BGIOSGA028961

From RiceWiki
Revision as of 08:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028961| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028961, complete gene.| tag = OsI_298...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028961

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028961, complete gene.

LocusTag

OsI_29806

Ensembl Transcript ID

BGIOSGA028961-TA

Ensembl Protein ID

BGIOSGA028961-PA

Length

4086

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26689946..26694031

Sequence Coding Region

26689946..26691255,26692399..26693010,26694028..26694031

Genome Context

<gbrowseImage1> name=IndicaChromosome08:26689946..26694031 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:26689946..26694031 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGATGATTTATTTTCAGGGTTGGTATGGTTTTGGGAGGACCGGGGTCCTTAGATCCATAGCAGAAGTTCTTCCATCCATGAAACCTTATCCCCCAGAATTACGCTTCGACAGGACTATATACATAGATTGCTCAAGGTGGAAAAGCAAAAGGGTGATGCAAAGAAAAATAGCAGAGGAGCTAAAACTTGACAATGAGACCATGGCATCGTTTGATAAGCAGGATGAGGAGGATGACTTCAGTGGAGTGGACATTTGCTCTAGGGATGCCATACTAAATGTTTCAGCAGCGATTAGCAGGATACTGAGCCAGAGCAGATTTCTGATGGTTTTTCTTAACGGGAGTGATGATGAGATCCCCCTAAGCACATTTGGTATTGCAGACTATTTTGACTGCGTAGTAATATGGACTTGGAGTAGAATGTTCCTTACCGTGATGGATGTTTCCTATTTACATAGTATTTACAGGAAAATAAAGGAAGGCAGATACACAGATCTTTTCATATATGGCTACCAGGATGCTGATAAATTCTCAAGTTCAGAGTTCGGTGCACTGTTTCGTGAAGAGGCTGCTACCATAGGTCGCTGCCCATGTCTGCAGAACATCGACCTGGAAATAGTTGCAGATTGTTGTCTCTATGGGTTTCTCATGTATTATCACAATAAACAAAACACCAATGAATTTGTTTGGCCAGCTCATGCGTCCAACTATTGGACGTGCGATGGGATCATCCAAGGGGCTAGAGCATTGGAGGTCAGTAATGCATTGCATCCAGAAGTAAGTTTCGAGTGTCGTTCTTATGAGTTGAAAAGGGTGGTTGAAATGTTGAAGATGGATCCGAAGGCCCCTTTCCTATTACTGGAAGACGACAATAAGTTTGTCTATTCAAATTCAAACAGGCCTTACCGTTGGGTTTTTGCCATCTCAAATGATACCATAGAGGAGGCTATGCAAACTAAAATGGCAAGTGCATCATCAATCTTCTTAGCAACTCAAATGTACAGTGGTGGCCTCCTTGGAATACCAGATGGTTTTTTTGAACAGTGCAGTAGCCTCTGCGTGCTGGTTCTCTCCTGTTGTGCCTTCAACTTTGTATCGCCTCCTTTCCTCCATTGCCAAACGTTAAAATTCATTGGATTAGATCGCTGTAAGAGCAACAGTACAGTTGAACTTCAAGGAAAGTGGGCATGTCTGCAAAACTTGAGGGTGATTGACCTACGCTACACGGACTGGGTTGAGATTTTCCACGAGGAAAAGATGGAGCTCATGACTAACCAGCTGATGGAGGTAAACATAGAGGGAGTTAGGTGGTGCCGCGTGGAGAGGTCCTCCAACCTAGACGTCGTCTTTCCTCAGGGTGCAGATGAGGACGGTCGCCTGGAGATCATCTGGGCATCGGACCTCCTCAAGGCCCACTGCATATGGAGCAGAGGCATCAAGTCCTCAGATGGTTACTTGCAAAGTCTACAGCACTTGCACCTGCGCTCCTGCCCAAGCCTCCGGTTTGCGCTTCCAATGGCGCTCCCCTCCTTCCCCAGCTTGGAAACCCTCCACATCATCCACTGCGGCGACCTCAGGCACATCTTTGTACCGGACACGGAGTTCCAGTCGACAAGTATCGAGTTCCCAAAACTGACCACCATCCACCTACACGACTTGCCGTCACTGCGGCAGATATGCGAGGCCGTCGAGATGGTGGCGCCCGCGCTGGAGACCATCAGGATCAGAGGATGCTGGAGCCTCCGCCGTCTGCCCCGCAGTCAGGGCAAGCAGAAGCCGGCCATCGAGGTGGAGAAGGATGTGTGGGACGCGCTGGAGTGGGACGGGGTGGACGCCGGCCACCACCCTTCCCTCTACCAGCCGCCCCAGCATTCGCGCTACTACAAGAACAAGCGCATGCCCAGGGGCACCCTCCTCGGGTGA</cdnaseq>

Protein Sequence

<aaseq>MTMIYFQGWYGFGRTGVLRSIAEVLPSMKPYPPELRFDRTIYIDCSRWKSKRVMQRKIAEELKLDNETMASFDKQDEEDDFSGVDICSRDAILNVSAAISRILSQSRFLMVFLNGSDDEIPLSTFGIADYFDCVVIWTWSRMFLTVMDVSYLHSIYRKIKEGRYTDLFIYGYQDADKFSSSEFGALFREEAATIGRCPCLQNIDLEIVADCCLYGFLMYYHNKQNTNEFVWPAHASNYWTCDGIIQGARALEVSNALHPEVSFECRSYELKRVVEMLKMDPKAPFLLLEDDNKFVYSNSNRPYRWVFAISNDTIEEAMQTKMASASSIFLATQMYSGGLLGIPDGFFEQCSSLCVLVLSCCAFNFVSPPFLHCQTLKFIGLDRCKSNSTVELQGKWACLQNLRVIDLRYTDWVEIFHEEKMELMTNQLMEVNIEGVRWCRVERSSNLDVVFPQGADEDGRLEIIWASDLLKAHCIWSRGIKSSDGYLQSLQHLHLRSCPSLRFALPMALPSFPSLETLHIIHCGDLRHIFVPDTEFQSTSIEFPKLTTIHLHDLPSLRQICEAVEMVAPALETIRIRGCWSLRRLPRSQGKQKPAIEVEKDVWDALEWDGVDAGHHPSLYQPPQHSRYYKNKRMPRGTLLG</aaseq>

Gene Sequence

<dnaseqindica>1..1310#2454..3065#4083..4086#ATGACGATGATTTATTTTCAGGGTTGGTATGGTTTTGGGAGGACCGGGGTCCTTAGATCCATAGCAGAAGTTCTTCCATCCATGAAACCTTATCCCCCAGAATTACGCTTCGACAGGACTATATACATAGATTGCTCAAGGTGGAAAAGCAAAAGGGTGATGCAAAGAAAAATAGCAGAGGAGCTAAAACTTGACAATGAGACCATGGCATCGTTTGATAAGCAGGATGAGGAGGATGACTTCAGTGGAGTGGACATTTGCTCTAGGGATGCCATACTAAATGTTTCAGCAGCGATTAGCAGGATACTGAGCCAGAGCAGATTTCTGATGGTTTTTCTTAACGGGAGTGATGATGAGATCCCCCTAAGCACATTTGGTATTGCAGACTATTTTGACTGCGTAGTAATATGGACTTGGAGTAGAATGTTCCTTACCGTGATGGATGTTTCCTATTTACATAGTATTTACAGGAAAATAAAGGAAGGCAGATACACAGATCTTTTCATATATGGCTACCAGGATGCTGATAAATTCTCAAGTTCAGAGTTCGGTGCACTGTTTCGTGAAGAGGCTGCTACCATAGGTCGCTGCCCATGTCTGCAGAACATCGACCTGGAAATAGTTGCAGATTGTTGTCTCTATGGGTTTCTCATGTATTATCACAATAAACAAAACACCAATGAATTTGTTTGGCCAGCTCATGCGTCCAACTATTGGACGTGCGATGGGATCATCCAAGGGGCTAGAGCATTGGAGGTCAGTAATGCATTGCATCCAGAAGTAAGTTTCGAGTGTCGTTCTTATGAGTTGAAAAGGGTGGTTGAAATGTTGAAGATGGATCCGAAGGCCCCTTTCCTATTACTGGAAGACGACAATAAGTTTGTCTATTCAAATTCAAACAGGCCTTACCGTTGGGTTTTTGCCATCTCAAATGATACCATAGAGGAGGCTATGCAAACTAAAATGGCAAGTGCATCATCAATCTTCTTAGCAACTCAAATGTACAGTGGTGGCCTCCTTGGAATACCAGATGGTTTTTTTGAACAGTGCAGTAGCCTCTGCGTGCTGGTTCTCTCCTGTTGTGCCTTCAACTTTGTATCGCCTCCTTTCCTCCATTGCCAAACGTTAAAATTCATTGGATTAGATCGCTGTAAGAGCAACAGTACAGTTGAACTTCAAGGAAAGTGGGCATGTCTGCAAAACTTGAGGGTGATTGACCTACGCTACACGGACTGGGTTGAGATTTTCCACGAGGAAAAGATGGAGCTCATGACTAACCAGCTGATGGAGGTAAACATAGAGGGAGTTAGGTGCTCGCAGCTAACAAGTCAGTTAAAGAAAAGATTACCATGCCTTGAGAGGCTCCGGATAATCAACCTCAGAATGAGGCTGAGACATCATCATCATCAACTGACATCAACGACATATTCGTAGACAAACGGATCTGCAATTGCTTGATTTGTCTGGCAACAAAGAGATGAAAAATCTGCCAACAAGCATATCCAATGCAGGCCAACTTAAGGTTCTTATTCTTGACGGTTGTGACGCGCTGGAGGATGTTGTTGTGCCTAATAGGCTTCCATCATCGCTAAGGTCATTCAGCTTTGATGGCTATGGATCTGCAGCGCCCAGTCGGGCATCAACTATTGAGCTACCTCTACAGAGCTGCCGTCCTGTTCGGCGTGGTATGATTCGTATGAAGGATGTGAAAACATCCGTGATATCCCTAGAAGGCTGCACGCAGCTGGACAATCTGTTCTTGCGTGGCCTGCCCAACTTGGTGGAGCGGGACCTTTCAGGCTGTGCAATCAAGGTGCTCGACTTTGGAACTATGGTGACGGATGTCCCATGTCTCAAGCGGCTATTTCTGCTAGGCTGTGAGCACCTTCGTGCAATAAGATGGGGACGGTCAAGGTTGCTGGAGTTGCTCTGTATAGACACACGTCCTGCCCGGAAGGTACTTGGATGTGCTCGGCCATCCCTTGCCGTCGACCATAAATACTTCCGGTTACAGGTGCATGCTTGTATTGTGGATGCTAGGCTCGCTCGGTCCTTACTGGCTACGATCAATTACTATTATTATTTCAACATCAGTATCACCTCTTCAATGGCATCCAGTAGCGGAGTTGTGCAACCAGAAGAAACAAGCAAGAAGATGACTGAACCCAGTGGTCAGAAACACTGCGGTGTAGCAGGCATCTATGGTGATGTATTTAGCAAGGTCGGCGATGCCGTAACCACAATGGAGGCCTTCCCGCAGCCTCCGACCCAACAGCTGGATCGCCACATGGAGATTGGTGATGGAAGCCACAGCGTGGAGAGTGAAGTGAAGCAAGCCTATGATGAAAGCAACAAGTTAATTCAGCTAATGGTATCGTGCACGAGTCCCTGCATGTGCATGATGACTCGGCCTGCCGCCACGCCTTGGCTGCGGAAAATTGGTGTTACCTCAGGTGGTGCCGCGTGGAGAGGTCCTCCAACCTAGACGTCGTCTTTCCTCAGGGTGCAGATGAGGACGGTCGCCTGGAGATCATCTGGGCATCGGACCTCCTCAAGGCCCACTGCATATGGAGCAGAGGCATCAAGTCCTCAGATGGTTACTTGCAAAGTCTACAGCACTTGCACCTGCGCTCCTGCCCAAGCCTCCGGTTTGCGCTTCCAATGGCGCTCCCCTCCTTCCCCAGCTTGGAAACCCTCCACATCATCCACTGCGGCGACCTCAGGCACATCTTTGTACCGGACACGGAGTTCCAGTCGACAAGTATCGAGTTCCCAAAACTGACCACCATCCACCTACACGACTTGCCGTCACTGCGGCAGATATGCGAGGCCGTCGAGATGGTGGCGCCCGCGCTGGAGACCATCAGGATCAGAGGATGCTGGAGCCTCCGCCGTCTGCCCCGCAGTCAGGGCAAGCAGAAGCCGGCCATCGAGGTGGAGAAGGATGTGTGGGACGCGCTGGAGTGGGACGGGGTGGACGCCGGCCACCACCCTTCCCTCTACCAGCCGCCCCAGCATTCGCGCTACTACAAGAACAAGCGCATGCCCAGGGGCACCCTCCTCGGGTATGTTATCGAACCTACATATGCATGCATAGCTACATCGATCGATCTCTACATACATTGACGGATGAAATTATAACATACTACCTCCGTTTTTTAAGGGTGAATAGCCAAAGTGGTCCTCCAAGTTTCATCTTAGGCTCAGTTTAGTCCTTGATGTTTCAATCCATCCATATTAGTCCTTCAAGTTTTCATTTGAGTTCAAACTTATCCTTGAACCAACAATTCTCTTGATAAATGACACTTATACCCCCATCATTTACATATATAAGAGAAAAATTGCATGCTTGAATTTTTTTATAGATAATGCATAGTAAACTATATAAAATGAAAATAAATTATGTACTAGCAAAGTGTATACGATAGCAATTTCTTAAGTTTCATGTGCACATGTTGAAATAATAGGAAGTACATCTGCAATTTTTTTTATTCATCTTGGTTTTCTCTTTTCTAGTTATAGTTATATGCAATTAAGGGCAAAATGGATATTTCTAACAGAAATATTGACTAGAAATAGCCATATGGCATATTAAGTGGGTCCAAGGATGATTTCGAGCCAAAACAAATATTTAGAGGAGCTATGTGGACAAAATGAAACGTGAAGGACTAAATTGAGCCTTAGATGAAACTTGAGGGACTATATTAGCTATTCTCCCGTTTTTTAATAGATGACACCGTTGACTTTTTTTATATGCTTGACCATTCGTCTTATTCAAAAAAAATTACGTAATTATAATTTATTTTGTTATGAATTGTTTTATCACTCATAGTATTTTAAGTGTGATTTATATCTTATATATTTATAAAATGTTTTTAAATAAGACGAATGGTCAAACATGTGATAAAAAATCAACGGCGTCGTCTATTAAAAAACGGAGGGAGTATCTATATAGTATCTGCTACTGATTACTGCATCCGATTATTATACATCTGCTACTACTAAATAATTAAGGCAGCGGCTTACTGATTGCTCACTCTTGATTTCCGTTGCTTCTCATCATCTCCTCTCTGCATGCCCAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028961