Os11g0170200

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Revision as of 09:02, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0170200| Description = Protein of unknown function DUF869, plant family protein| Version = NM_001072390.1 GI:115484392 GeneID:4349893| Leng...")
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Gene Name

Os11g0170200

Description

Protein of unknown function DUF869, plant family protein

Version

NM_001072390.1 GI:115484392 GeneID:4349893

Length

6603 bp

Definition

Oryza sativa Japonica Group Os11g0170200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3372532..3379134

Sequence Coding Region

3372639..3372980,3373420..3375428,3375765..3376089,3376198..3376227

Expression

GEO Profiles:Os11g0170200

Genome Context

<gbrowseImage1> name=NC_008404:3372532..3379134 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3372532..3379134 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagagaggagggaggaattgcttctccgggcgaaaagcctattccgaatggtgcttccccaaatcatagccaatcacctaaaatttgctcaagaattacagataatgagactcaaggaactgcaacagcaaaatctttaaatgaaaagctagtgttggaaactgtgtcagatgattcttccacacagcattgtcagtcaccacagccagatgtcttcacaaatgtcaaagatgaagatatgcaagattctgtgaagagtttgagtgagaagcttgcttcagcccttttgactatcaatgctaaagatgacttggtgaagcagcatacaaaggttgcagaagaggctgttgcaggttgggaacaagctgaagctgaagttagtaccctgaagaggttactcgaagcttcaactcagaagaatgcctctttggatgatcaagtgaaccacctagatgatgctctcaaagaatgtgtcaggcagcttcgccaagctagggaagaacaagaggagaaaattcgtgatgcagttgctaagaagactcaagaattggattctcacaagtctgagctccagaaccatatttatgagctaaagcagcagctggaagccgctaaattagaagctgccactgtggctgtccagcatgatctgcaggataaacttcaggctgcagagaaggaaaacaagggcctgaagatcgagctgctcacgctagccaaggacttgaagagactgtcactggaaagagatctgagcaatgaagcagcagagacagcaagtaaacaacatttggaaagtgtgaaaaagattgcaagggttgaggcagaatgccgtaagctgcgccatctgacacgaagaacttccttggccaatgattctaggcctgcgcctaacaatgcttgcatggaatctctcactgatagccagtctgacagtggggagcgtatgctgactgttgacagtgaaatgagaaattctgattcatgggcctcggctctgatagccgaacttgatcagttcaagaacagtagtgccagctcaagagatgttgtaaacaatcatgttgagattgacctgatggatgatttccttgagatggaaaagctggctgcattgtctgaagtagaacgtgtaagctctagctttggaacagaaactgattctgaccaggctgtggctatagataaagcttcaaaagtcgaaactgaaacactaaagagccaggtcacagatttgcaggcaaaggttgaaaagcttgagactgagaaaagggatcttgaaatggcccttgcagaggctagagtccagcttgacgcgtcgtgtgatgccctgatggcagccaacaacaagttggcagaattacaaatgcagttcaacttggcaaatgagtctaaaattgctgctttgggacaagctgatcagttagatgctgagagaggatctttggcattgcagcttgagtcgaagtcaatagaagttgagaaacttcaggcagttgtggcttcgttggaagaaagtacagataagaaagagctggagtcacagttagagtcaacttctgtagagttagcggatctttgcaagacagtggcatccttgcaagagcagattgatgccgagagaactctgtctttgcagcacaaagcatatgcagacatggcagatgcagataaaaagtcactagaggcacaactgcagtccgcacatgcggatatcgggaaactgaggggatctattgaaacactggagagcgagttgcaaaaagagaaaaccatgtatgaagaacttgtggtccaaatggagtcaatgaagattgaatcagagaaaaaacttggcgtggaatctgccaaagaagcattggaggcacggctcctggtagtgaactcagaaattgcgaaactgcatggaacagtgaacgatctggagtgcgatgcagcaaaggagaaggcattttcttcggaactgaagatgcaactagaggcagtggaaggcatccgaaagatgttggagtctgagcttgagagttcacaccaggaaaccatgaagctccaggagaagatctcattgttggaagtaagacttaaggaccagactgcattgttggtagaattcactgccaaggccgaggatgcagcggtgggaaggaaggcaatggaaggccaacttgaaggagctaaactggaaatcacaaaacttacaaatagggtaagcttgctgcaaggtaagattgagcaggagaagctgctgtcagaggagtacgaagcaaaatgccgcaagttagaggctcagctgtcaagagacagtcgggaggcaaggctttggcgactggccaacacaaatggtgacctgaaggtcaagcaggataaagagctctccagtgctgctggaaaactcgtggagtgccagaagacgattgcgaacctcggtcgtcagctaaaatcgctgaccgatctcgacagtgtaacagccgagcctgaaaagctagagtctggggatgcacttctggactttagagaacccgatgttgaggtgccaccagcaggctttgcaaatggcctgtacgatttggatcttccaaagagcaatgggagctgcctgtcacccattcctcgtgttcagtcgtcttccacacattcgcaaacgtcagtgttctctggcggtttatcgtcgcttggtagctacaggaacaaaacaagaaagtga</cdnaseq>

Protein Sequence

<aaseq>MREEGGIASPGEKPIPNGASPNHSQSPKICSRITDNETQGTATA KSLNEKLVLETVSDDSSTQHCQSPQPDVFTNVKDEDMQDSVKSLSEKLASALLTINAK DDLVKQHTKVAEEAVAGWEQAEAEVSTLKRLLEASTQKNASLDDQVNHLDDALKECVR QLRQAREEQEEKIRDAVAKKTQELDSHKSELQNHIYELKQQLEAAKLEAATVAVQHDL QDKLQAAEKENKGLKIELLTLAKDLKRLSLERDLSNEAAETASKQHLESVKKIARVEA ECRKLRHLTRRTSLANDSRPAPNNACMESLTDSQSDSGERMLTVDSEMRNSDSWASAL IAELDQFKNSSASSRDVVNNHVEIDLMDDFLEMEKLAALSEVERVSSSFGTETDSDQA VAIDKASKVETETLKSQVTDLQAKVEKLETEKRDLEMALAEARVQLDASCDALMAANN KLAELQMQFNLANESKIAALGQADQLDAERGSLALQLESKSIEVEKLQAVVASLEEST DKKELESQLESTSVELADLCKTVASLQEQIDAERTLSLQHKAYADMADADKKSLEAQL QSAHADIGKLRGSIETLESELQKEKTMYEELVVQMESMKIESEKKLGVESAKEALEAR LLVVNSEIAKLHGTVNDLECDAAKEKAFSSELKMQLEAVEGIRKMLESELESSHQETM KLQEKISLLEVRLKDQTALLVEFTAKAEDAAVGRKAMEGQLEGAKLEITKLTNRVSLL QGKIEQEKLLSEEYEAKCRKLEAQLSRDSREARLWRLANTNGDLKVKQDKELSSAAGK LVECQKTIANLGRQLKSLTDLDSVTAEPEKLESGDALLDFREPDVEVPPAGFANGLYD LDLPKSNGSCLSPIPRVQSSSTHSQTSVFSGGLSSLGSYRNKTRK</aaseq>

Gene Sequence

<dnaseqindica>6155..6496#3707..5715#3046..3370#2908..2937#agtactagtactacaataatgacacattgaagagcagtagaagaggagaggagaggaggggaggcaagaacaccagcagctgaaagtgagtcctggtttgagctgcctgggcgggaaagagaggaggcgaaccgcgaagaagaagaagaagagaagagagaaaaaaggaagcaaaaaaggaggcggtttttggattcttgctgcgatttctacgcactcgaggctctcatctcgtcaaaagcagtggcctttttccctcctcctcctttcttgggcatggtgtcattcatggtgatgctgctgctctggtacagtaacctcctgcttttttacctcctgtgcttgcttctctctcatccttctccgcgtgtgttcgcttcgatctgtgattgattttgtgggcgaggtgagcaatgtgaatctgcggctgttcttccctctgatctttatcccaaataaactactaggagaaagggaaagagatagaatagtagtagcagtaaagacaaaaaaaaactgaactttggtctggtgttcacatggttcttgtggtggttttgctgttctccaggcgacgggtttaattcgggggttctcagaggtattaattgctccctgtttccccttcacctgcgccgattttctgaatctctcttctttgttccctttcctgtaggttttttgctctgtatcttgcgcactccacccgtcgtagacttgattttgatgagatttgattgcgggtgcagtttttccaaagattgaaaggggggagattttgatttgcgctgcaatccagtttacgcgcggtgctctcttcgtttttggtggtttcttaattgttctctctctcttttgtttttgcgttatgcgaagtgattttgatttcttggctcgttttgaggcctcggagttgggtaaaatcttctgctttggcatgcatttttgtagggttttaggtgctgccagatttggttttgaagttttaggagtatttactagccacattttgatctttgatgtgttcgtttgatgcaaagatttgtcttagaaaagggtaggatagggtttgtactttttacgtttgctaaaaaaaaaaactttgatattaccgtgctttgcagcaagcatatattatttttctcttggtttctggaatcgtactcaatgccttgttggattttgtgttccttggtatctttgttttgaagtgttcattaagttatagacattgtatattacagtggaaaatcggatcctgtgcattgctcacattttggtaattgcaacgttttaaagttttacttttacttccctaggacgattgtagttactgcctgttgctcagtttacaacattacattattaaggaatcccattagtaatatgcaatgtgatgtttattgatgagatttctctccattggtttgtgtttcagacttcagtgatccaaaccatgctttttgatggtggctggtagaccaagtgatcactattgatgctttgattgtctgatgaccggtggttgcaagatggatctccaagagttgactctggaggcacaagtttgaatgccctggttcgatgtcattgcactccggtgatcaggttcacctcaatagttaaattctgtctgaatgggatccatatctaagaaattttgaattcagttttgagaaaagaaattctgaattctgtttggctattcatctgcacttctgtactagaaacatcatgatttggtgatagtttaggtgtttgcgaattagacttggggaacaaacttttcttaagaaccaaagttgggatttctgattttaataaacataacggatgctgttgcctgttggcatctctagctgagatgtcattttttctgctttggacagatttatgacatgcaaatttgcaatttgatctgttgctgttgggccagccattacagggtcactcgtttgtcacacgcttgtcaatgaataaatttgtagaaatcagacatccagtaaccaatagcaatatagcatgccagttttaatatttggaaatagacttgagtagttaggtttgtacttgattcgtcctgattatatgattttgtaagagactactaagtacttccaaacatatggttacacaatctttaaatgcatcaaacaagatataaaggttcccaagacttctagcgggttctttattgggccccttttccctgatagggacaaatgggctttgagttaagcatgggttaatgttctacttcgtaagcaacataaccttgtcacaaatggttttattatgcttcatgtggtattgatgcattctttatgtagttaggtgcctggatgaagtgcaattgtaatttgtggattaacaaactaaggataatgttacgcaagtagtggcatttggacataatatttaaattgtaaatgaatgtagcacttaactgtcatgtaatatcttgttcttttattgctgtgtcgaggagcgatttgctcgctgaagttataagtgattctcaaattaataaattaatagctatctgacatggttctggagttttgcttcaaaggcttatgcctcaattttgttcctagatagttatattccagaatagcacactgcatatagaaagaaccaccattaacatctgttaccccctcagttttgcatggttaacttgaatgttttgatagtgctgatctctatagctctgttgaatgtttttgacttgcagttttccagaggatagaatgtaacatatagattttttttcagaatcctgtggtatctcattgttaaggaagttaattcttatgtaacaggtcacatgtttgatttccactttggtggcttgagagcatactctagttgtctgaatcaagttctctgaaagagagaccggagatgagagaggagggaggaattgcttctccggtacaatcattaaatctcttactttttctgtagactatttaaaatttgaaattatttgtaagtgcttgcggaaaatactctcattttttctgtgtctggcaaaaccagggcgaaaagcctattccgaatggtgcttccccaaatcatagccaatcacctaaaatttgctcaagaattacagataatgagactcaaggaactgcaacagcaaaatctttaaatgaaaagctagtgttggaaactgtgtcagatgattcttccacacagcattgtcagtcaccacagccagatgtcttcacaaatgtcaaagatgaagatatgcaagattctgtgaagagtttgagtgagaagcttgcttcagcccttttgactatcaatgctaaagatgacttggtgaagcagcatacaaaggttgcagaagaggctgttgcaggtaatctttcttttcactatgattttagacattttgcattattgtgatcccatgcatttattgagtctgtggcttcccttcattattcaaaattaattttatatgtgaggacatcaatagaactaagaaagaggaaactcattcaaatagttctttggcaaagttaaaatagtagtatcaaccaataattctgtttgtctgcacatgcgtgttagtgtgtgtggagtgagtgtgtcgtctgtctcctcagttgtaccttctcaagaaaatcatagttttatttattccaatatggaaccaaattcatattgaactttatttttgacttacttgtaggttgggaacaagctgaagctgaagttagtaccctgaagaggttactcgaagcttcaactcagaagaatgcctctttggatgatcaagtgaaccacctagatgatgctctcaaagaatgtgtcaggcagcttcgccaagctagggaagaacaagaggagaaaattcgtgatgcagttgctaagaagactcaagaattggattctcacaagtctgagctccagaaccatatttatgagctaaagcagcagctggaagccgctaaattagaagctgccactgtggctgtccagcatgatctgcaggataaacttcaggctgcagagaaggaaaacaagggcctgaagatcgagctgctcacgctagccaaggacttgaagagactgtcactggaaagagatctgagcaatgaagcagcagagacagcaagtaaacaacatttggaaagtgtgaaaaagattgcaagggttgaggcagaatgccgtaagctgcgccatctgacacgaagaacttccttggccaatgattctaggcctgcgcctaacaatgcttgcatggaatctctcactgatagccagtctgacagtggggagcgtatgctgactgttgacagtgaaatgagaaattctgattcatgggcctcggctctgatagccgaacttgatcagttcaagaacagtagtgccagctcaagagatgttgtaaacaatcatgttgagattgacctgatggatgatttccttgagatggaaaagctggctgcattgtctgaagtagaacgtgtaagctctagctttggaacagaaactgattctgaccaggctgtggctatagataaagcttcaaaagtcgaaactgaaacactaaagagccaggtcacagatttgcaggcaaaggttgaaaagcttgagactgagaaaagggatcttgaaatggcccttgcagaggctagagtccagcttgacgcgtcgtgtgatgccctgatggcagccaacaacaagttggcagaattacaaatgcagttcaacttggcaaatgagtctaaaattgctgctttgggacaagctgatcagttagatgctgagagaggatctttggcattgcagcttgagtcgaagtcaatagaagttgagaaacttcaggcagttgtggcttcgttggaagaaagtacagataagaaagagctggagtcacagttagagtcaacttctgtagagttagcggatctttgcaagacagtggcatccttgcaagagcagattgatgccgagagaactctgtctttgcagcacaaagcatatgcagacatggcagatgcagataaaaagtcactagaggcacaactgcagtccgcacatgcggatatcgggaaactgaggggatctattgaaacactggagagcgagttgcaaaaagagaaaaccatgtatgaagaacttgtggtccaaatggagtcaatgaagattgaatcagagaaaaaacttggcgtggaatctgccaaagaagcattggaggcacggctcctggtagtgaactcagaaattgcgaaactgcatggaacagtgaacgatctggagtgcgatgcagcaaaggagaaggcattttcttcggaactgaagatgcaactagaggcagtggaaggcatccgaaagatgttggagtctgagcttgagagttcacaccaggaaaccatgaagctccaggagaagatctcattgttggaagtaagacttaaggaccagactgcattgttggtagaattcactgccaaggccgaggatgcagcggtgggaaggaaggcaatggaaggccaacttgaaggagctaaactggaaatcacaaaacttacaaatagggtaagcttgctgcaaggtaagattgagcaggagaagctgctgtcagaggagtacgaagcaaaatgccgcaagttagaggctcagctgtcaagagacagtcgggaggcaaggctttggcgactggccaacacaaatggtgacctgaaggtcaagcaggtagtctttttatgctctctctgctgcatataaactggaaatttaaccacctcactgttataacactatagggcttaagagttgcaaacatcaggccaaaagtacaaggattctatctcctatggtccaatctacttgctagttgcttcgcttgaggttgtttggacatccaaatggccatttcttttgctaagtgtatgttataaaaattgctaaaatattgaacttgtaaactcttccagggacatctaactattggtatgtagttttgtggtccctagacacattctatagtgacatgtaaccgaatggatctagtactggtcaatgatctaagcacacccaaaggatttacatacctgtattttagtttgtgcctaaggtccaatcagacctgtcagttgagaagtttctattaacaattcatcttctgtaacaggataaagagctctccagtgctgctggaaaactcgtggagtgccagaagacgattgcgaacctcggtcgtcagctaaaatcgctgaccgatctcgacagtgtaacagccgagcctgaaaagctagagtctggggatgcacttctggactttagagaacccgatgttgaggtgccaccagcaggctttgcaaatggcctgtacgatttggatcttccaaagagcaatgggagctgcctgtcacccattcctcgtgttcagtcgtcttccacacattcgcaaacgtcagtgttctctggcggtttatcgtcgcttggtagctacaggaacaaaacaagaaagtgaaatctgatgaaaaagatttgtgcataaacttatttaacagttcgtggatgtttgtcagttgtcacctgatgcttagatcagtgtacatttacaggaaaatgatggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0170200, RefSeq:Os11g0170200