BGIOSGA028951

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Revision as of 08:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028951| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028951, complete gene.| tag = OJ1506_...")
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Gene Name

BGIOSGA028951

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028951, complete gene.

LocusTag

OJ1506_F01.30

Ensembl Transcript ID

BGIOSGA028951-TA

Ensembl Protein ID

BGIOSGA028951-PA

Length

5509

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26533231..26538739

Sequence Coding Region

26533231..26533962,26535160..26535309,26536133..26536838,26537640..26538032,26538387..26538433
,26538716..26538739

Genome Context

<gbrowseImage1> name=IndicaChromosome08:26533231..26538739 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:26533231..26538739 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGCCTGTACGCACGTACCACCACCACCACCACCACAACAACAGCAACAACCATCGGCTACGCCGCATCATCCCCCGAGTCCTCCTCGCCGTCTTCGCCATCTACGCCGTCTCGTTCGCGGCGTACCTCCTCCGCCACCAGTCGCCGCACCCGCACCCGCACCCTGCCGCTGACCCCGAGCGCGACGCCGTGGACGCAGCCGGAGGAGGCGGAGGAGGAGGAGCCGTGGACCGTGTGCGGGTAGAAGCGCCGTCCTCGCAGAAGCCATGGCCTCGCCTCCCCTCCTTCCTCCCGTGGACGTCCGCCTCCGTTCGGCCGCCGCCGAAGCACTCCTGTGAGGGGTACTTCGGGAACGGGTTCTCCCGCCTCGTGGACGTGCTCCCCGCGCGGGGCGGCGGCGGCGGCGGGTGGTTCCGGTGCCACCACAGCGAGACGCTGCGCAGCTCGATCTGCGAGGGCGGGAGGGTGCGGCTCGACCCGGGGCTCATCGCGATGTCGCGCGGCGGCGAGCCGCTCGACCAGGTGATGGGCCGCGCCGAGGAGGAGGAGCTGCCCAAGTACGAGCCCGGCGCGCTGCAGGTGGAGGCGGCGGCGAAGAGGACGGGGCCGTTGGTGGAAGCGGGGTTCCTCGACGCCTACGTGCCCACCGGCGGGATCGGGATGCACACGATGAGGTCGCTGCTCGACTCGGGGCGCGTCGTGCCGCCCGGCGAGCTACACTGCTCGCAGTGGGTTGAAGAACCAACACTTCTAGTAACTCGTTTTGAATATGCAAACCTTTTCCACACAATTACGGACTGGTACAGTGCATATGTCAGTTCCAGAGTCACGGATTTACCTAACCGCCCTAATGTGGTCTTTGTGGATGGACATTGCAAGGCACAACTGGAGCAAACATGGGAAGCACTTTTCTCAAATGTGACATATGTTAAGAATTTCTCTGGCCCTGTTTGTTTTCGACATGCAATTCTTTCACCATTGGGCTATGAGACTGCGCTATTTAAGGGCCTTAGTGAGAGCTTTAGCTGCGAAGGTGCTTCTGCGGAGTCCCTCAGAGAAAAGCCTGATCACCAGAAAACGGCAAGGTTGTCTGAATTTGGTGAGATGATTTTAGCTTCTTTTGATCTTCTGAGGGATGACATACTGTCATCCAAAACATCAAATGGGCTCAATGTTCTCTTTGTTCGGCGAGAGGACTACTTGGCCCATCCACGCCACAGTGGAAAGGTTGAATCTAGACTAAGCAATGAGAAGGAGGTATATGATGCAATTGAGGGCTGGGCAAAAGGTCAGAAATGCAAAATAAATGTCATCAATGGTCTTTTTGCCCACATGAACATGAAGGAGCAACTGCGTGCTATACAGGAAGCTTCAGTAGTAATAGGGGCACATGGGGCTGGTCTAACTCACTTGGTTTCAGCTACCCCAGATACAAAAGTCCTTGAAATCATCAGCAGCATGTATCGACGCCCACATTTTGCATTGATCTCACACTGGAAGAGCTTAGAGTATCATGCCATAAATCTCCCTGGATCATATGCAAGGGTAACAGATGTTATCAATGAGTTGAGTAATATACTGAAAGGAGGAGGACAACACAAGCTAAGGGGAAGGAAAAGGGAGAGGAAGAAGAAGGAATGGGGAGGATGGCTGTGGGCACGGTGGTTTGCCTGCCTGCATGCATCCCGGAGGAGCACATGCCTTGTTGCTGCTGCCTGGGGCGTGAAATGGGCGTGGCTGATGATGGACGCTAGCTCGCTGGGAATCATGCCTGTTTCCTTCAGCATTTATGTGGGTCGGAGGATGGAGTTGGAATTGGCTCCGGTTTCTGCTTGGTTGGGTGGCCTGGATGCTGTGGCCTGGTCTGGACTCTGGACAGCGCCGAGGCCTTCGGATGCGGCGGTGCTGCCGGTGGTTACAGGGGTACTGCCACAGTACATGTACAGCCTTGGGCTCATGCCACTACCAATTGGCAAAGGTGTAACTTTTATCGATGGAGGGAGTAATTTAGAAAAGAGAGTACTGGTTGATGTGATGGAAAAGGACTGA</cdnaseq>

Protein Sequence

<aaseq>MMPVRTYHHHHHHNNSNNHRLRRIIPRVLLAVFAIYAVSFAAYLLRHQSPHPHPHPAADPERDAVDAAGGGGGGGAVDRVRVEAPSSQKPWPRLPSFLPWTSASVRPPPKHSCEGYFGNGFSRLVDVLPARGGGGGGWFRCHHSETLRSSICEGGRVRLDPGLIAMSRGGEPLDQVMGRAEEEELPKYEPGALQVEAAAKRTGPLVEAGFLDAYVPTGGIGMHTMRSLLDSGRVVPPGELHCSQWVEEPTLLVTRFEYANLFHTITDWYSAYVSSRVTDLPNRPNVVFVDGHCKAQLEQTWEALFSNVTYVKNFSGPVCFRHAILSPLGYETALFKGLSESFSCEGASAESLREKPDHQKTARLSEFGEMILASFDLLRDDILSSKTSNGLNVLFVRREDYLAHPRHSGKVESRLSNEKEVYDAIEGWAKGQKCKINVINGLFAHMNMKEQLRAIQEASVVIGAHGAGLTHLVSATPDTKVLEIISSMYRRPHFALISHWKSLEYHAINLPGSYARVTDVINELSNILKGGGQHKLRGRKRERKKKEWGGWLWARWFACLHASRRSTCLVAAAWGVKWAWLMMDASSLGIMPVSFSIYVGRRMELELAPVSAWLGGLDAVAWSGLWTAPRPSDAAVLPVVTGVLPQYMYSLGLMPLPIGKGVTFIDGGSNLEKRVLVDVMEKD</aaseq>

Gene Sequence

<dnaseqindica>1..732#1930..2079#2903..3608#4410..4802#5157..5203#5486..5509#ATGATGCCTGTACGCACGTACCACCACCACCACCACCACAACAACAGCAACAACCATCGGCTACGCCGCATCATCCCCCGAGTCCTCCTCGCCGTCTTCGCCATCTACGCCGTCTCGTTCGCGGCGTACCTCCTCCGCCACCAGTCGCCGCACCCGCACCCGCACCCTGCCGCTGACCCCGAGCGCGACGCCGTGGACGCAGCCGGAGGAGGCGGAGGAGGAGGAGCCGTGGACCGTGTGCGGGTAGAAGCGCCGTCCTCGCAGAAGCCATGGCCTCGCCTCCCCTCCTTCCTCCCGTGGACGTCCGCCTCCGTTCGGCCGCCGCCGAAGCACTCCTGTGAGGGGTACTTCGGGAACGGGTTCTCCCGCCTCGTGGACGTGCTCCCCGCGCGGGGCGGCGGCGGCGGCGGGTGGTTCCGGTGCCACCACAGCGAGACGCTGCGCAGCTCGATCTGCGAGGGCGGGAGGGTGCGGCTCGACCCGGGGCTCATCGCGATGTCGCGCGGCGGCGAGCCGCTCGACCAGGTGATGGGCCGCGCCGAGGAGGAGGAGCTGCCCAAGTACGAGCCCGGCGCGCTGCAGGTGGAGGCGGCGGCGAAGAGGACGGGGCCGTTGGTGGAAGCGGGGTTCCTCGACGCCTACGTGCCCACCGGCGGGATCGGGATGCACACGATGAGGTCGCTGCTCGACTCGGGGCGCGTCGTGCCGCCCGGCGAGCTACACTGCTCGCAGGTACACACACTCTTTGCCTCAGTAACCAGTAGTAGTAGCTAAAATTGGAAGTGTAAATTTGGGAGAATTTATTGTTGTATGTTGGATCCGGTTCACATGAACACTGACTTGCTTAAACATTTCATATATCTATGAAGATTGCAACAATGATTTGAACTGTAGGAGTAATAATGAGTAGAGTCCATGGCAAAAGGTGGGAAGATGTTTATAGCATGTTTCCTGTAGTAATTGCGACTAAATTTAATTAATTAATCGATTGCGAGGAAATTTCAAGAAGGCCAGGGTGTAAAAGAATTTGATTGAGTTTGGGTCCTCAGTCCTTGCTCTTCTGCTCCTGCAACAGAGGACTGAGGACTAGCGGCGAGCAATTGAGTTTGAGTTAGTTTGGTTCAGCAAGATAACATCTGCTCTGGGTGGCACCCACTATTGGATCTGGCAAATTGGCAAATAGCAAGGCAGCAATGTTAGTGCTGGCCACAGGTTTATTGGGCTAGTATGGGAACTCCTAACAATGAGTCAATGAGCTCCTTTCTTTTTGTTTGGTGAGGGAGATGGGTGTGGGCAAGAAATCTTACAGGCTATAATTTCAGTCTTCAAAGTGGTTATAGTTGTTTCATTCCCTCCCTTTCTTTTTTGTTCTACTGTTGACTTGGCAGTTTGATGGAATTTTCTTTTTCTCTTGTTAATGAGAACCCCATGAGAACCAACTGGCTATATAATGAATAAATATTTTGATTCGGTTATTTGGTTTAGGGAGAAAAAAAAAGCTTTCGGTTATTTGATTAGTCAAGTTAATCGTGCCGACGCCTTGTGCAACTGTATTGCTGTAACATATTTGATGCCTTGATTGATGCACTGTACTCATGCTTTTGGTTATTTGATTTAGTTCTGATTGGTTGCAAATTTACCATATCAATACAGATGTAGTTGACTATTTAGCGAATTGCTTAAAATTTTGCTTGGATATGGGTAGTCTGTTTTGAGCTTTGAAGATGTATCTTTGTAGCCTTTATAACACTAGATTTTTTATGAAGAAACACATGAACCTCTCAAGAAGCAGAGCATTGAATTCATTCCATGACTCCTATTGTTATATTGCAGGATTCATTTCTTCACCAATGTATACATATCACAGTAATATTTTCGTAAAGCTCCCCTAGGATAAATTCCTTTCTAATGTTATTATATTTGTTGCAGTGGGTTGAAGAACCAACACTTCTAGTAACTCGTTTTGAATATGCAAACCTTTTCCACACAATTACGGACTGGTACAGTGCATATGTCAGTTCCAGAGTCACGGATTTACCTAACCGCCCTAATGTGGTCTTTGTGGATGGACATTGCAAGGTACGTTACACGTGATGCATTTTGAGTTGCTACATTCTTTGATTGTTGATGCACTGCAGTTTAGTTGGTCTATTTCATGAACTATATAGCCTGAGTTATGGACTTTATGGTAATTAGTCTGTTTCCCTTCCTCATTTCCCTGCCAGCCAGGCTGCCACATTTCCATTTCCCTTCGCTCCTTTATAATGTGATTCTCCTCTTTCCGGGTTATTACAATAGCTTAATTTGTAGTACATTGGAATACACTTCAGGAGAGTATCAACGTCATCTTAGAGAAGTACAGTTACAGACAGTTGTATTGAAATACTAGAAAGTGAAACAAGAAGCAGAACTTTGACTTTATTGGTCATAAAATCAGTCAACTGGGGTTAACCATTTTGCCATTTTAGAGCATGCCTCTTCACCCATCATCTCAAAACCTGCTCATAAATAGCAGAACAGTTTCATCACTTCATGACTGCACTGCATGCGATTCTTTCGACTTGTTACTGTGAAGTCAGGCCAGGACCAAGTAGAATAATGATAATTATATTCCTCTTCTATTTAATGATGCAACGGAAATATCTGAGTAGGGTTTCTTGTGCAATGATTTCCTTCATATTGCAAATCAGGAGCATGGTGGTTCAATTTTGCCATTCATATAGGTTTTATTCAACGAAACCTGAAAACATGCATGCAGATACTGTTTGATGAGTGCGGCAGCATATTGTGTGATTAATGCTAGTTAACAAGACGGCTCATTTTTTACTCAATAACAGTGTTTATTTAAGTTTTCCCTGTGTATATGCTTTTGTCTTTTAACAGTATGATCTGACATTCACAGGCACAACTGGAGCAAACATGGGAAGCACTTTTCTCAAATGTGACATATGTTAAGAATTTCTCTGGCCCTGTTTGTTTTCGACATGCAATTCTTTCACCATTGGGCTATGAGACTGCGCTATTTAAGGGCCTTAGTGAGAGCTTTAGCTGCGAAGGTGCTTCTGCGGAGTCCCTCAGAGAAAAGCCTGATCACCAGAAAACGGCAAGGTTGTCTGAATTTGGTGAGATGATTTTAGCTTCTTTTGATCTTCTGAGGGATGACATACTGTCATCCAAAACATCAAATGGGCTCAATGTTCTCTTTGTTCGGCGAGAGGACTACTTGGCCCATCCACGCCACAGTGGAAAGGTTGAATCTAGACTAAGCAATGAGAAGGAGGTATATGATGCAATTGAGGGCTGGGCAAAAGGTCAGAAATGCAAAATAAATGTCATCAATGGTCTTTTTGCCCACATGAACATGAAGGAGCAACTGCGTGCTATACAGGAAGCTTCAGTAGTAATAGGGGCACATGGGGCTGGTCTAACTCACTTGGTTTCAGCTACCCCAGATACAAAAGTCCTTGAAATCATCAGCAGCATGTATCGACGCCCACATTTTGCATTGATCTCACACTGGAAGAGCTTAGAGTATCATGCCATAAATCTCCCTGGATCATATGCAAGGGTAACAGATGTTATCAATGAGTTGAGTAATATACTGAAAGGTTTTGGATGCTGAGACAGAGCTAGGTATTCATCAGGAAAGTCACCATACTAACAACACAAATGCTTACAATTTCAATGGATGGGAAGGAGGTTATTTGCATCTGTGATCTGTGAACTGATGCATTACCAGGGCTCATCACTTCATCGGAGGAATTTTTATGCTGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCGCACACTTTTCTACCATGAATTCATGGTCTTGAGGACCGATCCTCAAACTGTAATTGTAATTCATCATTTGGGACATTCGGCGACAATTCTTGTATGTTAATGCATAATGTTGAGTGCTTCTCCCCCACTGTTCATATATGTTGAAAAACTTGCCCAATGGGGCATGGCAATTGACCAAGTGTCATGCCCTTCCTACTCCCGTGTGCATGATGCATGACCAGCCTGGTTTTCTGCCATGGTGGCCTGGTGATTACTCTGGAAGATGAAATGGAGCCGTCAGGCTCATAACACCGGTGTACTTGCTTCACTTTGTTCCTTTTGCCTGCCATTACTGTACCCCTGTTTTATTGATGTGGGGGAAGAAGATATATTATTGATCTGTTGTTGTGGACTTGTGGGGGGTTCGACATGTTTTGAGTCGAAGCTTTGCTGCTGTTATTTGTGAGTATCATTTAATGTTTCACCTACTGTTTGTGCTGCATCTTGATCGATCTTTGTTGATTCTTGCAGGAGGAGGACAACACAAGCTAAGGGGAAGGAAAAGGGAGAGGAAGAAGAAGGAATGGGGAGGATGGCTGTGGGCACGGTGGTTTGCCTGCCTGCATGCATCCCGGAGGAGCACATGCCTTGTTGCTGCTGCCTGGGGCGTGAAATGGGCGTGGCTGATGATGGACGCTAGCTCGCTGGGAATCATGCCTGTTTCCTTCAGCATTTATGTGGGTCGGAGGATGGAGTTGGAATTGGCTCCGGTTTCTGCTTGGTTGGGTGGCCTGGATGCTGTGGCCTGGTCTGGACTCTGGACAGCGCCGAGGCCTTCGGATGCGGCGGTGCTGCCGGTGGTTACAGGGGTACTGCCACAGTACATGTACAGCCTTGGGCTCATGCCACTACCAATTGGCAAAGGTATGGTTTATTCTAGCTAGCAACGAATAAATTTGGCAGGTGGTCTATTTTTTGAACAGTTCTACGAAAGAATTATTATTCACTTTGTTTCAAATTACTTAGCATTCGCTTTATTATCCTAAGTTAAAAATTTTCTATCTTTAAACATCAATTTCTAAAATCAACATGCGAATTAGTTAAATATTATAAAAATGTTTCTCATGGTGGATCTAAAAACAAAACGATGTTAAACCATATAAATTTTTAGAAACCCGGTAGTCAAAGATACAAATATTTATCTCTTCATTTAAGCCTTCAATGCATAAAGACTACAAATAGGAACAACTTATTTGAAAAAACTCAAATGTGAAATAGGTGTAACTTTTATCGATGGAGGGAGTAATTTAGAAAAGAGAGTACTGGTATCTGACACTTGCTCAAATTTAGAATATGTAGGACTACTTAGGGCATGTTCATATGTAGAGCTCATAAAAACTTTTAGATAATGTATGTTTATTTAGAGACTATCCTTACAATAGTGGAGATAACAAAGATTCTAAACCTTTAATCTATAAAAGTGTCCTTTTATTACTATTCTTTCCTTTTTCACACTCTCATGCAGCAAAGGTTGTGTTTCAGCGCGAAGTTTGGATTTTGGTTGAAATTGGAGATGATGTGACTGAAAAGTTGTGTGTGTATGACAGGTTGATGTGATGGAAAAGGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028951