAACATAACAGACAACATCCCTGGATGGGGAGTTCTTTTCCACAATAAAGTTGGGGATGGCACAGTTACTGTAAGTGCTAAAATAATCACAAAGACAAAAATTACTGGGCTAGCGAGCCAGTTGCATTTACCTGATCTTATACAGAAGCAAATCACTTTGCAATGCAGATCATGATGGCCACCCTTCTGTTCATAATCCCCAGCGGGAAGAGGGAGGGTGAGAAGCTGATGGACTGGAACAAGTGCAAGAAGATCCAGTGGAACATCATCCTTCTCCTCGGCGCAGGATTCGCCATTGCCGATGGCTTCAAGACGAGCGGCCTCACCGACATCCTCTCCAACGGCCTCAGGTTCCTGAAAGGGGCGCCGACGCTGGTGATCGTGCCTGTCGCCTGCGTTTTCAGCGGGATCATGACAGAGTTCACTTCTGACGACTCAACCACGACGCTGGTGCTGCCATTGTTCGCTGAACTTGCCAAATCCATTGAGGTGCACCCTGCCTTGCTCATGGTTTCCGGCGCAATCGGGGCCCAGTTGTCATACTTGTTGCCCACCGGATCGCCGTCAAACGTTGTCGGCTTCAGCACCGGCTACATTACCATCAAGGATCTGGTGGCCACTGGGTTGCCCCTGAAAATTGTTGCCATTGCAGCTCTGACAGTCTTACTGCCAACATTAGGTAACATTCCTGCACAGATCAACATTAAGGATTAGTCAGTAGTTAGTAACTTACTGTTGTTTTCTGACTTAATCTAATGCTTTTTTTTGTTAATTTGATCGTTCAGGATCAACGATTTTTGGCATGGACATCAAGTCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028950