BGIOSGA028954

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Revision as of 08:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028954| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028954, complete gene.| tag = OsI_297...")
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Gene Name

BGIOSGA028954

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028954, complete gene.

LocusTag

OsI_29794

Ensembl Transcript ID

BGIOSGA028954-TA

Ensembl Protein ID

BGIOSGA028954-PA

Length

7272

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26577830..26585101

Sequence Coding Region

26577830..26577979,26579267..26579367,26580506..26580884,26581605..26582450,26582651..26582738
,26583043..26583135,26583317..26583384,26583460..26583566,26584362..26584449
,26584844..26585101

Genome Context

<gbrowseImage1> name=IndicaChromosome08:26577830..26585101 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:26577830..26585101 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGGAGGATGCCGCCGGCGGCGGCGGCGACGGAGGCCGGTACTTCAAGGCCGACCTCACCGGCGCCGGCGTCGTCCAGCTCAGCGAGCGCGTGCGGGAGAAGCTGCGGGAGTTCGTGGACGACTACACCAACAACACCCTCGTGGAGTACGTCATTTTGTTGCTCGAAGGTGGAAAGCGCAAAGATGAGGCCATCAAGGAGCTTGATGTATTTCTGGGAAAGGATAGTCGCGCCTTTATTTCCTGGTTGTGGGATCATTTATCTGTAAATTTGCACCTTTATGTGCAAACACAAGAACAACTGCAGGTGGATAATAAGGATGACGAAGCCCCAAATGAACTACCTGGAGAACAGAAATCGTCAGAGTTGCAGTTGAGAAGCAAAGATCAAACTCATCCTGAGTGTGTAAGTGAACCCAGTACAACCAGAAGTCGGACTAAAAGGGATTGGAAAGGAATTGGTCGGGAGGGTAATGAAAACTTTCCACTTAGAAGTGTACTGAAGGATATTTTGCATGGTGAGGAGAAAAGGTCGCAAAAGGTTAATGAAATACGACATCCCCCATCGTCTAATCAACGGAATGGCAGAAAGCGTGACAGGGATGACGAACCGCAACAAATAAAGAGAGACTTGCCTTTGCGCCGTGACGTTGGTGCCTCCTGCCGTCTTCTAAAGTTTGCTGTTCGAGATGCTGTGAAAGCTGTACAGCAAACCAGCAGCTCTACGGAACCATCTTCTAAGCGCCTACGTTCTGTGGTTTCCACATCATCTGCAGACAGCCTGCATGGTAAAAGAATAGAAACATCTACAGAGGGCCACCTGTATGACAAAAAGCCAGAAAGAACTAGGCAAATTCTTCAAGTACCTGGAGCTGCTTTAGCTCTCAGAGCTGCCGCAGAGGCTGCTGCAGATTCTACCAAAGTTAGATCTACTGGAAGCGTGTTTAGTCGATTAGGCCAAGGGAATGCTGTGAATCAGACACCCCGTTCTCGTGAACAGCAGAGAGATTACGAAGATTTCAAACCAGCTACAACTGCAGATGATCATGATTCTGATCGATACGATAATGATGATGAGATATCCGGAGACATAACATTAGAAGATGGGGAAGCTGAAATGAATGTTGATTCTACATCTGATGATGATGTTAGCAGAGATGATGGAATCACTAGATATGGAAGTTCCGATTCACAAGTAGCTGCTTACCCTTCAGTTGTGGAGAAGAAAGATGTTTTCGTGAAATGCAGTGTTGAACCAGAGACCAGTACAATGAGGCATTCAAACTTGATTAAGGAGGAGCAACCAGGTTCTTTGTCAGTAATAAGTATGAGCAAAACTGTGGTTGTCCCAGTTAATGCCAACAATCTGGAACCTTCCAATTATGAGACACCAAAAGATGTTCATGTTGTAGAGAAAACGGACATTACACCCATGAATGCTACTGTTACCTCTCTGACTAGTAATATCAAAATGAGAAGCAAGGCTGACAGATCGTCGAGTGAAAACACATTATTAAATGATTTGTCACTACTTTCCTCTATTGGATTGAACTGGGTTGGTAGATTTTATCTGACTGTTGAGAAAACCACTCAGGAACTAGCTCATGGAGAAGTCCAAAAGGATTCACAGCGATCTGCAATTGCATCATCTGTTACGAGTTCATATAGCACTGCACACCCAACTGAGGACGCAGACTCTAGAACCCTCTATGTTAGCAATGTTCATTTTGGTGCCACCAAGGACGCGCTATCTCGCCATTTCAACAAGTTTGGTGCGGTGCTCAAAGTAGTTATTGTTACTAATGCAGCAACAGGGCAGCCAACAGGATCTGCTTACGTAGAATTTTTACATAAAGAATCAGCTGAACGTGCTCTTTCATTGAATGGAACATCATTCATGGCACGCATCCTCAAGGTTGTCAGGCGAAGTTCTCATGAAGCTGCACATTTTTATGGTTGGCCTGGTGGTGGGCGAACATCAATGTATGCCAGGCATGGTAGAATGGCATACCCAAGGGGTGGCCTCCCTGGTAGCACCTTCAGAGGGCGTGCTCCAATGATAGCTGGTGCTAGAAGTTTACAATGGAAACGGGAGCCTTCAGTTACTGATTCAAATACAGGTGCAACCGTGGCACTGCCTTCTGCTGAACAGGTGCTTCCTCCTGCCACATAG</cdnaseq>

Protein Sequence

<aaseq>MEAEDAAGGGGDGGRYFKADLTGAGVVQLSERVREKLREFVDDYTNNTLVEYVILLLEGGKRKDEAIKELDVFLGKDSRAFISWLWDHLSVNLHLYVQTQEQLQVDNKDDEAPNELPGEQKSSELQLRSKDQTHPECVSEPSTTRSRTKRDWKGIGREGNENFPLRSVLKDILHGEEKRSQKVNEIRHPPSSNQRNGRKRDRDDEPQQIKRDLPLRRDVGASCRLLKFAVRDAVKAVQQTSSSTEPSSKRLRSVVSTSSADSLHGKRIETSTEGHLYDKKPERTRQILQVPGAALALRAAAEAAADSTKVRSTGSVFSRLGQGNAVNQTPRSREQQRDYEDFKPATTADDHDSDRYDNDDEISGDITLEDGEAEMNVDSTSDDDVSRDDGITRYGSSDSQVAAYPSVVEKKDVFVKCSVEPETSTMRHSNLIKEEQPGSLSVISMSKTVVVPVNANNLEPSNYETPKDVHVVEKTDITPMNATVTSLTSNIKMRSKADRSSSENTLLNDLSLLSSIGLNWVGRFYLTVEKTTQELAHGEVQKDSQRSAIASSVTSSYSTAHPTEDADSRTLYVSNVHFGATKDALSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAERALSLNGTSFMARILKVVRRSSHEAAHFYGWPGGGRTSMYARHGRMAYPRGGLPGSTFRGRAPMIAGARSLQWKREPSVTDSNTGATVALPSAEQVLPPAT</aaseq>

Gene Sequence

<dnaseqindica>1..150#1438..1538#2677..3055#3776..4621#4822..4909#5214..5306#5488..5555#5631..5737#6533..6620#7015..7272#ATGGAGGCGGAGGATGCCGCCGGCGGCGGCGGCGACGGAGGCCGGTACTTCAAGGCCGACCTCACCGGCGCCGGCGTCGTCCAGCTCAGCGAGCGCGTGCGGGAGAAGCTGCGGGAGTTCGTGGACGACTACACCAACAACACCCTCGTGGTACGACGCCGCCGCCACCGTTCTCTTCCCTTCCCTCCTCTCGCGCATCGTTGGCGCTCCGCTCGGTGTGCGGGCAGTGTAGTGACGCCGTTCGTTTGTGGTTTGGATTATATGCTTGCAACTTCGGGATTTTAGTCTAGTTTTGAGCGCCTTTTGTAGTGGTATGCCGCGGTTTGTGTGAGATATATGCCTGTGCGGAGGAGCTAAAATTTTGCTAAACTTTCATGTAACCTAGCCCGAATTATGCCGCTGCGCGCTGTGTTTAATGTTTGGTCCTCTGCTGTTAGTGTAATCACTCATAATTGCCGTAAGATCCCGTCTTCTTTAAATATGTTGGGTGTGTTCGCTTCCTGGAGGTTTGGTTTGGTTGGAACGAAATGTTGTTTATTTGCTCTAATGTAGTTGGGTTGGAACGGAATGTTTTTTATTTGCTCTAATGTAGTGCCCCTGTATACTGCTGTGCTTCGTTTAATTGAATCCAGTCGGTCTAATGGTGCCAGAAGCACTAGAATATTGTGTAGTTACCTGAAACATGTCCCAAAAAAAAAATTCTAAAATGGGAGCATAATGTACTGCCGCTCCATTGCTTTTCTTAGGAGATTCTTTTCGCGAGGTGATCACTGATTAGATGCTAGGAGCCTAGAAATTCTTAAAGTTCCTTTTTTATTTTTGCCATGTATGGATGGATATTTTGGTCTAATCTAGTTAAGTTTATTTATTTAATACTAGGTTAGGAGATCGATATCTCCTTTCAAGAACATGATCATGCAGTGTAGCAACAAAGATTACATTATCTCATACTTGACTTGTGATTAGTCAAGTTCCCATGGGTGCTTTCCATTTTAGTTCTTATTAACACGCCATTTATTTTCTATTTCCCTTTCCCCATCCATCACCAAATTTTCTTAACCAGATTTGCTATTTTGACCTCATCTTCTTGGGCACAACACTTTACTATCCAAAGGTGACCAAACTGTGATAAGATTGCTGCATCTCCTCATTGTGGTTATAGCATTTATGCAGGAATCTGCTGCTAGGTTTTCCTCTACCTTTAATTAATGACACCATTTTTAATCATCGTGGGTAGAATTGACATATTCTGTCTGAGGAAGCATCCTGCAATGGCATGGAATACATTGCTTTCAGCACATTGTATTGCCTTGAATTCATTTTATTCATTTTCTTACACACTAGAATGCTAAATACCATCCTTTACCTTTTCTATGTTACACTGAAATGCTCCTAGAGAAAGCAATAAGTGTACCTCTGTTGTTGTTTTAAGTGCAGGAGTACGTCATTTTGTTGCTCGAAGGTGGAAAGCGCAAAGATGAGGCCATCAAGGAGCTTGATGTATTTCTGGGAAAGGATAGTCGCGCCTTTATTTCCTGGTTAGTTCACATGTCATATAGATTGAATTCTTAATTTTTTGGCATCAACTATGTTGTTAAACCAACCTTTAATATATTTTTGCATTTGTGCACAGCGTTCTCTATATTTTTGAACTAATGCATGCCTAGCAATTTACTCCTAGACTATGCAATTTACTCCTTTGGTACTTAGGCAAATTGATGTTTTGCATACATTTAACCATCAAAAGCATTTATAACATCTGGTTAGAGGGGCGTATGAAAATATGCCACATCCCATGGAGTATAATTTTCCTGCTAAAAGTAACCCTGCAGCATGGCTAGGCGCATCCATCCACATAAGCAAAGACATCCATGCCGATATGGTTGGGCTGCTGCATGACCCAACTAAATCACATTATGGGTTTAGGCCACGCTCTTTTTTAGAGGATGAATTTAGCTGAGTAGCTGCACGCAAAATGAGAAATGTGATTAGTATATGATTAATTGTGTATTGATTATAAAAAAATTGAAAAATAAATTTATTTCATTTTTGAAAGCACGTTCTATATAGAATTTTTGAAAGCACACTATTTAGCAGTTTGAAAAGCGTGCTAATGGGAACGAGGCGTAGATAAGCTCAAATAGCACTTTAGAAAAGGCCCTTAGATAAACTTGTTTGGAAGTACATGGATCAAGATCAACCATCTGCAAGTTCAAGAACTTGCCATGTAACTCACTCTTTAATCAAATCGCAAATCATTTGTGACTGAGCATTGGAAAAGAATTAAAAAAAATGTTTTTGATCTTTGCATTGGTTTTTTAAATAAATTTTGCTACTTTACCATTCGTGTGAAGTGGAGAGGTTGACTGTAGTAAAAACGAAAAACACTTTTTACCTGGATTATTTCTGTATATAATTTGCAAGGACTACAATATATTATAATTACTTGTTAAACCTGAAACTGGTTTGTATCTACTGATTAATTTAGCCTTTGTCATTTGCCCATACAAGCAGTTCAGGTTACAGAGACTGTTTCTTGCCTGAATCCATCATTTCTTGTGCATACTTCTCATACCACTTCAACAAAATATCCAGTCCAGAACAATAAACAATCCTTGCTTATTTACATGCATATTACTTTATCAAGTGTAACTGAATACCATGTCTTTCATGTAGGTTGTGGGATCATTTATCTGTAAATTTGCACCTTTATGTGCAAACACAAGAACAACTGCAGGTGGATAATAAGGATGACGAAGCCCCAAATGAACTACCTGGAGAACAGAAATCGTCAGAGTTGCAGTTGAGAAGCAAAGATCAAACTCATCCTGAGTGTGTAAGTGAACCCAGTACAACCAGAAGTCGGACTAAAAGGGATTGGAAAGGAATTGGTCGGGAGGGTAATGAAAACTTTCCACTTAGAAGTGTACTGAAGGATATTTTGCATGGTGAGGAGAAAAGGTCGCAAAAGGTTAATGAAATACGACATCCCCCATCGTCTAATCAACGGAATGGCAGAAAGCGTGACAGGGATGACGAACCGCAACAAATAAAGGTGTGTGATGTGATAATAGGAGATGCATAATGCTTGTGTTAACCAAATGGATTGACTGAAACACTCTGCTGTCTTGCATACTTTTTTAATGATTCACTTTTTCATTAACTTGCTTTGTGTTGCAGCTAAACATTTAATTGTTTATACTTCTCTAAATTGTGCAATGGAAGATTCCTTTTAACACACTAAATATGAACTTTTATAGCATCAGCACAGGATTATAAGAGGATAGTATCATGTTAGTTGTTAAAATGAAGGTGCACTGCGATTTTCCACATTCCCTATTTGAACTATACACTACATTGCAACAAACGTTCTTTGCAACTGATGAATTAACAATTTTTCATCTCATGAATATGCATATGTGGGCTCTAGCTGTTTGTGTTTTCTGCAATACTTCGCAATTAGAATGAACAACTAGCTGATCTAGTTATTTTTTCATGTTTCTAAGTGTTGGGGAAATCACCAAATAGCCAATACAGTCTATGTATGTACTATCTACCTGAAATATTGTTGGTTTTCTGCTCTAAAATTTTCATAAGGGAATGTTAGACTGCAGTTTAGTTCAGCCCCTCAATTTTCGGTACGACTGGAAGCATTCATTCTTAATGTCTCTACTGGAGACAATGTTTTCTTTAGCCTTTCATTTTCATTGTTTAAAATTAATTATGCAAAATTCAAAACATGTCATTTACCAACAATTCTTTTCTTTATTGCCAGAGAGACTTGCCTTTGCGCCGTGACGTTGGTGCCTCCTGCCGTCTTCTAAAGTTTGCTGTTCGAGATGCTGTGAAAGCTGTACAGCAAACCAGCAGCTCTACGGAACCATCTTCTAAGCGCCTACGTTCTGTGGTTTCCACATCATCTGCAGACAGCCTGCATGGTAAAAGAATAGAAACATCTACAGAGGGCCACCTGTATGACAAAAAGCCAGAAAGAACTAGGCAAATTCTTCAAGTACCTGGAGCTGCTTTAGCTCTCAGAGCTGCCGCAGAGGCTGCTGCAGATTCTACCAAAGTTAGATCTACTGGAAGCGTGTTTAGTCGATTAGGCCAAGGGAATGCTGTGAATCAGACACCCCGTTCTCGTGAACAGCAGAGAGATTACGAAGATTTCAAACCAGCTACAACTGCAGATGATCATGATTCTGATCGATACGATAATGATGATGAGATATCCGGAGACATAACATTAGAAGATGGGGAAGCTGAAATGAATGTTGATTCTACATCTGATGATGATGTTAGCAGAGATGATGGAATCACTAGATATGGAAGTTCCGATTCACAAGTAGCTGCTTACCCTTCAGTTGTGGAGAAGAAAGATGTTTTCGTGAAATGCAGTGTTGAACCAGAGACCAGTACAATGAGGCATTCAAACTTGATTAAGGAGGAGCAACCAGGTTCTTTGTCAGTAATAAGTATGAGCAAAACTGTGGTTGTCCCAGTTAATGCCAACAATCTGGAACCTTCCAATTATGAGACACCAAAAGATGTTCATGTTGTAGAGAAAACGGACATTACACCCATGAATGCTACTGTTACCTCTCTGACTAGTAATATCAAAGTAAGTAGCTTCATATTTTAAACCAATCAAATTTTATTAGTAACTGCTTAGTAACTGCACTATGTTTACCATTTCTGCATACCCACTCTGATTATTTTGCTTAAAGTTTTACTTCTATTTTTAAAAAAGTATCATCTAAGTAAGTATATTGGATATTTGCATGTGATAACTATCGCTGATTTCCCATTTGACTGGAATAGATGAGAAGCAAGGCTGACAGATCGTCGAGTGAAAACACATTATTAAATGATTTGTCACTACTTTCCTCTATTGGATTGAACTGGGTTGGTTAGTGGTTTGCAGGATTAGTTTATTGTGCTTTTATCTCTTCATGGCCAGCTGAAAAGGCCGATGCAGATTGGTTCACATCAATAATGCTTGGAATGAGAAACCTATAGCTACTTCACTTGCATGTTCCATTGATTCAGACTACTTACTGTATTAGCTTGCTTCTATATTTTGTTAATACACAGGAAATATTTTACATTCTTTAGCTGTTACTTATGCCTAATTACTGAGTAATTGTTTGTTCCATTTGGTCACATTCCTTGTATTTAGCTCCAATGCTTTAAAATTATTTAGGAATCTTCAGGTAGATTTTATCTGACTGTTGAGAAAACCACTCAGGAACTAGCTCATGGAGAAGTCCAAAAGGATTCACAGCGATCTGCAATTGCATCATCTGGTATGTGACATAACTCAAAATCATTTTAGCATTTAAAATTGTTTAATTCAAAAGTCAAAGCATAATGCTGAACTAGCACTCTGATGTAAATTCCCATCAGAAACAATCATCAGGACGGAATGTTTCACCTTATCTCACTATTGTTTATTGCACAATATAATATATCTGTCCTTCCTTGCAGTTACGAGTTCATATAGCACTGCACACCCAACTGAGGACGCAGACTCTAGAACCCTCTATGTTAGCAATGTTGGTATCTATGTCTTCTCATCACACATGGTTTCTTGTCCTATATTCTTATACCTTTGTCAATTTTATTTGAAGGTTCATTTTGGTGCCACCAAGGACGCGCTATCTCGCCATTTCAACAAGTTTGGTGCGGTGCTCAAAGTAGTTATTGTTACTAATGCAGCAACAGGGCAGCCAACAGGGTACTCTTTCATATGCTAATTTTGCTGAGAAGATTTTTTTTGCTGTTTTTTTTATCTTATATACGTAAATGCCATGCAATATCATGGTGGTTTTTGAGATGTTGAGTGATGGAACATGTCTAGTGCAAATCAGCCATTAGGTGCTATTGTGCTTATATCTTCAACTTTGAAGTCAACTTCACATGGTCTAAAAAACTTGAGTTATATCTCTCTTCATTTAACATGAAACTTAAACTTCAGATGCAACTAGGAACAACCTTATATCTGTACCGTCAGTAGAGCTTGGACTGATTTCATATGGTGTTAAATCTCACCCAGGAGTACCTTTGGCTTGGTATTCAAATCAAAAGGTTTTTACATGTAGAACTCACAGATTGGTGATAGCAGTTTATATGTCATATATCTCCATAGGAAAAATTGTGAATACTACATCCGGCCCAAAAAATAAGCTTCTGGCTTTAATCGTTTTATGCAAACTGAGGAAAATATTTTGAGTAAATATAAATGGCATCGCAGGCATTAAACTTGCGTCGTGTTTCATTAGATTTATGATATTTAGAACTCAATACTTATGCAATTTTCTTATCATTGCTCGAAAACTATGTTGCTCTGGTCATAACTGAGTGAATTACTCTTGCAAGTTTAAGAATCTAAATGCCATGCTTTCAACACATAAGTTTAACATCCTTGCAAGTTAATGAAGTAGGCTACAATAAATTAGCTATACTTAAAATCTGAAGTCGGCCATTCTCATCTCCTAAATAGAACTCATGCCTTTTTTTTTATCCGATACAGATCTGCTTACGTAGAATTTTTACATAAAGAATCAGCTGAACGTGCTCTTTCATTGAATGGAACATCATTCATGGCACGCATCCTCAAGGTACTATGGTCAATGACCAAGCTTTGTCCTTTTACTTTCTACTCCCTCCATCCCAAAATATTGTAACCTGGTACTGGATTATTGGACACAACTTAGAACTACAAATCTGGATAGAGCCCATGTCCAGATTCGTAATACTAGGTTGTGTCTAATCTAGTACTTAGGTAGCTATATTTTGGGACGGAGGGAGTATCTCTCTCTACTGAAAGGGGAGTTTGAATATAGAGCACAATCCTCCTAACCAAATTCAGAGCTCATCCACCTTATGTTTCTGAATTAGTATTCCGTGAAACTGTTGCACAAAAGGAACTTGCTATCACTCTATTGCTTTACTGGTTGATATATTGGGTTGCCTTGGAGCTGGTGATATTTCATTTGTTTTTCCCTTGTACAGGTTGTCAGGCGAAGTTCTCATGAAGCTGCACATTTTTATGGTTGGCCTGGTGGTGGGCGAACATCAATGTATGCCAGGCATGGTAGAATGGCATACCCAAGGGGTGGCCTCCCTGGTAGCACCTTCAGAGGGCGTGCTCCAATGATAGCTGGTGCTAGAAGTTTACAATGGAAACGGGAGCCTTCAGTTACTGATTCAAATACAGGTGCAACCGTGGCACTGCCTTCTGCTGAACAGGTGCTTCCTCCTGCCACATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028954

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028954&oldid=35211"