BGIOSGA028975

From RiceWiki
Revision as of 08:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028975| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028975, complete gene.| tag = OsI_298...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028975

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028975, complete gene.

LocusTag

OsI_29831

Ensembl Transcript ID

BGIOSGA028975-TA

Ensembl Protein ID

BGIOSGA028975-PA

Length

2908

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26967867..26970774

Sequence Coding Region

26967867..26968384,26968444..26969081,26970020..26970540,26970643..26970774

Genome Context

<gbrowseImage1> name=IndicaChromosome08:26967867..26970774 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:26967867..26970774 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTGAGTTGAGCGACATCATGGACGTTACTTTGGAAGAATTATCTGAAGAGCATCAACAGATGGTAAAGGCTGCTGCTGACCAATTCATTAAAAAATGTTTACTGTCCTTTGCCAAGAACAGGAGTGGTGCACCGTTTCTCAAGTCCGATCTGCCAAGAGTTCTCCTTCCTGGGCAATCTGATCTTACTGAAGAGGAAGAAAGGGAGAGATTTTCGGGCTTGTTATACAAAGCTTTGGGGGAAGCAATGACCAATCACAATGCTGCATTCTTGAACAGCTTTCGGCATATAATGATAAGCATTTTTGGTCAACATGTGGACAAATCCTTTGAGCAGATACATGGGCAATTGGGTGGCCCGACATACTTCAATGTTCAAGCACCAGTTCAGAAACCACATGGTAAAGGGAATGCTGATGAAACTGGCGCTTCTGGTACTAAAGATGCAAATGGTCAACCGATTCGGCAAGATCCTCAGCCTGCACTGCCGAAAACTCGTACATACGGTGATATAGCATTGCAGAGGGATTTATATGGGAATGGATACTCGGAGTTCCTGGACTACAATGCTATTGACGCTCTCCCGAATCCCGGGTATGTAGGTGCTGCAGGGATGCCCGCTGGAAGACCGGGGAGTCAAGACACCAATGTTGATCTCATGGTACAGAAGATGACCGATGTACTGCAAAATCAGTTCGGTCTGAAGCCCAAGAATCAGGGATACATGTACTCATCGCCTTTCCCAGAGTGGTATCAAAGGGTGTCGTTGCCGAATCGAGTCAAGATCCCCACAGAATTTACTAAATTTTCAGGGCAAGATGACACTAGTACTGTGGAACATATAGCACGGTATTTGATGCAGCTTGGAGAAGCTTCGGCAGATGAGGCCTTTAGAATCAGATACTTTCCTTTGTCGTTGACAGGTTCAGCATTCACATGGTTTGCCTCTTTGCCCGCTCAGTCAATTTGCACCTGGAAGGATCTGGAGCAGAAATTCCATGCTCATTACTATACCGGTAGTACAGAAAAGAAGTTGGTTGATCTAACCAGCTTGAGGCAAAGGAGTAATGAGACACCTACAGAGTTTCTCAGAAGATTCAGAGAGATTAAGGGCATGTGCTTCTCTCTGAACGTACCTGATGATCAGTTGGCCACCAGTGTCAAAACTAAACTCACAAGGGAGAGTGAGATTATCATTGTCAAGATAGGAGAACCAGAGGGGATTGGCAAAGCCTTTGAAGAAAAGTTCAAAAAGTTCACCGATGCTCTTATCTACAGAAACAGTAGAAGCAGCTTCTCCATAAGTTTGACAGCCTTTGGTGCTCTGGGCTTCCCCTTCCTGGTAATTGACCGAGGGGAAATGTCGGCTGTTAAGGTCAATGGAGACAATCTGGTGCATGTACAATTGCAGCCACATCTGGACGAACCACCAGGGACCATTGACGCAGGAAATTTTCTTGTTGGTGTGCATCTGATAAATGGTCTGATGGAGCATGTGATAGACACTTCCCAGGAGATATTTCCCGAGAGGGATAAGTGTGCCTGCAGCCAGGTCTTCGGCCATTACTATGTGATTCAGAGTTGGCTCATTGGCTTTACCACAGAAAACAAATCTGCACAGCCACATATTCAGAAAGGCCCTGTATTCAACGTCAGTCAGAGGACCATCATGCATGCCGGTTATCATGTAGACATCGGCCAGGGTTGGAGTCATTGGTCCGTGACCAAAGAGAAAAGCATTCATGCCATTGGACCAGAAGTGACAAGCTGCAATCAGGAGATTTTCATTCTTGGGTGTTTTGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MPELSDIMDVTLEELSEEHQQMVKAAADQFIKKCLLSFAKNRSGAPFLKSDLPRVLLPGQSDLTEEEERERFSGLLYKALGEAMTNHNAAFLNSFRHIMISIFGQHVDKSFEQIHGQLGGPTYFNVQAPVQKPHGKGNADETGASGTKDANGQPIRQDPQPALPKTRTYGDIALQRDLYGNGYSEFLDYNAIDALPNPGYVGAAGMPAGRPGSQDTNVDLMVQKMTDVLQNQFGLKPKNQGYMYSSPFPEWYQRVSLPNRVKIPTEFTKFSGQDDTSTVEHIARYLMQLGEASADEAFRIRYFPLSLTGSAFTWFASLPAQSICTWKDLEQKFHAHYYTGSTEKKLVDLTSLRQRSNETPTEFLRRFREIKGMCFSLNVPDDQLATSVKTKLTRESEIIIVKIGEPEGIGKAFEEKFKKFTDALIYRNSRSSFSISLTAFGALGFPFLVIDRGEMSAVKVNGDNLVHVQLQPHLDEPPGTIDAGNFLVGVHLINGLMEHVIDTSQEIFPERDKCACSQVFGHYYVIQSWLIGFTTENKSAQPHIQKGPVFNVSQRTIMHAGYHVDIGQGWSHWSVTKEKSIHAIGPEVTSCNQEIFILGCFG</aaseq>

Gene Sequence

<dnaseqindica>1..518#578..1215#2154..2674#2777..2908#ATGCCTGAGTTGAGCGACATCATGGACGTTACTTTGGAAGAATTATCTGAAGAGCATCAACAGATGGTAAAGGCTGCTGCTGACCAATTCATTAAAAAATGTTTACTGTCCTTTGCCAAGAACAGGAGTGGTGCACCGTTTCTCAAGTCCGATCTGCCAAGAGTTCTCCTTCCTGGGCAATCTGATCTTACTGAAGAGGAAGAAAGGGAGAGATTTTCGGGCTTGTTATACAAAGCTTTGGGGGAAGCAATGACCAATCACAATGCTGCATTCTTGAACAGCTTTCGGCATATAATGATAAGCATTTTTGGTCAACATGTGGACAAATCCTTTGAGCAGATACATGGGCAATTGGGTGGCCCGACATACTTCAATGTTCAAGCACCAGTTCAGAAACCACATGGTAAAGGGAATGCTGATGAAACTGGCGCTTCTGGTACTAAAGATGCAAATGGTCAACCGATTCGGCAAGATCCTCAGCCTGCACTGCCGAAAACTCGTACATACGGTGATATAGCGTTCGGCACCACGGGGAATCCGCCTGCTTCTGCTTACAGATATCTCCTTTGAACAATAGATTGCAGAGGGATTTATATGGGAATGGATACTCGGAGTTCCTGGACTACAATGCTATTGACGCTCTCCCGAATCCCGGGTATGTAGGTGCTGCAGGGATGCCCGCTGGAAGACCGGGGAGTCAAGACACCAATGTTGATCTCATGGTACAGAAGATGACCGATGTACTGCAAAATCAGTTCGGTCTGAAGCCCAAGAATCAGGGATACATGTACTCATCGCCTTTCCCAGAGTGGTATCAAAGGGTGTCGTTGCCGAATCGAGTCAAGATCCCCACAGAATTTACTAAATTTTCAGGGCAAGATGACACTAGTACTGTGGAACATATAGCACGGTATTTGATGCAGCTTGGAGAAGCTTCGGCAGATGAGGCCTTTAGAATCAGATACTTTCCTTTGTCGTTGACAGGTTCAGCATTCACATGGTTTGCCTCTTTGCCCGCTCAGTCAATTTGCACCTGGAAGGATCTGGAGCAGAAATTCCATGCTCATTACTATACCGGTAGTACAGAAAAGAAGTTGGTTGATCTAACCAGCTTGAGGCAAAGGAGTAATGAGACACCTACAGAGTTTCTCAGAAGATTCAGAGAGATTAAGGGCATGTGCTTCTCTCTGAACGTACCTGATGATCAGTTGGCCAGTATGGCTGTAACTGGGATGCTACCTGCAATTCGTGAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAAGAGGATAAAGTGGTGGAATTTTACCAATCACTGAAGCATCGGCAAGTTCCGTGCTAATGGCCAATTGTTGTGATTTGGCCTGAAATCATAAAGGAGTAGAAGTGAGCAGAATGAAATTAGCATTTTACTCGAGGAAGGAGATATCTGACCCGAGCGATTCTTTTGCTGCTTGTTCTTTTCTTCTTTATAGCTGAAGGGGCAGTTAGAGAAGATGTTTTCCTCTTGGCAGAAGGTGGTGCAGCAAGAATTGGATCCAGACTGGCAGGCCTGGACATTATTTGAGCTAAAGAAGGAGAAAGATGCCCCAGAATAGATATTGGGCCAGCGATGTTATATACAATTGCTCTAGCCAGATGGGCAGGGACTGTGTCCTGCAGAATAACAGAATCAAAAGTCGATGAAAGAGGGTGTTATTGGAAAAATAGATGGATTATAAGCATGTTTACCTCTGAATTCGGCTGATAATCAGGCATTAACTCAAGGCAAAGAGGGTGAACTGGTGCATTGAAGATATGATCATGGAATTCTTGCCACCAAAGGGTGAAGGAAGGATGAATGAGTGCTGTTGGCACAAAAGGGTCAGGTGCATAAATAGTGGCACAACATCTGTAATCAAAAACCCTTCTTGTTTCTGCAGAATCTTTGATGATCTGCCTCGGCCTGAGGAATTCATGGAGAAATAGTCTTGGAGGCACTTGGCCACACCCTAGTTGCCTGGCAACTATGTTCGGCTGGTAATACTCATATGAACTCTGAACCAGCCTCCCTCCACAAAATTCGGCTGGCAAGATACAGGGCCGAATGAAAGTGTTAAAAATTGCTGTGGATTGGGCATCGGTGCAGCCAGTGTCAAAACTAAACTCACAAGGGAGAGTGAGATTATCATTGTCAAGATAGGAGAACCAGAGGGGATTGGCAAAGCCTTTGAAGAAAAGTTCAAAAAGTTCACCGATGCTCTTATCTACAGAAACAGTAGAAGCAGCTTCTCCATAAGTTTGACAGCCTTTGGTGCTCTGGGCTTCCCCTTCCTGGTAATTGACCGAGGGGAAATGTCGGCTGTTAAGGTCAATGGAGACAATCTGGTGCATGTACAATTGCAGCCACATCTGGACGAACCACCAGGGACCATTGACGCAGGAAATTTTCTTGTTGGTGTGCATCTGATAAATGGTCTGATGGAGCATGTGATAGACACTTCCCAGGAGATATTTCCCGAGAGGGATAAGTGTGCCTGCAGCCAGGTCTTCGGCCATTACTATGTGATTCAGAGTTGGCTCATTGGCTTTACCACAGAAAACAAATCTGCACAGCCACATATTCAGAAAGGCCCTGTATTCAACGTCAGTCAGAGGACCATCATGCATGTAAGTCTGGATGTATCTCTTATAGCCGACTCCAGTCTTCACCCCTGTCTGTTTGGAAGAACCTTTGTACCTGTATGGATGTGTTATCCCTGTGATGTTCAGGCCGGTTATCATGTAGACATCGGCCAGGGTTGGAGTCATTGGTCCGTGACCAAAGAGAAAAGCATTCATGCCATTGGACCAGAAGTGACAAGCTGCAATCAGGAGATTTTCATTCTTGGGTGTTTTGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028975